Literature DB >> 23842951

Impact of Hardy-Weinberg disequilibrium on post-imputation quality control.

Daniel Shriner.   

Abstract

Mesh：

Year:  2013        PMID： 23842951     DOI： 10.1007/s00439-013-1336-x

Source DB:  PubMed          Journal:  Hum Genet        ISSN： 0340-6717            Impact factor:   4.132


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  6 in total

Review 1.  Genotype imputation for genome-wide association studies.

Authors:  Jonathan Marchini; Bryan Howie
Journal:  Nat Rev Genet       Date:  2010-07       Impact factor: 53.242

2.  MaCH: using sequence and genotype data to estimate haplotypes and unobserved genotypes.

Authors:  Yun Li; Cristen J Willer; Jun Ding; Paul Scheet; Gonçalo R Abecasis
Journal:  Genet Epidemiol       Date:  2010-12       Impact factor: 2.135

3.  Approximate and exact tests of Hardy-Weinberg equilibrium using uncertain genotypes.

Authors:  Daniel Shriner
Journal:  Genet Epidemiol       Date:  2011-09-15       Impact factor: 2.135

4.  Transferability and fine-mapping of genome-wide associated loci for adult height across human populations.

Authors:  Daniel Shriner; Adebowale Adeyemo; Norman P Gerry; Alan Herbert; Guanjie Chen; Ayo Doumatey; Hanxia Huang; Jie Zhou; Michael F Christman; Charles N Rotimi
Journal:  PLoS One       Date:  2009-12-22       Impact factor: 3.240

5.  An integrated map of genetic variation from 1,092 human genomes.

Authors:  Goncalo R Abecasis; Adam Auton; Lisa D Brooks; Mark A DePristo; Richard M Durbin; Robert E Handsaker; Hyun Min Kang; Gabor T Marth; Gil A McVean
Journal:  Nature       Date:  2012-11-01       Impact factor: 49.962

6.  A flexible and accurate genotype imputation method for the next generation of genome-wide association studies.

Authors:  Bryan N Howie; Peter Donnelly; Jonathan Marchini
Journal:  PLoS Genet       Date:  2009-06-19       Impact factor: 5.917
  6 in total
  5 in total

1.  A POWERFUL METHOD FOR INCLUDING GENOTYPE UNCERTAINTY IN TESTS OF HARDY-WEINBERG EQUILIBRIUM.

Authors:  Andrew Beck; Alexander Luedtke; Keli Liu; Nathan Tintle
Journal:  Pac Symp Biocomput       Date:  2017

2.  Validation of genotype imputation in Southeast Asian populations and the effect of single nucleotide polymorphism annotation on imputation outcome.

Authors:  Worachart Lert-Itthiporn; Bhoom Suktitipat; Harald Grove; Anavaj Sakuntabhai; Prida Malasit; Nattaya Tangthawornchaikul; Fumihiko Matsuda; Prapat Suriyaphol
Journal:  BMC Med Genet       Date:  2018-02-13       Impact factor: 2.103

3.  Calculating Polygenic Risk Scores (PRS) in UK Biobank: A Practical Guide for Epidemiologists.

Authors:  Jennifer A Collister; Xiaonan Liu; Lei Clifton
Journal:  Front Genet       Date:  2022-02-18       Impact factor: 4.599

4.  Iam hiQ-a novel pair of accuracy indices for imputed genotypes.

Authors:  Albert Rosenberger; Viola Tozzi; Heike Bickeböller
Journal:  BMC Bioinformatics       Date:  2022-01-24       Impact factor: 3.169

5.  When Does Choice of Accuracy Measure Alter Imputation Accuracy Assessments?

Authors:  Shelina Ramnarine; Juan Zhang; Li-Shiun Chen; Robert Culverhouse; Weimin Duan; Dana B Hancock; Sarah M Hartz; Eric O Johnson; Emily Olfson; Tae-Hwi Schwantes-An; Nancy L Saccone
Journal:  PLoS One       Date:  2015-10-12       Impact factor: 3.240
  5 in total

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