Literature DB >> 23832203

Protein expression, crystallization and preliminary X-ray crystallographic analysis of the isolated Shigella flexneri VapC toxin.

Kehan Xu1, Emil Dedic, Patricia Cob-Cantal, Christian Dienemann, Andreas Bøggild, Kristoffer S Winther, Kenn Gerdes, Ditlev E Brodersen.   

Abstract

Upon release from the stable complex formed with its antitoxin VapB, the toxin VapC (MvpT) of the Gram-negative pathogen Shigella flexneri is capable of globally down-regulating translation by specifically cleaving initiator tRNA(fMet) in the anticodon region. Recombinant Shigella flexneri VapC(D7A) harbouring an active-site mutation was overexpressed in Escherichia coli, purified to homogeneity and crystallized by the vapour-diffusion technique. A preliminary X-ray crystallographic analysis shows that the crystals diffracted to at least 1.9 Å resolution at a synchrotron X-ray source and belonged to the trigonal space group in the hexagonal setting, H3, with unit-cell parameters a = b = 120.1, c = 52.5 Å, α = β = 90, γ = 120°. The Matthews coefficient is 2.46 Å(3) Da(-1), suggesting two molecules per asymmetric unit and corresponding to a solvent content of 50.0%.

Entities:  

Keywords:  PIN domain; Shigella flexneri; VapC; ribonucleases; tRNA; toxin–antitoxin

Mesh:

Substances:

Year:  2013        PMID: 23832203      PMCID: PMC3702320          DOI: 10.1107/S1744309113014012

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  20 in total

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7.  Solvent content of protein crystals.

Authors:  B W Matthews
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9.  Crystal structure of the VapBC toxin-antitoxin complex from Shigella flexneri reveals a hetero-octameric DNA-binding assembly.

Authors:  Christian Dienemann; Andreas Bøggild; Kristoffer S Winther; Kenn Gerdes; Ditlev E Brodersen
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2.  Functional details of the Mycobacterium tuberculosis VapBC26 toxin-antitoxin system based on a structural study: insights into unique binding and antibiotic peptides.

Authors:  Sung-Min Kang; Do-Hee Kim; Ki-Young Lee; Sung Jean Park; Hye-Jin Yoon; Sang Jae Lee; Hookang Im; Bong-Jin Lee
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3.  Overexpression, purification, crystallization and preliminary X-ray crystallographic analysis of SF173 from Shigella flexneri.

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