Literature DB >> 23831290

Evolving tip structures can explain age-dependent microtubule catastrophe.

Courtney E Coombes1, Ami Yamamoto, Madeline R Kenzie, David J Odde, Melissa K Gardner.   

Abstract

Microtubules are key structural and transport elements in cells. The dynamics at microtubule ends are characterized by periods of slow growth, followed by stochastic switching events termed "catastrophes," in which microtubules suddenly undergo rapid shortening. Growing microtubules are thought to be protected from catastrophe by a GTP-tubulin "cap": GTP-tubulin subunits add to the tips of growing microtubules but are subsequently hydrolyzed to GDP-tubulin subunits once they are incorporated into the microtubule lattice. Loss of the GTP-tubulin cap exposes GDP-tubulin subunits at the microtubule tip, resulting in a catastrophe event. However, the mechanistic basis for sudden loss of the GTP cap, leading to catastrophe, is not known. To investigate microtubule catastrophe events, we performed 3D mechanochemical simulations that account for interactions between neighboring protofilaments. We found that there are two separate factors that contribute to catastrophe events in the 3D simulation: the GTP-tubulin cap size, which settles into a steady-state value that depends on the free tubulin concentration during microtubule growth, and the structure of the microtubule tip. Importantly, 3D simulations predict, and both fluorescence and electron microscopy experiments confirm, that microtubule tips become more tapered as the microtubule grows. This effect destabilizes the tip and ultimately contributes to microtubule catastrophe. Thus, the likelihood of a catastrophe event may be intimately linked to the aging physical structure of the growing microtubule tip. These results have important consequences for catastrophe regulation in cells, as microtubule-associated proteins could promote catastrophe events in part by modifying microtubule tip structures.
Copyright © 2013 Elsevier Ltd. All rights reserved.

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Year:  2013        PMID: 23831290      PMCID: PMC3762219          DOI: 10.1016/j.cub.2013.05.059

Source DB:  PubMed          Journal:  Curr Biol        ISSN: 0960-9822            Impact factor:   10.834


  32 in total

1.  History-dependent catastrophes regulate axonal microtubule behavior.

Authors:  Tatiana Stepanova; Ihor Smal; Jeffrey van Haren; Umut Akinci; Zhe Liu; Marja Miedema; Ronald Limpens; Marco van Ham; Michael van der Reijden; Raymond Poot; Frank Grosveld; Mieke Mommaas; Erik Meijering; Niels Galjart
Journal:  Curr Biol       Date:  2010-05-13       Impact factor: 10.834

2.  Dilution-induced disassembly of microtubules: relation to dynamic instability and the GTP cap.

Authors:  W A Voter; E T O'Brien; H P Erickson
Journal:  Cell Motil Cytoskeleton       Date:  1991

3.  The depolymerizing kinesin MCAK uses lattice diffusion to rapidly target microtubule ends.

Authors:  Jonne Helenius; Gary Brouhard; Yannis Kalaidzidis; Stefan Diez; Jonathon Howard
Journal:  Nature       Date:  2006-05-04       Impact factor: 49.962

4.  A theory of microtubule catastrophes and their regulation.

Authors:  Ludovic Brun; Beat Rupp; Jonathan J Ward; François Nédélec
Journal:  Proc Natl Acad Sci U S A       Date:  2009-11-30       Impact factor: 11.205

5.  Kin I kinesins are microtubule-destabilizing enzymes.

Authors:  A Desai; S Verma; T J Mitchison; C E Walczak
Journal:  Cell       Date:  1999-01-08       Impact factor: 41.582

6.  A metastable intermediate state of microtubule dynamic instability that differs significantly between plus and minus ends.

Authors:  P T Tran; R A Walker; E D Salmon
Journal:  J Cell Biol       Date:  1997-07-14       Impact factor: 10.539

7.  Regulation of microtubule dynamics by Bim1 and Bik1, the budding yeast members of the EB1 and CLIP-170 families of plus-end tracking proteins.

Authors:  Kristina A Blake-Hodek; Lynne Cassimeris; Tim C Huffaker
Journal:  Mol Biol Cell       Date:  2010-04-14       Impact factor: 4.138

8.  Evidence that a single monolayer tubulin-GTP cap is both necessary and sufficient to stabilize microtubules.

Authors:  M Caplow; J Shanks
Journal:  Mol Biol Cell       Date:  1996-04       Impact factor: 4.138

9.  Dynamic instability of individual microtubules analyzed by video light microscopy: rate constants and transition frequencies.

Authors:  R A Walker; E T O'Brien; N K Pryer; M F Soboeiro; W A Voter; H P Erickson; E D Salmon
Journal:  J Cell Biol       Date:  1988-10       Impact factor: 10.539

10.  Dilution of individual microtubules observed in real time in vitro: evidence that cap size is small and independent of elongation rate.

Authors:  R A Walker; N K Pryer; E D Salmon
Journal:  J Cell Biol       Date:  1991-07       Impact factor: 10.539

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  58 in total

1.  Molecular and Mechanical Causes of Microtubule Catastrophe and Aging.

Authors:  Pavel Zakharov; Nikita Gudimchuk; Vladimir Voevodin; Alexander Tikhonravov; Fazoil I Ataullakhanov; Ekaterina L Grishchuk
Journal:  Biophys J       Date:  2015-12-15       Impact factor: 4.033

2.  Aging Gracefully: A New Model of Microtubule Growth and Catastrophe.

Authors:  William O Hancock
Journal:  Biophys J       Date:  2015-12-15       Impact factor: 4.033

3.  Biased Brownian motion as a mechanism to facilitate nanometer-scale exploration of the microtubule plus end by a kinesin-8.

Authors:  Yongdae Shin; Yaqing Du; Scott E Collier; Melanie D Ohi; Matthew J Lang; Ryoma Ohi
Journal:  Proc Natl Acad Sci U S A       Date:  2015-07-06       Impact factor: 11.205

4.  Microtubules in plants.

Authors:  Takashi Hashimoto
Journal:  Arabidopsis Book       Date:  2015-04-27

5.  Direct observation of individual tubulin dimers binding to growing microtubules.

Authors:  Keith J Mickolajczyk; Elisabeth A Geyer; Tae Kim; Luke M Rice; William O Hancock
Journal:  Proc Natl Acad Sci U S A       Date:  2019-02-25       Impact factor: 11.205

6.  Watching microtubules grow one tubulin at a time.

Authors:  Nikita Gudimchuk; Antonina Roll-Mecak
Journal:  Proc Natl Acad Sci U S A       Date:  2019-03-25       Impact factor: 11.205

Review 7.  Microtubules and Microtubule-Associated Proteins.

Authors:  Holly V Goodson; Erin M Jonasson
Journal:  Cold Spring Harb Perspect Biol       Date:  2018-06-01       Impact factor: 10.005

Review 8.  Microtubule Destabilization Paves the Way to Parkinson's Disease.

Authors:  D Cartelli; G Cappelletti
Journal:  Mol Neurobiol       Date:  2016-10-18       Impact factor: 5.590

Review 9.  Rescuing microtubules from the brink of catastrophe: CLASPs lead the way.

Authors:  E J Lawrence; M Zanic
Journal:  Curr Opin Cell Biol       Date:  2018-11-16       Impact factor: 8.382

Review 10.  Regulation of Microtubule Growth and Catastrophe: Unifying Theory and Experiment.

Authors:  Hugo Bowne-Anderson; Anneke Hibbel; Jonathon Howard
Journal:  Trends Cell Biol       Date:  2015-12       Impact factor: 20.808

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