Literature DB >> 23825200

Adaptation of molecular circadian clockwork to environmental changes: a role for alternative splicing and miRNAs.

Osnat Bartok1, Charalambos P Kyriacou, Joel Levine, Amita Sehgal, Sebastian Kadener.   

Abstract

Circadian (24 h) clocks provide a source of internal timing in most living organisms. These clocks keep time by using complex transcriptional/post-translational feedback loops that are strikingly resilient to changes in environmental conditions. In the last few years, interest has increased in the role of post-transcriptional regulation of circadian clock components. Post-transcriptional control plays a prominent role in modulating rapid responses of the circadian system to environmental changes, including light, temperature and general stress and will be the focus of this review.

Entities:  

Keywords:  circadian clock; environment; post-transcriptional regulation

Mesh:

Substances:

Year:  2013        PMID: 23825200      PMCID: PMC3712432          DOI: 10.1098/rspb.2013.0011

Source DB:  PubMed          Journal:  Proc Biol Sci        ISSN: 0962-8452            Impact factor:   5.349


  63 in total

1.  The evolutionary fate and consequences of duplicate genes.

Authors:  M Lynch; J S Conery
Journal:  Science       Date:  2000-11-10       Impact factor: 47.728

Review 2.  Transcriptional feedback oscillators: maybe, maybe not...

Authors:  Patricia L Lakin-Thomas
Journal:  J Biol Rhythms       Date:  2006-04       Impact factor: 3.182

3.  Long and short isoforms of Neurospora clock protein FRQ support temperature-compensated circadian rhythms.

Authors:  Axel Diernfellner; Hildur V Colot; Orfeas Dintsis; Jennifer J Loros; Jay C Dunlap; Michael Brunner
Journal:  FEBS Lett       Date:  2007-11-26       Impact factor: 4.124

Review 4.  Post-transcriptional control of circadian rhythms.

Authors:  Shihoko Kojima; Danielle L Shingle; Carla B Green
Journal:  J Cell Sci       Date:  2011-02-01       Impact factor: 5.285

5.  Coupled oscillators control morning and evening locomotor behaviour of Drosophila.

Authors:  Dan Stoleru; Ying Peng; José Agosto; Michael Rosbash
Journal:  Nature       Date:  2004-10-14       Impact factor: 49.962

6.  Molecular mechanism of temperature sensing by the circadian clock of Neurospora crassa.

Authors:  Axel C R Diernfellner; Tobias Schafmeier; Martha W Merrow; Michael Brunner
Journal:  Genes Dev       Date:  2005-08-17       Impact factor: 11.361

Review 7.  Post-translational modifications in circadian rhythms.

Authors:  Arun Mehra; Christopher L Baker; Jennifer J Loros; Jay C Dunlap
Journal:  Trends Biochem Sci       Date:  2009-09-07       Impact factor: 13.807

8.  Alternative splicing mediates responses of the Arabidopsis circadian clock to temperature changes.

Authors:  Allan B James; Naeem Hasan Syed; Simon Bordage; Jacqueline Marshall; Gillian A Nimmo; Gareth I Jenkins; Pawel Herzyk; John W S Brown; Hugh G Nimmo
Journal:  Plant Cell       Date:  2012-03-09       Impact factor: 11.277

9.  The oscillating miRNA 959-964 cluster impacts Drosophila feeding time and other circadian outputs.

Authors:  Sadanand Vodala; Stefan Pescatore; Joseph Rodriguez; Marita Buescher; Ya-Wen Chen; Ruifen Weng; Stephen M Cohen; Michael Rosbash
Journal:  Cell Metab       Date:  2012-11-01       Impact factor: 27.287

10.  The LARK RNA-binding protein selectively regulates the circadian eclosion rhythm by controlling E74 protein expression.

Authors:  Yanmei Huang; Ginka Genova; Mary Roberts; F Rob Jackson
Journal:  PLoS One       Date:  2007-10-31       Impact factor: 3.240

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  16 in total

1.  Animal clocks: when science meets nature.

Authors:  Noga Kronfeld-Schor; Guy Bloch; William J Schwartz
Journal:  Proc Biol Sci       Date:  2013-07-03       Impact factor: 5.349

2.  Thermosensitive alternative splicing senses and mediates temperature adaptation in Drosophila.

Authors:  Ane Martin Anduaga; Naveh Evantal; Ines Lucia Patop; Osnat Bartok; Ron Weiss; Sebastian Kadener
Journal:  Elife       Date:  2019-11-08       Impact factor: 8.140

3.  PERIOD-controlled deadenylation of the timeless transcript in the Drosophila circadian clock.

Authors:  Brigitte Grima; Christian Papin; Béatrice Martin; Elisabeth Chélot; Prishila Ponien; Eric Jacquet; François Rouyer
Journal:  Proc Natl Acad Sci U S A       Date:  2019-03-04       Impact factor: 11.205

4.  Function and evolution of microRNAs in eusocial Hymenoptera.

Authors:  Eirik Søvik; Guy Bloch; Yehuda Ben-Shahar
Journal:  Front Genet       Date:  2015-05-27       Impact factor: 4.599

5.  Improved statistical methods enable greater sensitivity in rhythm detection for genome-wide data.

Authors:  Alan L Hutchison; Mark Maienschein-Cline; Andrew H Chiang; S M Ali Tabei; Herman Gudjonson; Neil Bahroos; Ravi Allada; Aaron R Dinner
Journal:  PLoS Comput Biol       Date:  2015-03-20       Impact factor: 4.475

Review 6.  Systems Biology-Derived Discoveries of Intrinsic Clocks.

Authors:  Arthur Millius; Hiroki R Ueda
Journal:  Front Neurol       Date:  2017-02-06       Impact factor: 4.003

Review 7.  Posttranscriptional methylation of transfer and ribosomal RNA in stress response pathways, cell differentiation, and cancer.

Authors:  Martyna C Popis; Sandra Blanco; Michaela Frye
Journal:  Curr Opin Oncol       Date:  2016-01       Impact factor: 3.645

8.  A Natural Light/Dark Cycle Regulation of Carbon-Nitrogen Metabolism and Gene Expression in Rice Shoots.

Authors:  Haixing Li; Zhijun Liang; Guangda Ding; Lei Shi; Fangsen Xu; Hongmei Cai
Journal:  Front Plant Sci       Date:  2016-08-30       Impact factor: 5.753

Review 9.  Emerging roles for microRNA in the regulation of Drosophila circadian clock.

Authors:  Yongbo Xue; Yong Zhang
Journal:  BMC Neurosci       Date:  2018-01-16       Impact factor: 3.288

10.  The Interplay of Temperature and Genotype on Patterns of Alternative Splicing in Drosophila melanogaster.

Authors:  Ana Marija Jakšić; Christian Schlötterer
Journal:  Genetics       Date:  2016-07-20       Impact factor: 4.402

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