Literature DB >> 23822503

Context-dependent transcriptional interpretation of mitogen activated protein kinase signaling in the Drosophila embryo.

Yoosik Kim1, Antonina Iagovitina, Keisuke Ishihara, Kate M Fitzgerald, Bart Deplancke, Dmitri Papatsenko, Stanislav Y Shvartsman.   

Abstract

Terminal regions of the Drosophila embryo are patterned by the localized activation of Mitogen Activated Protein Kinase (MAPK), which induces zygotic genes through relief of their repression by transcriptional repressor Capicua. The levels of MAPK activation at the anterior and posterior termini are close to each other, but the expression patterns of MAPK-target genes, such as zerknüllt (zen) and tailless (tll), display strong anterior-posterior (AP) asymmetry. This region-specific response to MAPK activation provides a clear example of context-dependent interpretation of inductive signaling, a common developmental effect that remains poorly understood. In the past, the AP asymmetry of zen expression was attributed to a mechanism that depends on MAPK substrate competition. We present data suggesting that the asymmetric expression of tll is generated by a different mechanism, based on feedforward control and multiple enhancers of the tll gene. A simple mathematical model of this mechanism correctly predicts how the wild-type expression pattern of tll changes in mutants affecting the anterior, dorsoventral, and terminal patterning systems and some of their direct targets.

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Year:  2013        PMID: 23822503      PMCID: PMC3689791          DOI: 10.1063/1.4808157

Source DB:  PubMed          Journal:  Chaos        ISSN: 1054-1500            Impact factor:   3.642


  56 in total

1.  Relief of gene repression by torso RTK signaling: role of capicua in Drosophila terminal and dorsoventral patterning.

Authors:  G Jiménez; A Guichet; A Ephrussi; J Casanova
Journal:  Genes Dev       Date:  2000-01-15       Impact factor: 11.361

2.  Ras pathway specificity is determined by the integration of multiple signal-activated and tissue-restricted transcription factors.

Authors:  M S Halfon; A Carmena; S Gisselbrecht; C M Sackerson; F Jiménez; M K Baylies; A M Michelson
Journal:  Cell       Date:  2000-09-29       Impact factor: 41.582

Review 3.  Receptor tyrosine kinases: specific outcomes from general signals.

Authors:  M A Simon
Journal:  Cell       Date:  2000-09-29       Impact factor: 41.582

Review 4.  Transcriptional repression: the long and the short of it.

Authors:  A J Courey; S Jia
Journal:  Genes Dev       Date:  2001-11-01       Impact factor: 11.361

Review 5.  Dorsal gradient networks in the Drosophila embryo.

Authors:  Angelike Stathopoulos; Michael Levine
Journal:  Dev Biol       Date:  2002-06-01       Impact factor: 3.582

6.  Whole-genome analysis of dorsal-ventral patterning in the Drosophila embryo.

Authors:  Angelike Stathopoulos; Madeleine Van Drenth; Albert Erives; Michele Markstein; Michael Levine
Journal:  Cell       Date:  2002-11-27       Impact factor: 41.582

7.  Bicoid--morphogen function revisited.

Authors:  Ulrike Löhr; Ho-Ryun Chung; Mathias Beller; Herbert Jäckle
Journal:  Fly (Austin)       Date:  2010-07-01       Impact factor: 2.160

8.  Extraction of functional binding sites from unique regulatory regions: the Drosophila early developmental enhancers.

Authors:  Dmitri A Papatsenko; Vsevolod J Makeev; Alex P Lifanov; Mireille Régnier; Anna G Nazina; Claude Desplan
Journal:  Genome Res       Date:  2002-03       Impact factor: 9.043

9.  Transcriptional regulation of cytoskeletal functions and segmentation by a novel maternal pair-rule gene, lilliputian.

Authors:  A H Tang; T P Neufeld; G M Rubin; H A Müller
Journal:  Development       Date:  2001-03       Impact factor: 6.868

10.  spalt-dependent switching between two cell fates that are induced by the Drosophila EGF receptor.

Authors:  P R Elstob; V Brodu; A P Gould
Journal:  Development       Date:  2001-03       Impact factor: 6.868

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  7 in total

1.  Metabolic Regulation of Developmental Cell Cycles and Zygotic Transcription.

Authors:  Nareg J-V Djabrayan; Celia M Smits; Matej Krajnc; Tomer Stern; Shigehiro Yamada; William C Lemon; Philipp J Keller; Christine A Rushlow; Stanislav Y Shvartsman
Journal:  Curr Biol       Date:  2019-03-14       Impact factor: 10.834

2.  Morphogenesis at criticality.

Authors:  Dmitry Krotov; Julien O Dubuis; Thomas Gregor; William Bialek
Journal:  Proc Natl Acad Sci U S A       Date:  2014-02-10       Impact factor: 11.205

3.  Mapping the binding interface of ERK and transcriptional repressor Capicua using photocrosslinking.

Authors:  Alan S Futran; Saw Kyin; Stanislav Y Shvartsman; A James Link
Journal:  Proc Natl Acad Sci U S A       Date:  2015-06-29       Impact factor: 11.205

4.  Divergent effects of intrinsically active MEK variants on developmental Ras signaling.

Authors:  Yogesh Goyal; Granton A Jindal; José L Pelliccia; Kei Yamaya; Eyan Yeung; Alan S Futran; Rebecca D Burdine; Trudi Schüpbach; Stanislav Y Shvartsman
Journal:  Nat Genet       Date:  2017-02-06       Impact factor: 38.330

5.  Broadly expressed repressors integrate patterning across orthogonal axes in embryos.

Authors:  Theodora Koromila; Angelike Stathopoulos
Journal:  Proc Natl Acad Sci U S A       Date:  2017-07-18       Impact factor: 11.205

6.  Comparative transcriptome analysis of isogenic cell line models and primary cancers links capicua (CIC) loss to activation of the MAPK signalling cascade.

Authors:  Veronique G LeBlanc; Marlo Firme; Jungeun Song; Susanna Y Chan; Min Hye Lee; Stephen Yip; Suganthi Chittaranjan; Marco A Marra
Journal:  J Pathol       Date:  2017-04-26       Impact factor: 7.996

7.  Temporal and spatial dynamics of scaling-specific features of a gene regulatory network in Drosophila.

Authors:  Honggang Wu; Renjie Jiao; Jun Ma
Journal:  Nat Commun       Date:  2015-12-08       Impact factor: 14.919

  7 in total

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