Literature DB >> 23818662

Immunoblotting histones from yeast whole-cell protein extracts.

Marlies P Rossmann1, Bruce Stillman.   

Abstract

Histones are small basic proteins that are core components of chromatin. As such, they are essential for cell viability and genomic stability and their levels are tightly controlled. In addition, histone tails are subject to extensive posttranslational modifications, including acetylation, methylation, phosphorylation and ubiquitylation, that play critical roles in many cellular processes. To quickly screen for alterations in histone levels and/or their modifications in yeast mutants under different growth conditions, we present a fast and reliable protocol for whole-cell protein extract preparation and immunoblotting.

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Year:  2013        PMID: 23818662      PMCID: PMC4085693          DOI: 10.1101/pdb.prot067116

Source DB:  PubMed          Journal:  Cold Spring Harb Protoc        ISSN: 1559-6095


  9 in total

1.  The Paf1 complex is essential for histone monoubiquitination by the Rad6-Bre1 complex, which signals for histone methylation by COMPASS and Dot1p.

Authors:  Adam Wood; Jessica Schneider; Jim Dover; Mark Johnston; Ali Shilatifard
Journal:  J Biol Chem       Date:  2003-07-21       Impact factor: 5.157

2.  Extraction, purification and analysis of histones.

Authors:  David Shechter; Holger L Dormann; C David Allis; Sandra B Hake
Journal:  Nat Protoc       Date:  2007       Impact factor: 13.491

3.  Repression domain of the yeast global repressor Tup1 interacts directly with histones H3 and H4.

Authors:  D G Edmondson; M M Smith; S Y Roth
Journal:  Genes Dev       Date:  1996-05-15       Impact factor: 11.361

4.  Effects of the modification of transfer buffer composition and the renaturation of proteins in gels on the recognition of proteins on Western blots by monoclonal antibodies.

Authors:  S D Dunn
Journal:  Anal Biochem       Date:  1986-08-15       Impact factor: 3.365

5.  A method for the efficient blotting of strongly basic proteins from sodium dodecyl sulfate-polyacrylamide gels to nitrocellulose.

Authors:  B Szewczyk; L M Kozloff
Journal:  Anal Biochem       Date:  1985-11-01       Impact factor: 3.365

6.  Accelerated nuclei preparation and methods for analysis of histone modifications in yeast.

Authors:  Kelby O Kizer; Tiaojiang Xiao; Brian D Strahl
Journal:  Methods       Date:  2006-12       Impact factor: 3.608

7.  Rapid and reliable protein extraction from yeast.

Authors:  V V Kushnirov
Journal:  Yeast       Date:  2000-06-30       Impact factor: 3.239

8.  Histone modifications in the yeast S. Cerevisiae.

Authors:  J R Davie; C A Saunders; J M Walsh; S C Weber
Journal:  Nucleic Acids Res       Date:  1981-07-10       Impact factor: 16.971

9.  Proliferating cell nuclear antigen and ASF1 modulate silent chromatin in Saccharomyces cerevisiae via lysine 56 on histone H3.

Authors:  Andrew Miller; Bo Yang; Tiaunn Foster; Ann L Kirchmaier
Journal:  Genetics       Date:  2008-06       Impact factor: 4.562

  9 in total
  4 in total

1.  Constraints and consequences of the emergence of amino acid repeats in eukaryotic proteins.

Authors:  Sreenivas Chavali; Pavithra L Chavali; Guilhem Chalancon; Natalia Sanchez de Groot; Rita Gemayel; Natasha S Latysheva; Elizabeth Ing-Simmons; Kevin J Verstrepen; Santhanam Balaji; M Madan Babu
Journal:  Nat Struct Mol Biol       Date:  2017-08-14       Impact factor: 15.369

2.  The AAA-ATPase molecular chaperone Cdc48/p97 disassembles sumoylated centromeres, decondenses heterochromatin, and activates ribosomal RNA genes.

Authors:  Zsuzsanna Mérai; Nina Chumak; Marcelina García-Aguilar; Tzung-Fu Hsieh; Toshiro Nishimura; Vera K Schoft; János Bindics; Lucyna Slusarz; Stéphanie Arnoux; Susanne Opravil; Karl Mechtler; Daniel Zilberman; Robert L Fischer; Hisashi Tamaru
Journal:  Proc Natl Acad Sci U S A       Date:  2014-10-24       Impact factor: 11.205

3.  Methylation of histone H3 at lysine 37 by Set1 and Set2 prevents spurious DNA replication.

Authors:  Helena Santos-Rosa; Gonzalo Millán-Zambrano; Namshik Han; Tommaso Leonardi; Marie Klimontova; Simona Nasiscionyte; Luca Pandolfini; Kostantinos Tzelepis; Till Bartke; Tony Kouzarides
Journal:  Mol Cell       Date:  2021-05-11       Impact factor: 19.328

4.  Sex-dependent acrolein sensitivity in mice is associated with differential lung cell, protein, and transcript changes.

Authors:  Kiflai Bein; Rahel L Birru; Heather Wells; Theodore P Larkin; Tengziyi Ge; George D Leikauf
Journal:  Physiol Rep       Date:  2021-10
  4 in total

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