Literature DB >> 23813247

Analysis of the biological and molecular variability of the Polish isolates of Tomato black ring virus (TBRV).

N Rymelska1, N Borodynko, H Pospieszny, B Hasiów-Jaroszewska.   

Abstract

Tomato black ring virus (TBRV) is an important pathogen infecting many plant species worldwide. The biological and molecular variability of the Polish isolates of TBRV was analyzed. The analysis was performed based on the symptoms induced by various isolates on test plant species as well as on phylogenetic relationships between isolates. Isolates differed in their host range and symptomatology. In addition, genetic variation among isolates was characterized by restriction fragment length polymorphism analysis and confirmed by sequencing. The phylogenetic analysis revealed that the Polish isolates differ from each other and do not form a monophyletic cluster. Finally, we identified and analyzed sequences of defective RNA forms arising from the TBRV genome.

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Year:  2013        PMID： 23813247     DOI： 10.1007/s11262-013-0941-z

Source DB:  PubMed          Journal:  Virus Genes        ISSN： 0920-8569            Impact factor:   2.332


  23 in total

1.  Mechanism of DI RNA formation in tombusviruses: dissecting the requirement for primer extension by the tombusvirus RNA dependent RNA polymerase in vitro.

Authors:  C-P Cheng; J Pogany; P D Nagy
Journal:  Virology       Date:  2002-12-20       Impact factor: 3.616

2.  Transmission of a strain of tomato black ring virus by Longidorus elongatus (Nematoda).

Authors:  B D HARRISON; W P MOWAT; C E TAYLOR
Journal:  Virology       Date:  1961-08       Impact factor: 3.616

3.  Detection of Tomato black ring virus by real-time one-step RT-PCR.

Authors:  Scott J Harper; Catia Delmiglio; Lisa I Ward; Gerard R G Clover
Journal:  J Virol Methods       Date:  2010-10-27       Impact factor: 2.014

4.  MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods.

Authors:  Koichiro Tamura; Daniel Peterson; Nicholas Peterson; Glen Stecher; Masatoshi Nei; Sudhir Kumar
Journal:  Mol Biol Evol       Date:  2011-05-04       Impact factor: 16.240

5.  Characteristics of the microplate method of enzyme-linked immunosorbent assay for the detection of plant viruses.

Authors:  M F Clark; A N Adams
Journal:  J Gen Virol       Date:  1977-03       Impact factor: 3.891

6.  Analysis of the in vitro cleavage products of the tomato black ring virus RNA-1-encoded 250K polyprotein.

Authors:  G Demangeat; C Greif; O Hemmer; C Fritsch
Journal:  J Gen Virol       Date:  1990-08       Impact factor: 3.891

7.  De novo generation of defective interfering-like RNAs in broad bean mottle bromovirus.

Authors:  J Pogany; J Romero; Q Huang; J Y Sgro; H Shang; J J Bujarski
Journal:  Virology       Date:  1995-10-01       Impact factor: 3.616

8.  Defective interfering RNAs of a satellite virus.

Authors:  W Qiu; K B Scholthof
Journal:  J Virol       Date:  2001-06       Impact factor: 5.103

9.  A defective interfering RNA that contains a mosaic of a plant virus genome.

Authors:  B I Hillman; J C Carrington; T J Morris
Journal:  Cell       Date:  1987-11-06       Impact factor: 41.582

10.  In vitro processing of the RNA-2-encoded polyprotein of two nepoviruses: tomato black ring virus and grapevine chrome mosaic virus.

Authors:  G Demangeat; O Hemmer; C Fritsch; O Le Gall; T Candresse
Journal:  J Gen Virol       Date:  1991-02       Impact factor: 3.891
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  5 in total

1.  The sequencing of the complete genome of a Tomato black ring virus (TBRV) and of the RNA2 of three Grapevine chrome mosaic virus (GCMV) isolates from grapevine reveals the possible recombinant origin of GCMV.

Authors:  M Digiaro; E Yahyaoui; G P Martelli; T Elbeaino
Journal:  Virus Genes       Date:  2014-10-15       Impact factor: 2.332

2.  Identification of Tomato black ring virus from tomato plants grown in greenhouses in Saudi Arabia.

Authors:  Anas Mohammed Al-Shudifat; Ibrahim Mohammed Al-Shahwan; Mohammad Ali Al-Saleh; Omer Ahmed Abdalla; Mahmoud Ahmed Amer
Journal:  Saudi J Biol Sci       Date:  2021-01-28       Impact factor: 4.219

3.  Genetic Diversity of Tomato Black Ring Virus Satellite RNAs and Their Impact on Virus Replication.

Authors:  Julia Minicka; Agnieszka Taberska; Aleksandra Zarzyńska-Nowak; Katarzyna Kubska; Daria Budzyńska; Santiago F Elena; Beata Hasiów-Jaroszewska
Journal:  Int J Mol Sci       Date:  2022-08-20       Impact factor: 6.208

Review 4.  Global Advances in Tomato Virome Research: Current Status and the Impact of High-Throughput Sequencing.

Authors:  Mark Paul Selda Rivarez; Ana Vučurović; Nataša Mehle; Maja Ravnikar; Denis Kutnjak
Journal:  Front Microbiol       Date:  2021-05-21       Impact factor: 5.640

Review 5.  Metagenomic Studies of Viruses in Weeds and Wild Plants: A Powerful Approach to Characterise Variable Virus Communities.

Authors:  Beata Hasiów-Jaroszewska; Dieke Boezen; Mark P Zwart
Journal:  Viruses       Date:  2021-09-27       Impact factor: 5.048
  5 in total

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