Literature DB >> 23804441

Numerical metrics for automated quantification of interstitial cell of Cajal network structural properties.

Jerry Gao1, Peng Du, Greg O'Grady, Rosalind Archer, Gianrico Farrugia, Simon J Gibbons, Leo K Cheng.   

Abstract

Depletion of interstitial cells of Cajal (ICC) networks is known to occur in several gastrointestinal motility disorders. Although confocal microscopy can effectively image and visualize the spatial distribution of ICC networks, current descriptors of ICC depletion are limited to cell numbers and volume computations. Spatial changes in ICC network structural properties have not been quantified. Given that ICC generate electrical signals, the organization of a network may also affect physiology. In this study, six numerical metrics were formulated to automatically determine complex ICC network structural properties from confocal images: density, thickness, hole size, contact ratio, connectivity and anisotropy. These metrics were validated and applied in proof-of-concept studies to quantitatively determine jejunal ICC network changes in mouse models with decreased (5-HT2B receptor knockout (KO)) and normal (Ano1 KO) ICC numbers, and during post-natal network maturation. Results revealed a novel remodelling phenomenon occurring during ICC depletion, namely a spatial rearrangement of ICC and the preferential longitudinal alignment. In the post-natal networks, an apparent pruning of the ICC network was demonstrated. The metrics developed here enabled the first detailed quantitative analyses of structural changes that may occur in ICC networks during depletion and development.

Entities:  

Keywords:  confocal microscopy; maturation; post-natal; pruning; remodelling

Mesh:

Substances:

Year:  2013        PMID: 23804441      PMCID: PMC3730694          DOI: 10.1098/rsif.2013.0421

Source DB:  PubMed          Journal:  J R Soc Interface        ISSN: 1742-5662            Impact factor:   4.118


  40 in total

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Journal:  Dev Dyn       Date:  1998-01       Impact factor: 3.780

2.  3-D illustration of network orientations of interstitial cells of Cajal subgroups in human colon as revealed by deep-tissue imaging with optical clearing.

Authors:  Yuan-An Liu; Yuan-Chiang Chung; Shien-Tung Pan; Yung-Chi Hou; Shih-Jung Peng; Pankaj J Pasricha; Shiue-Cheng Tang
Journal:  Am J Physiol Gastrointest Liver Physiol       Date:  2012-03-15       Impact factor: 4.052

3.  Pathways of slow-wave propagation in proximal colon of cats.

Authors:  J L Conklin; C Du
Journal:  Am J Physiol       Date:  1990-06

4.  Interstitial cells of Cajal mediate inhibitory neurotransmission in the stomach.

Authors:  A J Burns; A E Lomax; S Torihashi; K M Sanders; S M Ward
Journal:  Proc Natl Acad Sci U S A       Date:  1996-10-15       Impact factor: 11.205

5.  Neuronal regulation: A mechanism for synaptic pruning during brain maturation.

Authors:  G Chechik; I Meilijson; E Ruppin
Journal:  Neural Comput       Date:  1999-11-15       Impact factor: 2.026

6.  Rapid high-amplitude circumferential slow wave propagation during normal gastric pacemaking and dysrhythmias.

Authors:  G O'Grady; P Du; N Paskaranandavadivel; T R Angeli; W J E P Lammers; S J Asirvatham; J A Windsor; G Farrugia; A J Pullan; L K Cheng
Journal:  Neurogastroenterol Motil       Date:  2012-07       Impact factor: 3.598

7.  Loss of interstitial cells of cajal and inhibitory innervation in insulin-dependent diabetes.

Authors:  C L He; E E Soffer; C D Ferris; R M Walsh; J H Szurszewski; G Farrugia
Journal:  Gastroenterology       Date:  2001-08       Impact factor: 22.682

8.  Cellular changes in diabetic and idiopathic gastroparesis.

Authors:  Madhusudan Grover; Gianrico Farrugia; Matthew S Lurken; Cheryl E Bernard; Maria Simonetta Faussone-Pellegrini; Thomas C Smyrk; Henry P Parkman; Thomas L Abell; William J Snape; William L Hasler; Aynur Ünalp-Arida; Linda Nguyen; Kenneth L Koch; Jorges Calles; Linda Lee; James Tonascia; Frank A Hamilton; Pankaj J Pasricha
Journal:  Gastroenterology       Date:  2011-02-04       Impact factor: 22.682

9.  Ano1 is a selective marker of interstitial cells of Cajal in the human and mouse gastrointestinal tract.

Authors:  Pedro J Gomez-Pinilla; Simon J Gibbons; Michael R Bardsley; Andrea Lorincz; Maria J Pozo; Pankaj J Pasricha; Matt Van de Rijn; Robert B West; Michael G Sarr; Michael L Kendrick; Robert R Cima; Eric J Dozois; David W Larson; Tamas Ordog; Gianrico Farrugia
Journal:  Am J Physiol Gastrointest Liver Physiol       Date:  2009-04-16       Impact factor: 4.052

10.  Biophysically based modeling of the interstitial cells of cajal: current status and future perspectives.

Authors:  Rachel Lees-Green; Peng Du; Gregory O'Grady; Arthur Beyder; Gianrico Farrugia; Andrew J Pullan
Journal:  Front Physiol       Date:  2011-07-04       Impact factor: 4.566

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  12 in total

1.  A Stochastic Algorithm for Generating Realistic Virtual Interstitial Cell of Cajal Networks.

Authors:  Jerry Gao; Shameer Sathar; Gregory O'Grady; Rosalind Archer; Leo K Cheng
Journal:  IEEE Trans Biomed Eng       Date:  2015-03-13       Impact factor: 4.538

2.  Developmental changes in postnatal murine intestinal interstitial cell of Cajal network structure and function.

Authors:  Jerry Gao; Shameer Sathar; Gregory O'Grady; Juan Han; Leo K Cheng
Journal:  Ann Biomed Eng       Date:  2014-05-28       Impact factor: 3.934

3.  Recent progress in gastric arrhythmia: pathophysiology, clinical significance and future horizons.

Authors:  Gregory O'Grady; Tim H-H Wang; Peng Du; Tim Angeli; Wim J E P Lammers; Leo K Cheng
Journal:  Clin Exp Pharmacol Physiol       Date:  2014-10       Impact factor: 2.557

4.  A Multiscale Tridomain Model for Simulating Bioelectric Gastric Pacing.

Authors:  Shameer Sathar; Mark L Trew; Greg OGrady; Leo K Cheng
Journal:  IEEE Trans Biomed Eng       Date:  2015-06-11       Impact factor: 4.538

5.  Tissue specific simulations of interstitial cells of cajal networks using unstructured meshes.

Authors:  Shameer Sathar; Mark L Trew; Leo K Cheng
Journal:  Conf Proc IEEE Eng Med Biol Soc       Date:  2015

Review 6.  The virtual intestine: in silico modeling of small intestinal electrophysiology and motility and the applications.

Authors:  Peng Du; Niranchan Paskaranandavadivel; Timothy R Angeli; Leo K Cheng; Gregory O'Grady
Journal:  Wiley Interdiscip Rev Syst Biol Med       Date:  2015-11-12

Review 7.  Do we understand any more about bladder interstitial cells?-ICI-RS 2013.

Authors:  Anthony Kanai; Christopher Fry; Ann Hanna-Mitchell; Lori Birder; Irina Zabbarova; Dominika Bijos; Youko Ikeda
Journal:  Neurourol Urodyn       Date:  2014-05-16       Impact factor: 2.696

Review 8.  Mechanisms of Electrical Activation and Conduction in the Gastrointestinal System: Lessons from Cardiac Electrophysiology.

Authors:  Gary Tse; Eric Tsz Him Lai; Jie Ming Yeo; Vivian Tse; Sunny Hei Wong
Journal:  Front Physiol       Date:  2016-05-31       Impact factor: 4.566

Review 9.  Current applications of mathematical models of the interstitial cells of Cajal in the gastrointestinal tract.

Authors:  Sue Ann Mah; Recep Avci; Leo K Cheng; Peng Du
Journal:  WIREs Mech Dis       Date:  2020-10-07

10.  Are interstitial cells of Cajal involved in mechanical stress-induced gene expression and impairment of smooth muscle contractility in bowel obstruction?

Authors:  Chester C Wu; You-Min Lin; Jerry Gao; John H Winston; Leo K Cheng; Xuan-Zheng Shi
Journal:  PLoS One       Date:  2013-09-30       Impact factor: 3.240

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