Literature DB >> 26562482

The virtual intestine: in silico modeling of small intestinal electrophysiology and motility and the applications.

Peng Du1, Niranchan Paskaranandavadivel1, Timothy R Angeli1, Leo K Cheng1, Gregory O'Grady1.   

Abstract

The intestine comprises a long hollow muscular tube organized in anatomically and functionally discrete compartments, which digest and absorb nutrients and water from ingested food. The intestine also plays key roles in the elimination of waste and protection from infection. Critical to all of these functions is the intricate, highly coordinated motion of the intestinal tract, known as motility, which is coregulated by hormonal, neural, electrophysiological and other factors. The Virtual Intestine encapsulates a series of mathematical models of intestinal function in health and disease, with a current focus on motility, and particularly electrophysiology. The Virtual Intestine is being cohesively established across multiple physiological scales, from sub/cellular functions to whole organ levels, facilitating quantitative evaluations that present an integrative in silico framework. The models are also now finding broad physiological applications, including in evaluating hypotheses of slow wave pacemaker mechanisms, smooth muscle electrophysiology, structure-function relationships, and electromechanical coupling. Clinical applications are also beginning to follow, including in the pathophysiology of motility disorders, diagnosing intestinal ischemia, and visualizing colonic dysfunction. These advances illustrate the emerging potential of the Virtual Intestine to effectively address multiscale research challenges in interdisciplinary gastrointestinal sciences.
© 2015 Wiley Periodicals, Inc.

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Year:  2015        PMID: 26562482      PMCID: PMC5097873          DOI: 10.1002/wsbm.1324

Source DB:  PubMed          Journal:  Wiley Interdiscip Rev Syst Biol Med        ISSN: 1939-005X


  117 in total

1.  High-definition spatiotemporal mapping of contractile activity in the isolated proximal colon of the rabbit.

Authors:  Roger G Lentle; Patrick W M Janssen; Patchana Asvarujanon; Paul Chambers; Kevin J Stafford; Yacine Hemar
Journal:  J Comp Physiol B       Date:  2007-10-19       Impact factor: 2.200

2.  Gastrointestinal myoelectric and clinical patterns of recovery after laparotomy.

Authors:  J H Waldhausen; M E Shaffrey; B S Skenderis; R S Jones; B D Schirmer
Journal:  Ann Surg       Date:  1990-06       Impact factor: 12.969

Review 3.  Normal and abnormal electrical propagation in the small intestine.

Authors:  W J E P Lammers
Journal:  Acta Physiol (Oxf)       Date:  2014-09-18       Impact factor: 6.311

4.  Rapid high-amplitude circumferential slow wave propagation during normal gastric pacemaking and dysrhythmias.

Authors:  G O'Grady; P Du; N Paskaranandavadivel; T R Angeli; W J E P Lammers; S J Asirvatham; J A Windsor; G Farrugia; A J Pullan; L K Cheng
Journal:  Neurogastroenterol Motil       Date:  2012-07       Impact factor: 3.598

Review 5.  Colonic myoelectric activity in the irritable bowel syndrome.

Authors:  W J Snape; G M Carlson; S Cohen
Journal:  Gastroenterology       Date:  1976-03       Impact factor: 22.682

6.  Loss of Interstitial Cells of Cajal and Patterns of Gastric Dysrhythmia in Patients With Chronic Unexplained Nausea and Vomiting.

Authors:  Timothy R Angeli; Leo K Cheng; Peng Du; Tim Hsu-Han Wang; Cheryl E Bernard; Maria-Giuliana Vannucchi; Maria Simonetta Faussone-Pellegrini; Christopher Lahr; Ryash Vather; John A Windsor; Gianrico Farrugia; Thomas L Abell; Gregory O'Grady
Journal:  Gastroenterology       Date:  2015-04-08       Impact factor: 22.682

7.  Ano1 is a selective marker of interstitial cells of Cajal in the human and mouse gastrointestinal tract.

Authors:  Pedro J Gomez-Pinilla; Simon J Gibbons; Michael R Bardsley; Andrea Lorincz; Maria J Pozo; Pankaj J Pasricha; Matt Van de Rijn; Robert B West; Michael G Sarr; Michael L Kendrick; Robert R Cima; Eric J Dozois; David W Larson; Tamas Ordog; Gianrico Farrugia
Journal:  Am J Physiol Gastrointest Liver Physiol       Date:  2009-04-16       Impact factor: 4.052

8.  Ascending excitatory neural pathways modulate slow phasic myogenic contractions in the isolated human colon.

Authors:  S E Carbone; P G Dinning; M Costa; N J Spencer; S J H Brookes; D A Wattchow
Journal:  Neurogastroenterol Motil       Date:  2013-05-01       Impact factor: 3.598

9.  Biophysically based modeling of the interstitial cells of cajal: current status and future perspectives.

Authors:  Rachel Lees-Green; Peng Du; Gregory O'Grady; Arthur Beyder; Gianrico Farrugia; Andrew J Pullan
Journal:  Front Physiol       Date:  2011-07-04       Impact factor: 4.566

10.  The origin of segmentation motor activity in the intestine.

Authors:  Jan D Huizinga; Ji-Hong Chen; Yong Fang Zhu; Andrew Pawelka; Ryan J McGinn; Berj L Bardakjian; Sean P Parsons; Wolfgang A Kunze; Richard You Wu; Premysl Bercik; Amir Khoshdel; Sifeng Chen; Sheng Yin; Qian Zhang; Yuanjie Yu; Qingmin Gao; Kongling Li; Xinghai Hu; Natalia Zarate; Phillip Collins; Marc Pistilli; Junling Ma; Ruixue Zhang; David Chen
Journal:  Nat Commun       Date:  2014       Impact factor: 14.919

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  8 in total

1.  Original Research: Combined model of bladder detrusor smooth muscle and interstitial cells.

Authors:  Josef Rosenberg; Miroslav Byrtus; Milan Stengl
Journal:  Exp Biol Med (Maywood)       Date:  2016-06-20

2.  Electrical stimulation of gut motility guided by an in silico model.

Authors:  Bradley B Barth; Craig S Henriquez; Warren M Grill; Xiling Shen
Journal:  J Neural Eng       Date:  2017-12       Impact factor: 5.379

3.  A quantitative systems pharmacology model of colonic motility with applications in drug development.

Authors:  Raibatak Das; Lucia Wille; Liming Zhang; Chunlin Chen; Wendy Winchester; Jangir Selimkhanov; Jill Wykosky; Joshua F Apgar; John M Burke; Mark Rogge; Fei Hua; Majid Vakilynejad
Journal:  J Pharmacokinet Pharmacodyn       Date:  2019-08-20       Impact factor: 2.745

4.  Relationships between serum electrolyte concentrations and ileus: A joint clinical and mathematical modeling study.

Authors:  James A Penfold; Cameron I Wells; Peng Du; Anna Qian; Ryash Vather; Ian P Bissett; Gregory O'Grady
Journal:  Physiol Rep       Date:  2021-02

Review 5.  Gut bioengineering strategies for regenerative medicine.

Authors:  John D O'Neill; Meghan R Pinezich; Brandon A Guenthart; Gordana Vunjak-Novakovic
Journal:  Am J Physiol Gastrointest Liver Physiol       Date:  2020-11-11       Impact factor: 4.052

Review 6.  Progress in Mathematical Modeling of Gastrointestinal Slow Wave Abnormalities.

Authors:  Peng Du; Stefan Calder; Timothy R Angeli; Shameer Sathar; Niranchan Paskaranandavadivel; Gregory O'Grady; Leo K Cheng
Journal:  Front Physiol       Date:  2018-01-15       Impact factor: 4.566

7.  Polygonally Meshed Dipole Model Simulation of the Electrical Field Produced by the Stomach and Intestines.

Authors:  Masaki Kawano; Takahiro Emoto
Journal:  Comput Math Methods Med       Date:  2020-10-21       Impact factor: 2.238

Review 8.  Novel Bionics Assessment of Anorectal Mechanosensory Physiology.

Authors:  Hans Gregersen
Journal:  Bioengineering (Basel)       Date:  2020-11-14
  8 in total

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