Literature DB >> 23795124

N-[(2,6-Di-ethyl-phen-yl)carbamo-thio-yl]-2,2-di-phenyl-acetamide.

Mohd Sukeri Mohd Yusof1, Nur Rafikah Razali, Suhana Arshad, Azhar Abdul Rahman, Ibrahim Abdul Razak.   

Abstract

In the title compound, C25H26N2OS, the diethyl-substituted benzene ring forms dihedral angles of 67.38 (9) and 55.32 (9)° with the terminal benzene rings. The mol-ecule adopts a trans-cis conformation with respect to the orientations of the di-phenyl-methane and 1,3-di-ethyl-benzene groups with respect to the S atom across the C-N bonds. This conformation is stabilized by an intra-molecular N-H⋯O hydrogen bond, which generates an S(6) ring. In the crystal, pairs of N-H⋯S hydrogen bonds link the mol-ecules into inversion dimers, forming R 2 (2)(6) loops. The dimer linkage is reinforced by a pair of C-H⋯S hydrogen bonds, which generate R 2 (2)(8) loops. Weak C-H⋯π and π-π [centroid-centroid seperation = 3.8821 (10) Å] inter-actions also occur in the crystal structure.

Entities:  

Year:  2013        PMID: 23795124      PMCID: PMC3685105          DOI: 10.1107/S1600536813013354

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures and backgroud to thio­urea derivatives, see: Yusof et al. (2012a ▶,b ▶). For hydrogen-bond motifs, see: Bernstein et al. (1995 ▶). For the stability of the temperature controller used for the data collection, see: Cosier & Glazer (1986 ▶).

Experimental

Crystal data

C25H26N2OS M = 402.54 Triclinic, a = 8.0091 (1) Å b = 11.7289 (2) Å c = 11.8923 (2) Å α = 79.008 (1)° β = 80.628 (1)° γ = 83.936 (1)° V = 1078.79 (3) Å3 Z = 2 Mo Kα radiation μ = 0.17 mm−1 T = 100 K 0.41 × 0.17 × 0.08 mm

Data collection

Bruker SMART APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.934, T max = 0.987 20294 measured reflections 3767 independent reflections 3123 reflections with I > 2σ(I) R int = 0.037

Refinement

R[F 2 > 2σ(F 2)] = 0.038 wR(F 2) = 0.087 S = 1.06 3767 reflections 272 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.27 e Å−3 Δρmin = −0.25 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Click here for additional data file. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536813013354/hb7080sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813013354/hb7080Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536813013354/hb7080Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C25H26N2OSZ = 2
Mr = 402.54F(000) = 428
Triclinic, P1Dx = 1.239 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 8.0091 (1) ÅCell parameters from 7540 reflections
b = 11.7289 (2) Åθ = 2.7–31.3°
c = 11.8923 (2) ŵ = 0.17 mm1
α = 79.008 (1)°T = 100 K
β = 80.628 (1)°Plate, colourless
γ = 83.936 (1)°0.41 × 0.17 × 0.08 mm
V = 1078.79 (3) Å3
Bruker SMART APEXII CCD diffractometer3767 independent reflections
Radiation source: fine-focus sealed tube3123 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.037
φ and ω scansθmax = 25.0°, θmin = 1.8°
Absorption correction: multi-scan (SADABS; Bruker, 2009)h = −9→9
Tmin = 0.934, Tmax = 0.987k = −13→13
20294 measured reflectionsl = −13→14
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.038Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.087H atoms treated by a mixture of independent and constrained refinement
S = 1.06w = 1/[σ2(Fo2) + (0.0256P)2 + 0.7158P] where P = (Fo2 + 2Fc2)/3
3767 reflections(Δ/σ)max = 0.001
272 parametersΔρmax = 0.27 e Å3
0 restraintsΔρmin = −0.25 e Å3
Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.14725 (6)0.37823 (4)0.90032 (4)0.02277 (14)
O10.23366 (16)0.74355 (10)0.69663 (10)0.0209 (3)
N10.1116 (2)0.60788 (12)0.84279 (13)0.0175 (3)
H1N10.041 (3)0.6010 (17)0.9051 (18)0.027 (6)*
N20.32515 (19)0.51541 (13)0.72816 (13)0.0176 (3)
H1N20.334 (3)0.5850 (19)0.6903 (18)0.030 (6)*
C10.1681 (2)0.88822 (15)0.95814 (15)0.0192 (4)
H1A0.14940.81821.01220.023*
C20.2650 (2)0.96979 (16)0.98238 (16)0.0214 (4)
H2A0.31240.95551.05250.026*
C30.2921 (2)1.07207 (16)0.90366 (16)0.0226 (4)
H3A0.35991.12750.91900.027*
C40.2204 (2)1.09329 (15)0.80297 (16)0.0217 (4)
H4A0.23771.16400.74980.026*
C50.1228 (2)1.01165 (15)0.77866 (16)0.0191 (4)
H5A0.07331.02720.70940.023*
C60.0981 (2)0.90785 (14)0.85548 (15)0.0151 (4)
C70.0022 (2)0.81080 (14)0.83243 (14)0.0154 (4)
H7A−0.05380.77150.90940.018*
C8−0.1370 (2)0.84747 (14)0.75624 (15)0.0165 (4)
C9−0.3053 (2)0.84527 (15)0.80968 (16)0.0194 (4)
H9A−0.32930.82230.89130.023*
C10−0.4384 (2)0.87616 (15)0.74551 (16)0.0218 (4)
H10A−0.55250.87450.78320.026*
C11−0.4046 (3)0.90924 (16)0.62722 (17)0.0239 (4)
H11A−0.49540.93040.58310.029*
C12−0.2384 (3)0.91175 (17)0.57251 (16)0.0261 (5)
H12A−0.21550.93490.49080.031*
C13−0.1047 (2)0.88063 (16)0.63647 (16)0.0219 (4)
H13A0.00910.88200.59820.026*
C140.1283 (2)0.71976 (15)0.78288 (15)0.0159 (4)
C150.2009 (2)0.50521 (15)0.81792 (15)0.0170 (4)
C160.4354 (2)0.41906 (14)0.69377 (15)0.0164 (4)
C170.4107 (2)0.37685 (15)0.59603 (15)0.0196 (4)
C180.5229 (3)0.28617 (16)0.56247 (17)0.0271 (5)
H18A0.50950.25620.49590.032*
C190.6536 (3)0.23894 (17)0.62419 (19)0.0310 (5)
H19A0.72800.17640.60060.037*
C200.6758 (2)0.28280 (16)0.72028 (18)0.0258 (5)
H20A0.76590.25000.76220.031*
C210.5685 (2)0.37423 (15)0.75657 (15)0.0195 (4)
C220.6019 (3)0.42551 (17)0.85727 (16)0.0260 (5)
H22A0.67230.36770.90530.031*
H22B0.49260.44170.90600.031*
C230.6922 (3)0.53785 (18)0.81866 (18)0.0333 (5)
H23A0.71390.56620.88690.050*
H23B0.62040.59690.77450.050*
H23C0.80010.52260.76980.050*
C240.2659 (3)0.42388 (17)0.52918 (17)0.0278 (5)
H24A0.30070.41570.44710.033*
H24B0.24140.50790.53180.033*
C250.1047 (3)0.36140 (18)0.57675 (19)0.0326 (5)
H25A0.01560.39410.52960.049*
H25B0.06700.37190.65700.049*
H25C0.12800.27810.57410.049*
U11U22U33U12U13U23
S10.0282 (3)0.0146 (2)0.0217 (3)−0.0026 (2)0.0066 (2)−0.00198 (18)
O10.0191 (7)0.0186 (6)0.0223 (7)−0.0033 (5)0.0043 (6)−0.0022 (5)
N10.0161 (8)0.0163 (8)0.0178 (8)−0.0019 (6)0.0040 (7)−0.0024 (6)
N20.0186 (9)0.0137 (8)0.0181 (8)−0.0010 (6)0.0015 (7)−0.0009 (6)
C10.0192 (10)0.0180 (9)0.0191 (10)0.0007 (8)−0.0016 (8)−0.0023 (7)
C20.0208 (11)0.0249 (10)0.0210 (10)−0.0003 (8)−0.0064 (8)−0.0079 (8)
C30.0195 (11)0.0236 (10)0.0270 (11)−0.0042 (8)−0.0011 (8)−0.0106 (8)
C40.0233 (11)0.0166 (9)0.0241 (10)−0.0039 (8)0.0012 (8)−0.0032 (8)
C50.0187 (10)0.0194 (9)0.0188 (9)−0.0005 (8)−0.0013 (8)−0.0039 (7)
C60.0110 (9)0.0165 (9)0.0178 (9)0.0006 (7)0.0004 (7)−0.0057 (7)
C70.0133 (9)0.0166 (9)0.0152 (9)−0.0021 (7)0.0001 (7)−0.0012 (7)
C80.0162 (10)0.0125 (8)0.0218 (10)−0.0026 (7)−0.0015 (8)−0.0058 (7)
C90.0203 (10)0.0183 (9)0.0198 (10)−0.0032 (8)0.0009 (8)−0.0059 (7)
C100.0140 (10)0.0232 (10)0.0297 (11)−0.0012 (8)−0.0026 (8)−0.0092 (8)
C110.0220 (11)0.0230 (10)0.0304 (11)−0.0007 (8)−0.0115 (9)−0.0083 (8)
C120.0307 (12)0.0293 (11)0.0188 (10)−0.0037 (9)−0.0059 (9)−0.0026 (8)
C130.0186 (11)0.0255 (10)0.0214 (10)−0.0052 (8)−0.0003 (8)−0.0038 (8)
C140.0143 (10)0.0173 (9)0.0180 (9)−0.0050 (7)−0.0052 (8)−0.0035 (7)
C150.0155 (10)0.0180 (9)0.0182 (9)−0.0018 (7)−0.0031 (8)−0.0043 (7)
C160.0144 (10)0.0157 (9)0.0180 (9)−0.0033 (7)0.0016 (7)−0.0026 (7)
C170.0173 (10)0.0222 (10)0.0191 (10)−0.0107 (8)0.0030 (8)−0.0027 (8)
C180.0269 (12)0.0276 (11)0.0285 (11)−0.0135 (9)0.0090 (9)−0.0142 (9)
C190.0224 (12)0.0218 (10)0.0470 (13)−0.0013 (9)0.0087 (10)−0.0136 (9)
C200.0164 (10)0.0225 (10)0.0372 (12)−0.0012 (8)−0.0027 (9)−0.0030 (9)
C210.0185 (10)0.0176 (9)0.0218 (10)−0.0050 (8)−0.0010 (8)−0.0018 (8)
C220.0252 (11)0.0288 (11)0.0241 (10)0.0000 (9)−0.0078 (9)−0.0027 (8)
C230.0348 (13)0.0402 (12)0.0304 (12)−0.0117 (10)−0.0077 (10)−0.0125 (10)
C240.0294 (12)0.0324 (11)0.0229 (10)−0.0111 (9)−0.0050 (9)−0.0022 (9)
C250.0254 (12)0.0320 (11)0.0409 (13)−0.0077 (9)−0.0107 (10)0.0003 (10)
S1—C151.6748 (17)C11—C121.384 (3)
O1—C141.225 (2)C11—H11A0.9500
N1—C141.377 (2)C12—C131.391 (3)
N1—C151.391 (2)C12—H12A0.9500
N1—H1N10.85 (2)C13—H13A0.9500
N2—C151.332 (2)C16—C171.396 (3)
N2—C161.439 (2)C16—C211.401 (3)
N2—H1N20.86 (2)C17—C181.393 (3)
C1—C21.391 (3)C17—C241.510 (3)
C1—C61.395 (2)C18—C191.383 (3)
C1—H1A0.9500C18—H18A0.9500
C2—C31.387 (3)C19—C201.383 (3)
C2—H2A0.9500C19—H19A0.9500
C3—C41.380 (3)C20—C211.391 (3)
C3—H3A0.9500C20—H20A0.9500
C4—C51.396 (3)C21—C221.510 (3)
C4—H4A0.9500C22—C231.527 (3)
C5—C61.387 (2)C22—H22A0.9900
C5—H5A0.9500C22—H22B0.9900
C6—C71.527 (2)C23—H23A0.9800
C7—C141.525 (2)C23—H23B0.9800
C7—C81.525 (2)C23—H23C0.9800
C7—H7A1.0000C24—C251.526 (3)
C8—C131.392 (2)C24—H24A0.9900
C8—C91.394 (2)C24—H24B0.9900
C9—C101.389 (3)C25—H25A0.9800
C9—H9A0.9500C25—H25B0.9800
C10—C111.376 (3)C25—H25C0.9800
C10—H10A0.9500
C14—N1—C15128.46 (15)O1—C14—N1122.87 (16)
C14—N1—H1N1115.8 (14)O1—C14—C7123.13 (15)
C15—N1—H1N1115.7 (14)N1—C14—C7113.98 (14)
C15—N2—C16124.03 (15)N2—C15—N1116.69 (15)
C15—N2—H1N2114.5 (14)N2—C15—S1124.24 (14)
C16—N2—H1N2121.5 (14)N1—C15—S1119.07 (13)
C2—C1—C6120.85 (16)C17—C16—C21122.22 (17)
C2—C1—H1A119.6C17—C16—N2118.95 (16)
C6—C1—H1A119.6C21—C16—N2118.77 (16)
C3—C2—C1119.62 (17)C18—C17—C16117.69 (18)
C3—C2—H2A120.2C18—C17—C24119.97 (17)
C1—C2—H2A120.2C16—C17—C24122.32 (17)
C4—C3—C2119.93 (17)C19—C18—C17121.23 (18)
C4—C3—H3A120.0C19—C18—H18A119.4
C2—C3—H3A120.0C17—C18—H18A119.4
C3—C4—C5120.51 (17)C20—C19—C18119.91 (18)
C3—C4—H4A119.7C20—C19—H19A120.0
C5—C4—H4A119.7C18—C19—H19A120.0
C6—C5—C4120.08 (17)C19—C20—C21121.10 (19)
C6—C5—H5A120.0C19—C20—H20A119.4
C4—C5—H5A120.0C21—C20—H20A119.4
C5—C6—C1118.98 (16)C20—C21—C16117.83 (17)
C5—C6—C7123.53 (16)C20—C21—C22120.08 (18)
C1—C6—C7117.46 (15)C16—C21—C22122.03 (16)
C14—C7—C8109.72 (14)C21—C22—C23112.66 (16)
C14—C7—C6109.54 (14)C21—C22—H22A109.1
C8—C7—C6116.82 (14)C23—C22—H22A109.1
C14—C7—H7A106.7C21—C22—H22B109.1
C8—C7—H7A106.7C23—C22—H22B109.1
C6—C7—H7A106.7H22A—C22—H22B107.8
C13—C8—C9118.51 (17)C22—C23—H23A109.5
C13—C8—C7123.51 (16)C22—C23—H23B109.5
C9—C8—C7117.97 (15)H23A—C23—H23B109.5
C10—C9—C8121.07 (17)C22—C23—H23C109.5
C10—C9—H9A119.5H23A—C23—H23C109.5
C8—C9—H9A119.5H23B—C23—H23C109.5
C11—C10—C9119.79 (17)C17—C24—C25112.69 (16)
C11—C10—H10A120.1C17—C24—H24A109.1
C9—C10—H10A120.1C25—C24—H24A109.1
C10—C11—C12120.03 (18)C17—C24—H24B109.1
C10—C11—H11A120.0C25—C24—H24B109.1
C12—C11—H11A120.0H24A—C24—H24B107.8
C11—C12—C13120.37 (18)C24—C25—H25A109.5
C11—C12—H12A119.8C24—C25—H25B109.5
C13—C12—H12A119.8H25A—C25—H25B109.5
C12—C13—C8120.23 (17)C24—C25—H25C109.5
C12—C13—H13A119.9H25A—C25—H25C109.5
C8—C13—H13A119.9H25B—C25—H25C109.5
C6—C1—C2—C30.1 (3)C6—C7—C14—O1−54.8 (2)
C1—C2—C3—C41.2 (3)C8—C7—C14—N1−104.38 (17)
C2—C3—C4—C5−1.0 (3)C6—C7—C14—N1126.15 (16)
C3—C4—C5—C6−0.4 (3)C16—N2—C15—N1176.91 (16)
C4—C5—C6—C11.7 (3)C16—N2—C15—S1−3.3 (3)
C4—C5—C6—C7−176.24 (16)C14—N1—C15—N23.8 (3)
C2—C1—C6—C5−1.6 (3)C14—N1—C15—S1−176.01 (15)
C2—C1—C6—C7176.50 (16)C15—N2—C16—C17104.9 (2)
C5—C6—C7—C1496.32 (19)C15—N2—C16—C21−77.9 (2)
C1—C6—C7—C14−81.68 (18)C21—C16—C17—C180.7 (3)
C5—C6—C7—C8−29.2 (2)N2—C16—C17—C18177.83 (15)
C1—C6—C7—C8152.83 (16)C21—C16—C17—C24179.14 (16)
C14—C7—C8—C13−49.6 (2)N2—C16—C17—C24−3.8 (2)
C6—C7—C8—C1375.8 (2)C16—C17—C18—C190.4 (3)
C14—C7—C8—C9129.11 (16)C24—C17—C18—C19−177.99 (17)
C6—C7—C8—C9−105.49 (18)C17—C18—C19—C20−0.8 (3)
C13—C8—C9—C10−0.5 (3)C18—C19—C20—C210.0 (3)
C7—C8—C9—C10−179.22 (15)C19—C20—C21—C161.1 (3)
C8—C9—C10—C110.2 (3)C19—C20—C21—C22−176.21 (17)
C9—C10—C11—C120.0 (3)C17—C16—C21—C20−1.5 (3)
C10—C11—C12—C130.2 (3)N2—C16—C21—C20−178.60 (15)
C11—C12—C13—C8−0.5 (3)C17—C16—C21—C22175.75 (16)
C9—C8—C13—C120.6 (3)N2—C16—C21—C22−1.3 (2)
C7—C8—C13—C12179.27 (16)C20—C21—C22—C2399.3 (2)
C15—N1—C14—O1−2.0 (3)C16—C21—C22—C23−77.9 (2)
C15—N1—C14—C7177.14 (16)C18—C17—C24—C2590.5 (2)
C8—C7—C14—O174.7 (2)C16—C17—C24—C25−87.9 (2)
D—H···AD—HH···AD···AD—H···A
N2—H1N2···O10.86 (2)1.96 (2)2.6702 (19)140 (2)
N1—H1N1···S1i0.85 (2)2.59 (2)3.4225 (16)167.4 (18)
C7—H7A···S1i1.002.643.6172 (17)165
C10—H10A···Cg1ii0.952.563.3859 (19)146
Table 1

Hydrogen-bond geometry (Å, °)

Cg1 is the centroid of the C1–C6 benzene ring.

D—H⋯A D—HH⋯A DA D—H⋯A
N2—H1N2⋯O10.86 (2)1.96 (2)2.6702 (19)140 (2)
N1—H1N1⋯S1i 0.85 (2)2.59 (2)3.4225 (16)167.4 (18)
C7—H7A⋯S1i 1.002.643.6172 (17)165
C10—H10ACg1ii 0.952.563.3859 (19)146

Symmetry codes: (i) ; (ii) .

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