Literature DB >> 23795063

5-Cyclo-hexyl-2-(2-fluoro-phen-yl)-3-methyl-sulfinyl-1-benzo-furan.

Hong Dae Choi1, Pil Ja Seo, Uk Lee.   

Abstract

In the title compound, C21H21FO2S, the cyclo-hexyl ring adopts a chair conformation. The 2-fluoro-benzene ring makes a dihedral angle of 38.68 (6)° with the mean plane [r.m.s. deviation = 0.018 (2) Å] of the benzo-furan fragment. In the crystal, mol-ecules are linked by pairs of C-H⋯O hydrogen bonds into dimers, which are further packed into stacks along the c axis by C-H⋯O hydrogen bonds. In addition, the stacked mol-ecules exhibit S⋯O contacts [3.1733 (13) Å] involving the sulfinyl groups. The F atom is disordered over two positions, with site-occupancy factors of 0.961 (3) and 0.039 (3).

Entities:  

Year:  2013        PMID: 23795063      PMCID: PMC3685044          DOI: 10.1107/S1600536813012701

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background information and the crystal structures of related compounds, see: Choi et al. (2011 ▶, 2012 ▶). For details of sulfin­yl–sulfinyl inter­actions, see: Choi et al. (2008 ▶). For a review of carbon­yl–carbonyl inter­actions, see: Allen et al. (1998 ▶).

Experimental

Crystal data

C21H21FO2S M = 356.44 Monoclinic, a = 33.0231 (12) Å b = 5.6347 (2) Å c = 19.2200 (6) Å β = 95.855 (2)° V = 3557.7 (2) Å3 Z = 8 Mo Kα radiation μ = 0.20 mm−1 T = 173 K 0.31 × 0.15 × 0.09 mm

Data collection

Bruker SMART APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.545, T max = 0.746 29435 measured reflections 4455 independent reflections 3455 reflections with I > 2σ(I) R int = 0.066

Refinement

R[F 2 > 2σ(F 2)] = 0.045 wR(F 2) = 0.122 S = 1.07 4455 reflections 237 parameters 14 restraints H-atom parameters constrained Δρmax = 0.36 e Å−3 Δρmin = −0.33 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▶) and DIAMOND (Brandenburg, 1998 ▶); software used to prepare material for publication: SHELXL97. Click here for additional data file. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536813012701/tk5225sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813012701/tk5225Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536813012701/tk5225Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C21H21FO2SF(000) = 1504
Mr = 356.44Dx = 1.331 Mg m3
Monoclinic, C2/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -C 2ycCell parameters from 7608 reflections
a = 33.0231 (12) Åθ = 2.4–27.9°
b = 5.6347 (2) ŵ = 0.20 mm1
c = 19.2200 (6) ÅT = 173 K
β = 95.855 (2)°Block, colourless
V = 3557.7 (2) Å30.31 × 0.15 × 0.09 mm
Z = 8
Bruker SMART APEXII CCD diffractometer4455 independent reflections
Radiation source: rotating anode3455 reflections with I > 2σ(I)
Graphite multilayer monochromatorRint = 0.066
Detector resolution: 10.0 pixels mm-1θmax = 28.4°, θmin = 2.1°
φ and ω scansh = −44→42
Absorption correction: multi-scan (SADABS; Bruker, 2009)k = −5→7
Tmin = 0.545, Tmax = 0.746l = −25→25
29435 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.045Hydrogen site location: difference Fourier map
wR(F2) = 0.122H-atom parameters constrained
S = 1.07w = 1/[σ2(Fo2) + (0.0503P)2 + 2.7846P] where P = (Fo2 + 2Fc2)/3
4455 reflections(Δ/σ)max = 0.001
237 parametersΔρmax = 0.36 e Å3
14 restraintsΔρmin = −0.33 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
S10.206366 (12)0.27237 (7)0.42614 (2)0.02355 (12)
O10.11688 (4)0.5340 (3)0.29615 (6)0.0347 (3)
O20.21653 (4)0.4453 (2)0.48408 (6)0.0320 (3)
C10.16017 (5)0.3784 (3)0.38215 (8)0.0233 (3)
C20.12801 (5)0.4947 (3)0.41447 (9)0.0251 (4)
C30.11880 (5)0.5338 (3)0.48284 (9)0.0271 (4)
H30.13560.46870.52120.033*
C40.08520 (6)0.6673 (4)0.49437 (9)0.0340 (4)
C50.06078 (7)0.7595 (4)0.43703 (11)0.0494 (6)
H50.03770.85190.44540.059*
C60.06884 (7)0.7218 (4)0.36850 (11)0.0497 (6)
H60.05190.78490.33000.060*
C70.10277 (5)0.5879 (4)0.35935 (9)0.0330 (4)
C80.15236 (5)0.4084 (3)0.31233 (8)0.0252 (4)
C90.07601 (6)0.7166 (4)0.56872 (10)0.0358 (4)
H90.09310.60470.59960.043*
C100.03215 (7)0.6704 (5)0.58103 (12)0.0508 (6)
H10A0.02510.50410.56850.061*
H10B0.01410.77550.55040.061*
C110.02494 (8)0.7145 (5)0.65731 (13)0.0620 (8)
H11A−0.00420.69060.66310.074*
H11B0.04090.59900.68770.074*
C120.03733 (7)0.9641 (5)0.67931 (12)0.0505 (6)
H12A0.01941.07920.65220.061*
H12B0.03380.98580.72950.061*
C130.08082 (7)1.0129 (5)0.66758 (11)0.0504 (6)
H13A0.09900.91090.69900.061*
H13B0.08741.18040.67940.061*
C140.08855 (7)0.9658 (4)0.59173 (11)0.0465 (5)
H14A0.07311.08220.56090.056*
H14B0.11790.98810.58680.056*
C150.17462 (5)0.3439 (3)0.25303 (8)0.0263 (4)
C16A0.19517 (6)0.1306 (3)0.25044 (9)0.0301 (4)0.961 (3)
F1A0.19125 (4)−0.0328 (2)0.30066 (6)0.0405 (4)0.961 (3)
C16B0.19517 (6)0.1306 (3)0.25044 (9)0.0301 (4)0.04
H16B0.19300.01810.28670.036*0.039 (3)
C170.21859 (6)0.0748 (4)0.19744 (10)0.0370 (5)
H170.2329−0.07140.19790.044*
C180.22086 (6)0.2346 (4)0.14361 (10)0.0383 (5)
H180.23710.19920.10680.046*
C190.19974 (6)0.4449 (4)0.14305 (9)0.0374 (5)
H190.20100.55300.10540.045*
C20A0.17669 (6)0.4997 (4)0.19703 (9)0.0317 (4)0.961 (3)
H20A0.16210.64520.19600.038*0.961 (3)
C20B0.17669 (6)0.4997 (4)0.19703 (9)0.0317 (4)0.04
F1B0.1515 (6)0.680 (3)0.1832 (13)0.031 (7)0.039 (3)
C210.18645 (6)0.0135 (3)0.46404 (10)0.0360 (4)
H21A0.2084−0.06960.49230.054*
H21B0.1746−0.09180.42680.054*
H21C0.16540.05990.49380.054*
U11U22U33U12U13U23
S10.0256 (2)0.0259 (2)0.0196 (2)0.00267 (16)0.00441 (15)0.00009 (16)
O10.0323 (7)0.0526 (8)0.0196 (6)0.0133 (6)0.0049 (5)0.0022 (6)
O20.0346 (7)0.0348 (7)0.0257 (6)0.0027 (5)−0.0020 (5)−0.0065 (5)
C10.0271 (8)0.0246 (8)0.0186 (8)0.0012 (7)0.0045 (6)−0.0007 (6)
C20.0257 (8)0.0292 (9)0.0209 (8)0.0016 (7)0.0054 (6)0.0005 (7)
C30.0263 (8)0.0339 (9)0.0215 (8)0.0018 (7)0.0046 (7)0.0008 (7)
C40.0352 (10)0.0427 (11)0.0254 (9)0.0066 (8)0.0096 (8)−0.0003 (8)
C50.0427 (12)0.0707 (16)0.0366 (11)0.0285 (11)0.0126 (9)0.0036 (11)
C60.0448 (12)0.0762 (16)0.0283 (10)0.0309 (11)0.0047 (9)0.0060 (10)
C70.0325 (10)0.0469 (11)0.0203 (9)0.0098 (8)0.0063 (7)0.0005 (8)
C80.0259 (8)0.0285 (9)0.0214 (8)0.0027 (7)0.0033 (6)−0.0007 (7)
C90.0378 (10)0.0461 (11)0.0253 (9)0.0097 (9)0.0110 (8)−0.0015 (8)
C100.0497 (13)0.0640 (15)0.0423 (12)−0.0144 (11)0.0225 (10)−0.0213 (11)
C110.0598 (15)0.0855 (19)0.0462 (13)−0.0247 (14)0.0324 (12)−0.0241 (13)
C120.0426 (12)0.0723 (16)0.0386 (12)0.0047 (11)0.0134 (10)−0.0210 (11)
C130.0461 (12)0.0668 (16)0.0399 (12)−0.0060 (11)0.0113 (10)−0.0195 (11)
C140.0444 (12)0.0585 (14)0.0390 (12)−0.0084 (10)0.0163 (9)−0.0109 (10)
C150.0283 (9)0.0329 (9)0.0180 (8)−0.0016 (7)0.0037 (6)−0.0032 (7)
C16A0.0364 (10)0.0315 (10)0.0227 (9)−0.0017 (8)0.0044 (7)−0.0041 (7)
F1A0.0590 (8)0.0315 (6)0.0326 (7)0.0058 (5)0.0117 (5)0.0008 (5)
C16B0.0364 (10)0.0315 (10)0.0227 (9)−0.0017 (8)0.0044 (7)−0.0041 (7)
C170.0361 (10)0.0422 (11)0.0336 (10)0.0015 (8)0.0071 (8)−0.0124 (9)
C180.0362 (10)0.0545 (13)0.0255 (9)−0.0047 (9)0.0096 (8)−0.0142 (9)
C190.0396 (11)0.0545 (13)0.0187 (9)−0.0068 (9)0.0059 (8)0.0012 (8)
C20A0.0335 (10)0.0391 (11)0.0223 (9)0.0002 (8)0.0025 (7)0.0007 (8)
C20B0.0335 (10)0.0391 (11)0.0223 (9)0.0002 (8)0.0025 (7)0.0007 (8)
F1B0.030 (10)0.036 (11)0.028 (10)−0.002 (8)0.006 (7)0.000 (8)
C210.0427 (11)0.0311 (10)0.0350 (10)0.0002 (8)0.0070 (9)0.0103 (8)
S1—O21.4921 (13)C11—C121.513 (3)
S1—C11.7708 (17)C11—H11A0.9900
S1—C211.7856 (19)C11—H11B0.9900
S1—O2i3.1733 (13)C12—C131.502 (3)
O1—C81.377 (2)C12—H12A0.9900
O1—C71.379 (2)C12—H12B0.9900
C1—C81.351 (2)C13—C141.529 (3)
C1—C21.442 (2)C13—H13A0.9900
C2—C71.383 (2)C13—H13B0.9900
C2—C31.396 (2)C14—H14A0.9900
C3—C41.377 (2)C14—H14B0.9900
C3—H30.9500C15—C16A1.384 (3)
C4—C51.398 (3)C15—C20A1.396 (2)
C4—C91.516 (2)C16A—F1A1.3495 (19)
C5—C61.387 (3)C16A—C171.377 (2)
C5—H50.9500C17—C181.380 (3)
C6—C71.377 (3)C17—H170.9500
C6—H60.9500C18—C191.374 (3)
C8—C151.464 (2)C18—H180.9500
C9—C101.514 (3)C19—C20A1.383 (3)
C9—C141.517 (3)C19—H190.9500
C9—H91.0000C20A—H20A0.9500
C10—C111.529 (3)C21—H21A0.9800
C10—H10A0.9900C21—H21B0.9800
C10—H10B0.9900C21—H21C0.9800
O2—S1—C1104.66 (7)C12—C11—H11B109.5
O2—S1—C21107.05 (9)C10—C11—H11B109.5
C1—S1—C2197.77 (9)H11A—C11—H11B108.1
O2—S1—O2i74.92 (6)C13—C12—C11111.33 (19)
C1—S1—O2i173.96 (6)C13—C12—H12A109.4
C21—S1—O2i76.76 (7)C11—C12—H12A109.4
C8—O1—C7105.70 (13)C13—C12—H12B109.4
C8—C1—C2107.27 (15)C11—C12—H12B109.4
C8—C1—S1125.75 (13)H12A—C12—H12B108.0
C2—C1—S1125.75 (12)C12—C13—C14111.50 (18)
C7—C2—C3119.27 (15)C12—C13—H13A109.3
C7—C2—C1104.79 (14)C14—C13—H13A109.3
C3—C2—C1135.90 (16)C12—C13—H13B109.3
C4—C3—C2119.62 (16)C14—C13—H13B109.3
C4—C3—H3120.2H13A—C13—H13B108.0
C2—C3—H3120.2C9—C14—C13111.81 (19)
C3—C4—C5119.06 (17)C9—C14—H14A109.3
C3—C4—C9119.58 (17)C13—C14—H14A109.3
C5—C4—C9121.34 (17)C9—C14—H14B109.3
C6—C5—C4122.73 (18)C13—C14—H14B109.3
C6—C5—H5118.6H14A—C14—H14B107.9
C4—C5—H5118.6C16A—C15—C20A117.12 (15)
C7—C6—C5116.29 (19)C16A—C15—C8122.04 (16)
C7—C6—H6121.9C20A—C15—C8120.82 (16)
C5—C6—H6121.9F1A—C16A—C17118.39 (17)
C6—C7—O1125.86 (17)F1A—C16A—C15118.93 (15)
C6—C7—C2123.02 (17)C17—C16A—C15122.65 (17)
O1—C7—C2111.09 (15)C16A—C17—C18118.91 (19)
C1—C8—O1111.12 (14)C16A—C17—H17120.5
C1—C8—C15133.03 (16)C18—C17—H17120.5
O1—C8—C15115.78 (14)C19—C18—C17120.16 (17)
C10—C9—C4113.72 (17)C19—C18—H18119.9
C10—C9—C14110.52 (17)C17—C18—H18119.9
C4—C9—C14111.67 (17)C18—C19—C20A120.30 (18)
C10—C9—H9106.8C18—C19—H19119.8
C4—C9—H9106.8C20A—C19—H19119.8
C14—C9—H9106.8C19—C20A—C15120.78 (18)
C9—C10—C11111.53 (18)C19—C20A—H20A119.6
C9—C10—H10A109.3C15—C20A—H20A119.6
C11—C10—H10A109.3S1—C21—H21A109.5
C9—C10—H10B109.3S1—C21—H21B109.5
C11—C10—H10B109.3H21A—C21—H21B109.5
H10A—C10—H10B108.0S1—C21—H21C109.5
C12—C11—C10110.8 (2)H21A—C21—H21C109.5
C12—C11—H11A109.5H21B—C21—H21C109.5
C10—C11—H11A109.5
O2—S1—C1—C8131.23 (16)C7—O1—C8—C15−176.16 (16)
C21—S1—C1—C8−118.80 (17)C3—C4—C9—C10−132.0 (2)
O2—S1—C1—C2−34.53 (17)C5—C4—C9—C1049.6 (3)
C21—S1—C1—C275.45 (16)C3—C4—C9—C14102.1 (2)
C8—C1—C2—C7−0.1 (2)C5—C4—C9—C14−76.3 (3)
S1—C1—C2—C7167.87 (14)C4—C9—C10—C11178.0 (2)
C8—C1—C2—C3−178.0 (2)C14—C9—C10—C11−55.5 (3)
S1—C1—C2—C3−10.0 (3)C9—C10—C11—C1256.3 (3)
C7—C2—C3—C4−1.0 (3)C10—C11—C12—C13−55.9 (3)
C1—C2—C3—C4176.7 (2)C11—C12—C13—C1455.2 (3)
C2—C3—C4—C50.5 (3)C10—C9—C14—C1354.5 (3)
C2—C3—C4—C9−177.98 (17)C4—C9—C14—C13−177.83 (17)
C3—C4—C5—C60.2 (4)C12—C13—C14—C9−54.7 (3)
C9—C4—C5—C6178.6 (2)C1—C8—C15—C16A39.3 (3)
C4—C5—C6—C7−0.3 (4)O1—C8—C15—C16A−143.89 (17)
C5—C6—C7—O1−178.3 (2)C1—C8—C15—C20A−139.2 (2)
C5—C6—C7—C2−0.2 (4)O1—C8—C15—C20A37.6 (2)
C8—O1—C7—C6176.9 (2)C20A—C15—C16A—F1A−174.72 (16)
C8—O1—C7—C2−1.4 (2)C8—C15—C16A—F1A6.7 (3)
C3—C2—C7—C60.9 (3)C20A—C15—C16A—C173.3 (3)
C1—C2—C7—C6−177.5 (2)C8—C15—C16A—C17−175.27 (17)
C3—C2—C7—O1179.23 (16)F1A—C16A—C17—C18176.19 (17)
C1—C2—C7—O10.9 (2)C15—C16A—C17—C18−1.9 (3)
C2—C1—C8—O1−0.8 (2)C16A—C17—C18—C19−0.5 (3)
S1—C1—C8—O1−168.73 (13)C17—C18—C19—C20A1.2 (3)
C2—C1—C8—C15176.11 (19)C18—C19—C20A—C150.4 (3)
S1—C1—C8—C158.2 (3)C16A—C15—C20A—C19−2.5 (3)
C7—O1—C8—C11.3 (2)C8—C15—C20A—C19176.08 (17)
D—H···AD—HH···AD···AD—H···A
C19—H19···O2ii0.952.443.220 (2)140
C21—H21A···O2i0.982.573.265 (2)128
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
C19—H19⋯O2i 0.952.443.220 (2)140
C21—H21A⋯O2ii 0.982.573.265 (2)128

Symmetry codes: (i) ; (ii) .

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