Literature DB >> 22590006

5-Cyclo-hexyl-2-(3-fluoro-phen-yl)-3-methyl-sulfinyl-1-benzofuran.

Hong Dae Choi, Pil Ja Seo, Uk Lee.   

Abstract

In the title compound, C(21)H(21)FO(2)S, the cyclo-hexyl ring adopts a chair conformation. The 3-fluoro-phenyl ring makes a dihedral angle of 38.38 (6)° with the mean plane [r.m.s. deviation = 0.010 (1) Å] of the benzofuran fragment. In the crystal, mol-ecules are linked by weak C-H⋯O hydrogen bonds.

Entities:  

Year:  2012        PMID: 22590006      PMCID: PMC3343925          DOI: 10.1107/S1600536812008343

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background information and the crystal structures of related compounds, see: Choi et al. (2011a ▶,b ▶).

Experimental

Crystal data

C21H21FO2S M = 356.44 Orthorhombic, a = 12.7767 (10) Å b = 13.0764 (10) Å c = 10.7711 (8) Å V = 1799.6 (2) Å3 Z = 4 Mo Kα radiation μ = 0.20 mm−1 T = 173 K 0.34 × 0.24 × 0.20 mm

Data collection

Bruker SMART APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.935, T max = 0.961 17893 measured reflections 4503 independent reflections 4036 reflections with I > 2σ(I) R int = 0.058

Refinement

R[F 2 > 2σ(F 2)] = 0.041 wR(F 2) = 0.096 S = 1.03 4503 reflections 227 parameters 1 restraint H-atom parameters constrained Δρmax = 0.33 e Å−3 Δρmin = −0.25 e Å−3 Absolute structure: Flack (1983 ▶), 2131 Friedel pairs Flack parameter: −0.07 (7) Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and DIAMOND (Brandenburg, 1998 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812008343/bh2416sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812008343/bh2416Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812008343/bh2416Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C21H21FO2SDx = 1.316 Mg m3
Mr = 356.44Melting point: 443 K
Orthorhombic, Pna21Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2c -2nCell parameters from 4473 reflections
a = 12.7767 (10) Åθ = 2.5–28.1°
b = 13.0764 (10) ŵ = 0.20 mm1
c = 10.7711 (8) ÅT = 173 K
V = 1799.6 (2) Å3Block, colourless
Z = 40.34 × 0.24 × 0.20 mm
F(000) = 752
Bruker SMART APEXII CCD diffractometer4503 independent reflections
Radiation source: rotating anode4036 reflections with I > 2σ(I)
Graphite multilayer monochromatorRint = 0.058
Detector resolution: 10.0 pixels mm-1θmax = 28.4°, θmin = 2.2°
φ and ω scansh = −17→17
Absorption correction: multi-scan (SADABS; Bruker, 2009)k = −17→16
Tmin = 0.935, Tmax = 0.961l = −14→14
17893 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.041H-atom parameters constrained
wR(F2) = 0.096w = 1/[σ2(Fo2) + (0.0426P)2 + 0.2167P] where P = (Fo2 + 2Fc2)/3
S = 1.03(Δ/σ)max < 0.001
4503 reflectionsΔρmax = 0.33 e Å3
227 parametersΔρmin = −0.25 e Å3
1 restraintAbsolute structure: Flack (1983), 2131 Friedel pairs
0 constraintsFlack parameter: −0.07 (7)
Primary atom site location: structure-invariant direct methods
xyzUiso*/Ueq
S10.56575 (3)0.02701 (3)0.35040 (5)0.02691 (11)
F10.77633 (15)0.11534 (12)−0.03264 (18)0.0792 (6)
O10.46206 (10)0.30803 (10)0.29361 (13)0.0277 (3)
O20.56405 (11)−0.00184 (12)0.48474 (14)0.0390 (4)
C10.49571 (12)0.14257 (13)0.33717 (18)0.0234 (3)
C20.40393 (13)0.17197 (14)0.40656 (17)0.0231 (3)
C30.33673 (13)0.12486 (14)0.49109 (16)0.0254 (4)
H30.34750.05550.51430.031*
C40.25446 (14)0.17975 (15)0.54083 (17)0.0257 (4)
C50.24014 (14)0.28249 (15)0.5060 (2)0.0296 (4)
H50.18330.31960.54080.036*
C60.30589 (14)0.33145 (15)0.42275 (19)0.0287 (4)
H60.29570.40090.39970.034*
C70.38672 (13)0.27399 (14)0.37531 (16)0.0260 (4)
C80.52756 (14)0.22666 (14)0.27291 (16)0.0256 (4)
C90.17818 (14)0.12816 (16)0.62864 (17)0.0287 (4)
H90.20640.05850.64690.034*
C100.16664 (19)0.1834 (2)0.7521 (2)0.0443 (5)
H10A0.14390.25470.73670.053*
H10B0.23540.18580.79430.053*
C110.08727 (19)0.1306 (2)0.8365 (2)0.0554 (7)
H11A0.11530.06340.86250.067*
H11B0.07670.17250.91210.067*
C12−0.01698 (19)0.1153 (2)0.7722 (3)0.0573 (8)
H12A−0.06420.07610.82730.069*
H12B−0.04950.18270.75640.069*
C13−0.00474 (18)0.0591 (2)0.6512 (3)0.0494 (6)
H13A−0.07360.05400.60950.059*
H13B0.0206−0.01120.66760.059*
C140.07219 (16)0.1139 (2)0.5661 (2)0.0405 (5)
H14A0.04340.18160.54310.049*
H14B0.08130.07370.48900.049*
C150.61838 (13)0.24653 (16)0.19341 (17)0.0269 (4)
C160.65392 (17)0.17134 (18)0.1135 (2)0.0389 (5)
H160.61720.10860.10510.047*
C170.74380 (18)0.18950 (19)0.0462 (2)0.0457 (6)
C180.79812 (17)0.27964 (19)0.0536 (2)0.0421 (5)
H180.86040.28960.00690.051*
C190.76030 (16)0.35559 (19)0.1303 (2)0.0376 (5)
H190.79570.41940.13490.045*
C200.67083 (14)0.33938 (16)0.20081 (19)0.0306 (4)
H200.64550.39170.25410.037*
C210.47422 (18)−0.05631 (16)0.2771 (2)0.0378 (5)
H21A0.5009−0.12660.27940.057*
H21B0.4644−0.03520.19050.057*
H21C0.4071−0.05300.32090.057*
U11U22U33U12U13U23
S10.02477 (19)0.0252 (2)0.0307 (2)0.00363 (16)0.00124 (19)0.0016 (2)
F10.0930 (12)0.0564 (10)0.0883 (13)0.0007 (9)0.0641 (10)−0.0086 (9)
O10.0257 (6)0.0243 (7)0.0332 (7)−0.0006 (5)0.0024 (5)0.0051 (6)
O20.0457 (9)0.0377 (8)0.0335 (8)0.0094 (7)−0.0076 (7)0.0065 (7)
C10.0219 (7)0.0237 (8)0.0246 (9)−0.0008 (6)0.0011 (7)0.0004 (8)
C20.0207 (7)0.0243 (9)0.0243 (8)0.0011 (7)−0.0022 (6)0.0010 (7)
C30.0255 (8)0.0236 (9)0.0272 (9)0.0014 (7)0.0001 (7)0.0023 (7)
C40.0246 (9)0.0267 (10)0.0256 (9)0.0020 (7)0.0008 (7)0.0007 (7)
C50.0248 (9)0.0291 (10)0.0350 (10)0.0042 (7)0.0020 (7)−0.0021 (8)
C60.0279 (9)0.0232 (9)0.0352 (10)0.0026 (7)−0.0013 (8)0.0013 (8)
C70.0219 (8)0.0262 (9)0.0301 (10)−0.0030 (7)−0.0022 (7)0.0023 (7)
C80.0244 (8)0.0264 (10)0.0260 (9)0.0005 (7)−0.0019 (7)0.0011 (7)
C90.0284 (9)0.0306 (10)0.0271 (9)0.0055 (7)0.0042 (7)0.0033 (8)
C100.0440 (12)0.0575 (15)0.0315 (11)−0.0056 (11)0.0084 (9)−0.0057 (10)
C110.0643 (15)0.0647 (17)0.0373 (13)−0.0022 (12)0.0242 (12)−0.0026 (13)
C120.0434 (13)0.0520 (15)0.077 (2)0.0069 (12)0.0309 (13)0.0186 (14)
C130.0353 (11)0.0559 (16)0.0571 (15)−0.0109 (11)0.0033 (10)0.0208 (12)
C140.0383 (12)0.0457 (14)0.0376 (11)−0.0115 (10)−0.0014 (9)0.0124 (10)
C150.0250 (8)0.0297 (10)0.0261 (9)0.0002 (7)0.0008 (7)0.0066 (7)
C160.0445 (12)0.0335 (12)0.0387 (12)−0.0035 (9)0.0140 (9)0.0040 (9)
C170.0474 (13)0.0440 (14)0.0457 (13)0.0073 (11)0.0228 (11)0.0087 (11)
C180.0297 (10)0.0564 (15)0.0402 (12)0.0000 (10)0.0101 (9)0.0163 (11)
C190.0295 (10)0.0448 (13)0.0386 (11)−0.0125 (9)−0.0027 (9)0.0095 (10)
C200.0289 (9)0.0315 (11)0.0312 (10)−0.0024 (8)−0.0044 (8)0.0049 (8)
C210.0447 (12)0.0281 (10)0.0406 (12)−0.0025 (9)−0.0070 (9)−0.0039 (9)
S1—O21.4954 (15)C11—C121.515 (4)
S1—C11.7620 (17)C11—H11A0.9900
S1—C211.783 (2)C11—H11B0.9900
F1—C171.355 (3)C12—C131.505 (4)
O1—C81.372 (2)C12—H12A0.9900
O1—C71.378 (2)C12—H12B0.9900
C1—C81.361 (3)C13—C141.523 (3)
C1—C21.443 (2)C13—H13A0.9900
C2—C71.393 (3)C13—H13B0.9900
C2—C31.395 (2)C14—H14A0.9900
C3—C41.381 (2)C14—H14B0.9900
C3—H30.9500C15—C161.383 (3)
C4—C51.407 (3)C15—C201.389 (3)
C4—C91.516 (3)C16—C171.378 (3)
C5—C61.385 (3)C16—H160.9500
C5—H50.9500C17—C181.370 (3)
C6—C71.376 (3)C18—C191.379 (3)
C6—H60.9500C18—H180.9500
C8—C151.465 (2)C19—C201.389 (3)
C9—C101.520 (3)C19—H190.9500
C9—C141.524 (3)C20—H200.9500
C9—H91.0000C21—H21A0.9800
C10—C111.527 (3)C21—H21B0.9800
C10—H10A0.9900C21—H21C0.9800
C10—H10B0.9900
O2—S1—C1106.69 (9)C10—C11—H11B109.3
O2—S1—C21105.37 (10)H11A—C11—H11B107.9
C1—S1—C2198.93 (9)C13—C12—C11111.69 (19)
C8—O1—C7106.23 (14)C13—C12—H12A109.3
C8—C1—C2106.92 (15)C11—C12—H12A109.3
C8—C1—S1125.59 (13)C13—C12—H12B109.3
C2—C1—S1126.83 (13)C11—C12—H12B109.3
C7—C2—C3118.91 (16)H12A—C12—H12B107.9
C7—C2—C1104.97 (15)C12—C13—C14111.0 (2)
C3—C2—C1136.11 (17)C12—C13—H13A109.4
C4—C3—C2119.48 (17)C14—C13—H13A109.4
C4—C3—H3120.3C12—C13—H13B109.4
C2—C3—H3120.3C14—C13—H13B109.4
C3—C4—C5119.46 (17)H13A—C13—H13B108.0
C3—C4—C9120.00 (17)C13—C14—C9111.42 (18)
C5—C4—C9120.51 (16)C13—C14—H14A109.3
C6—C5—C4122.35 (17)C9—C14—H14A109.3
C6—C5—H5118.8C13—C14—H14B109.3
C4—C5—H5118.8C9—C14—H14B109.3
C7—C6—C5116.31 (17)H14A—C14—H14B108.0
C7—C6—H6121.8C16—C15—C20119.90 (18)
C5—C6—H6121.8C16—C15—C8119.84 (18)
C6—C7—O1125.82 (17)C20—C15—C8120.22 (18)
C6—C7—C2123.48 (17)C17—C16—C15118.6 (2)
O1—C7—C2110.69 (15)C17—C16—H16120.7
C1—C8—O1111.19 (15)C15—C16—H16120.7
C1—C8—C15132.60 (17)F1—C17—C18119.79 (19)
O1—C8—C15116.14 (16)F1—C17—C16117.5 (2)
C4—C9—C10113.34 (18)C18—C17—C16122.7 (2)
C4—C9—C14110.48 (16)C17—C18—C19118.5 (2)
C10—C9—C14111.02 (18)C17—C18—H18120.8
C4—C9—H9107.2C19—C18—H18120.8
C10—C9—H9107.2C18—C19—C20120.4 (2)
C14—C9—H9107.2C18—C19—H19119.8
C9—C10—C11111.7 (2)C20—C19—H19119.8
C9—C10—H10A109.3C19—C20—C15119.9 (2)
C11—C10—H10A109.3C19—C20—H20120.0
C9—C10—H10B109.3C15—C20—H20120.0
C11—C10—H10B109.3S1—C21—H21A109.5
H10A—C10—H10B107.9S1—C21—H21B109.5
C12—C11—C10111.8 (2)H21A—C21—H21B109.5
C12—C11—H11A109.3S1—C21—H21C109.5
C10—C11—H11A109.3H21A—C21—H21C109.5
C12—C11—H11B109.3H21B—C21—H21C109.5
O2—S1—C1—C8133.15 (16)C7—O1—C8—C15−176.61 (15)
C21—S1—C1—C8−117.75 (17)C3—C4—C9—C10125.5 (2)
O2—S1—C1—C2−36.29 (18)C5—C4—C9—C10−56.7 (2)
C21—S1—C1—C272.81 (18)C3—C4—C9—C14−109.2 (2)
C8—C1—C2—C71.11 (19)C5—C4—C9—C1468.6 (2)
S1—C1—C2—C7172.15 (13)C4—C9—C10—C11178.61 (19)
C8—C1—C2—C3−177.8 (2)C14—C9—C10—C1153.6 (3)
S1—C1—C2—C3−6.8 (3)C9—C10—C11—C12−53.3 (3)
C7—C2—C3—C40.6 (3)C10—C11—C12—C1354.5 (3)
C1—C2—C3—C4179.4 (2)C11—C12—C13—C14−55.9 (3)
C2—C3—C4—C5−0.4 (3)C12—C13—C14—C956.4 (3)
C2—C3—C4—C9177.44 (16)C4—C9—C14—C13178.2 (2)
C3—C4—C5—C60.0 (3)C10—C9—C14—C13−55.2 (3)
C9—C4—C5—C6−177.75 (18)C1—C8—C15—C1639.0 (3)
C4—C5—C6—C70.0 (3)O1—C8—C15—C16−144.42 (19)
C5—C6—C7—O1−178.59 (17)C1—C8—C15—C20−139.0 (2)
C5—C6—C7—C20.2 (3)O1—C8—C15—C2037.6 (2)
C8—O1—C7—C6178.97 (17)C20—C15—C16—C172.5 (3)
C8—O1—C7—C20.04 (19)C8—C15—C16—C17−175.5 (2)
C3—C2—C7—C6−0.5 (3)C15—C16—C17—F1−179.1 (2)
C1—C2—C7—C6−179.67 (17)C15—C16—C17—C18−1.3 (4)
C3—C2—C7—O1178.43 (15)F1—C17—C18—C19176.9 (2)
C1—C2—C7—O1−0.7 (2)C16—C17—C18—C19−0.9 (4)
C2—C1—C8—O1−1.1 (2)C17—C18—C19—C201.8 (3)
S1—C1—C8—O1−172.33 (13)C18—C19—C20—C15−0.6 (3)
C2—C1—C8—C15175.59 (19)C16—C15—C20—C19−1.6 (3)
S1—C1—C8—C154.4 (3)C8—C15—C20—C19176.39 (18)
C7—O1—C8—C10.71 (19)
D—H···AD—HH···AD···AD—H···A
C21—H21B···O2i0.982.303.276 (3)176
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C21—H21B⋯O2i0.982.303.276 (3)176

Symmetry code: (i) .

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  5-Cyclo-hexyl-2-(4-fluoro-phen-yl)-3-methyl-sulfinyl-1-benzofuran.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-01-22

3.  5-Cyclo-hexyl-3-methyl-sulfinyl-2-phenyl-1-benzofuran.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-01-08
  3 in total
  2 in total

1.  5-Cyclo-hexyl-2-(2-fluoro-phen-yl)-3-methyl-sulfinyl-1-benzo-furan.

Authors:  Hong Dae Choi; Pil Ja Seo; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-05-15

2.  5-Cyclo-hexyl-3-ethyl-sulfinyl-2-(3-fluoro-phen-yl)-1-benzo-furan.

Authors:  Hong Dae Choi; Pil Ja Seo; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-08-23
  2 in total

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