Literature DB >> 23795052

2-Chloro-1-(2,4,4-trimethyl-2,3,4,5-tetra-hydro-1H-1,5-benzodiazepin-1-yl)ethanone.

V Thiruselvam1, D Deepa Rajakumari, A Akila, S Ponnuswamy, M N Ponnuswamy.   

Abstract

In the title compound, C14H19ClN2O, the n class="Chemical">diazepine ring adopts a boat conformation. The Cl atom of the chloro-acetyl group is trans to the N atom of the diazepine ring. In the crystal, the mol-ecules form chains running along the diagonal of the ac plane through N-H⋯O hydrogen bonds.

Entities:  

Year:  2013        PMID: 23795052      PMCID: PMC3685033          DOI: 10.1107/S1600536813012324

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activity of benzodiazepine derivatives, see: Ponnuswamy et al. (2006 ▶); Rahbaek et al. (1999 ▶). For related structures see: Thiruvalluvar & Ponnuswamy (2007 ▶); Kavitha et al. (2012 ▶). For puckering parameters, see: Cremer & Pople (1975 ▶) and for asymmetry parameters, see: n class="Chemical">Nardelli (1983 ▶). For bond-length data, see: Allen et al. (1987 ▶).

Experimental

Crystal data

C14H19ClN2O M = 266.76 Monoclinic, a = 10.3971 (3) Å b = 12.2589 (3) Å c = 11.0994 (3) Å β = 93.953 (1)° V = 1411.33 (7) Å3 Z = 4 Mo Kα radiation μ = 0.26 mm−1 T = 293 K 0.23 × 0.22 × 0.20 mm

Data collection

Bruker SMART APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2008 ▶) T min = 0.942, T max = 0.949 13339 measured reflections 3568 independent reflections 2767 reflections with I > 2σ(I) R int = 0.018

Refinement

R[F 2 > 2σ(F 2)] = 0.040 wR(F 2) = 0.120 S = 1.07 3568 reflections 167 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.22 e Å−3 Δρmin = −0.27 e Å−3 Data collection: APEX2 (Bruker, 2008 ▶); cell refinement: SAIn class="Chemical">NT (Bruker, 2008 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▶); software used to prepare material for publication: SHELXL97 and PLATON (Spek, 2009 ▶). Click here for additional data file. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536813012324/bt6901sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813012324/bt6901Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536813012324/bt6901Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C14H19ClN2OF(000) = 568
Mr = 266.76Dx = 1.255 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 3568 reflections
a = 10.3971 (3) Åθ = 2.5–28.5°
b = 12.2589 (3) ŵ = 0.26 mm1
c = 11.0994 (3) ÅT = 293 K
β = 93.953 (1)°Block, pale yellow
V = 1411.33 (7) Å30.23 × 0.22 × 0.20 mm
Z = 4
Bruker SMART APEXII CCD diffractometer3568 independent reflections
Radiation source: fine-focus sealed tube2767 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.018
ω and φ scansθmax = 28.5°, θmin = 2.5°
Absorption correction: multi-scan (SADABS; Bruker, 2008)h = −11→13
Tmin = 0.942, Tmax = 0.949k = −16→14
13339 measured reflectionsl = −14→14
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.040Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.120H atoms treated by a mixture of independent and constrained refinement
S = 1.07w = 1/[σ2(Fo2) + (0.0584P)2 + 0.253P] where P = (Fo2 + 2Fc2)/3
3568 reflections(Δ/σ)max < 0.001
167 parametersΔρmax = 0.22 e Å3
0 restraintsΔρmin = −0.27 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C20.51697 (13)0.25960 (11)0.45502 (13)0.0430 (3)
C30.42704 (13)0.16143 (11)0.43872 (12)0.0418 (3)
H3A0.47030.09890.47670.050*
H3B0.35110.17590.48220.050*
C40.38266 (12)0.12997 (12)0.31006 (12)0.0421 (3)
H40.32970.18970.27510.051*
C60.61213 (12)0.07242 (11)0.29286 (11)0.0378 (3)
C70.65316 (15)−0.02988 (12)0.25761 (13)0.0472 (3)
H70.5998−0.07200.20550.057*
C80.77192 (16)−0.06946 (13)0.29912 (15)0.0557 (4)
H80.7995−0.13770.27490.067*
C90.84918 (16)−0.00669 (15)0.37691 (16)0.0584 (4)
H90.9311−0.03140.40260.070*
C100.80708 (14)0.09221 (13)0.41727 (13)0.0490 (3)
H100.86000.13210.47200.059*
C110.68638 (12)0.13399 (11)0.37769 (11)0.0373 (3)
C120.5320 (2)0.28786 (16)0.58975 (16)0.0687 (5)
H12A0.56500.22570.63440.103*
H12B0.44960.30780.61710.103*
H12C0.59080.34780.60210.103*
C130.46332 (16)0.35866 (13)0.38470 (19)0.0635 (5)
H13A0.52170.41890.39700.095*
H13B0.38100.37800.41270.095*
H13C0.45350.34130.30020.095*
C140.30135 (17)0.02757 (15)0.30537 (17)0.0618 (4)
H14A0.27490.01080.22290.093*
H14B0.22650.03890.34990.093*
H14C0.3510−0.03190.34040.093*
C150.48304 (13)0.14054 (13)0.11892 (12)0.0449 (3)
C160.60674 (15)0.13616 (16)0.05310 (14)0.0554 (4)
H16A0.62530.06110.03270.067*
H16B0.67800.16330.10570.067*
N10.64710 (12)0.23518 (10)0.41521 (12)0.0446 (3)
H10.7043 (18)0.2675 (14)0.4580 (16)0.057 (5)*
N50.49529 (10)0.11740 (9)0.23764 (9)0.0394 (3)
O10.38003 (10)0.16453 (13)0.06665 (10)0.0683 (4)
Cl10.59194 (4)0.21546 (4)−0.07992 (4)0.06677 (17)
U11U22U33U12U13U23
C20.0408 (7)0.0429 (7)0.0454 (7)0.0064 (6)0.0046 (6)−0.0003 (6)
C30.0388 (7)0.0465 (7)0.0405 (7)0.0047 (6)0.0059 (5)0.0050 (5)
C40.0304 (6)0.0524 (8)0.0436 (7)0.0024 (6)0.0021 (5)0.0048 (6)
C60.0312 (6)0.0460 (7)0.0359 (6)0.0047 (5)−0.0011 (5)0.0016 (5)
C70.0464 (8)0.0492 (8)0.0458 (7)0.0031 (6)0.0013 (6)−0.0063 (6)
C80.0541 (9)0.0532 (8)0.0599 (9)0.0185 (7)0.0053 (7)−0.0055 (7)
C90.0413 (8)0.0722 (10)0.0605 (9)0.0220 (7)−0.0050 (7)−0.0028 (8)
C100.0371 (7)0.0616 (9)0.0467 (7)0.0073 (6)−0.0082 (6)−0.0028 (6)
C110.0330 (6)0.0436 (7)0.0350 (6)0.0037 (5)0.0009 (5)0.0029 (5)
C120.0760 (12)0.0747 (12)0.0563 (10)−0.0039 (9)0.0107 (9)−0.0193 (8)
C130.0508 (9)0.0459 (9)0.0940 (13)0.0107 (7)0.0068 (9)0.0146 (8)
C140.0490 (9)0.0716 (11)0.0649 (10)−0.0161 (8)0.0047 (7)−0.0021 (8)
C150.0334 (7)0.0613 (9)0.0393 (7)−0.0025 (6)−0.0036 (5)0.0043 (6)
C160.0420 (8)0.0808 (11)0.0434 (7)−0.0005 (7)0.0018 (6)0.0056 (7)
N10.0350 (6)0.0442 (6)0.0537 (7)0.0002 (5)−0.0026 (5)−0.0073 (5)
N50.0294 (5)0.0513 (6)0.0369 (5)0.0030 (5)−0.0025 (4)0.0014 (5)
O10.0380 (6)0.1162 (10)0.0492 (6)0.0051 (6)−0.0072 (5)0.0230 (6)
Cl10.0581 (3)0.0963 (4)0.0461 (2)−0.0130 (2)0.00504 (18)0.01223 (19)
C2—N11.4825 (18)C10—C111.3979 (18)
C2—C31.527 (2)C10—H100.9300
C2—C131.528 (2)C11—N11.3793 (17)
C2—C121.532 (2)C12—H12A0.9600
C3—C41.5199 (19)C12—H12B0.9600
C3—H3A0.9700C12—H12C0.9600
C3—H3B0.9700C13—H13A0.9600
C4—N51.4734 (16)C13—H13B0.9600
C4—C141.512 (2)C13—H13C0.9600
C4—H40.9800C14—H14A0.9600
C6—C71.3896 (19)C14—H14B0.9600
C6—C111.3971 (18)C14—H14C0.9600
C6—N51.4327 (16)C15—O11.2184 (17)
C7—C81.376 (2)C15—N51.3453 (17)
C7—H70.9300C15—C161.523 (2)
C8—C91.374 (2)C16—Cl11.7656 (16)
C8—H80.9300C16—H16A0.9700
C9—C101.374 (2)C16—H16B0.9700
C9—H90.9300N1—H10.835 (19)
N1—C2—C3111.68 (11)C6—C11—C10117.15 (12)
N1—C2—C13108.47 (12)C2—C12—H12A109.5
C3—C2—C13111.52 (12)C2—C12—H12B109.5
N1—C2—C12107.62 (13)H12A—C12—H12B109.5
C3—C2—C12108.31 (12)C2—C12—H12C109.5
C13—C2—C12109.14 (14)H12A—C12—H12C109.5
C4—C3—C2117.06 (11)H12B—C12—H12C109.5
C4—C3—H3A108.0C2—C13—H13A109.5
C2—C3—H3A108.0C2—C13—H13B109.5
C4—C3—H3B108.0H13A—C13—H13B109.5
C2—C3—H3B108.0C2—C13—H13C109.5
H3A—C3—H3B107.3H13A—C13—H13C109.5
N5—C4—C14110.96 (12)H13B—C13—H13C109.5
N5—C4—C3109.75 (10)C4—C14—H14A109.5
C14—C4—C3112.07 (12)C4—C14—H14B109.5
N5—C4—H4108.0H14A—C14—H14B109.5
C14—C4—H4108.0C4—C14—H14C109.5
C3—C4—H4108.0H14A—C14—H14C109.5
C7—C6—C11120.75 (12)H14B—C14—H14C109.5
C7—C6—N5119.64 (12)O1—C15—N5122.55 (13)
C11—C6—N5119.56 (12)O1—C15—C16121.58 (13)
C8—C7—C6120.64 (14)N5—C15—C16115.87 (12)
C8—C7—H7119.7C15—C16—Cl1110.72 (11)
C6—C7—H7119.7C15—C16—H16A109.5
C9—C8—C7119.02 (14)Cl1—C16—H16A109.5
C9—C8—H8120.5C15—C16—H16B109.5
C7—C8—H8120.5Cl1—C16—H16B109.5
C8—C9—C10120.89 (14)H16A—C16—H16B108.1
C8—C9—H9119.6C11—N1—C2124.54 (12)
C10—C9—H9119.6C11—N1—H1112.6 (12)
C9—C10—C11121.33 (14)C2—N1—H1111.3 (12)
C9—C10—H10119.3C15—N5—C6121.36 (11)
C11—C10—H10119.3C15—N5—C4119.16 (11)
N1—C11—C6121.87 (12)C6—N5—C4119.29 (10)
N1—C11—C10120.84 (12)
N1—C2—C3—C4−70.58 (15)C6—C11—N1—C248.60 (19)
C13—C2—C3—C450.97 (17)C10—C11—N1—C2−135.87 (15)
C12—C2—C3—C4171.08 (13)C3—C2—N1—C11−5.18 (19)
C2—C3—C4—N552.53 (16)C13—C2—N1—C11−128.48 (15)
C2—C3—C4—C14176.30 (12)C12—C2—N1—C11113.57 (15)
C11—C6—C7—C8−4.6 (2)O1—C15—N5—C6169.69 (15)
N5—C6—C7—C8172.60 (14)C16—C15—N5—C6−10.9 (2)
C6—C7—C8—C90.5 (2)O1—C15—N5—C4−5.1 (2)
C7—C8—C9—C102.8 (3)C16—C15—N5—C4174.26 (13)
C8—C9—C10—C11−2.1 (3)C7—C6—N5—C15−63.37 (18)
C7—C6—C11—N1−179.24 (13)C11—C6—N5—C15113.83 (15)
N5—C6—C11—N13.60 (19)C7—C6—N5—C4111.44 (15)
C7—C6—C11—C105.1 (2)C11—C6—N5—C4−71.37 (16)
N5—C6—C11—C10−172.09 (12)C14—C4—N5—C1586.63 (16)
C9—C10—C11—N1−177.52 (15)C3—C4—N5—C15−148.96 (12)
C9—C10—C11—C6−1.8 (2)C14—C4—N5—C6−88.29 (15)
O1—C15—C16—Cl121.9 (2)C3—C4—N5—C636.11 (17)
N5—C15—C16—Cl1−157.53 (12)
D—H···AD—HH···AD···AD—H···A
N1—H1···O1i0.835 (19)2.276 (19)3.1049 (16)171.5 (17)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N1—H1⋯O1i 0.835 (19)2.276 (19)3.1049 (16)171.5 (17)

Symmetry code: (i) .

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

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Authors:  Lisa Rahbaek; Jens Breinholt; Jens C. Frisvad; Carsten Christophersen
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3.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
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  1 in total

1.  Crystal structure of 2,2,4-trimethyl-2,3,4,5-tetra-hydro-1H-benzo[b][1,4]diazepine hemihydrate.

Authors:  K S Ezhilarasi; A Akila; S Ponnuswamy; B K Revathi; G Usha
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2015-07-15
  1 in total

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