Literature DB >> 23795047

1-(4-Hy-droxy-phen-yl)-2-(2-oxidonaphthalen-1-yl)diazen-1-ium methanol hemisolvate.

Mohamed Amine Benaouida1, Souheyla Chetioui, Salah Eddine Bouaoud.   

Abstract

In the title compound, C16H12N2O2·0.5CH3OH, the H atom of the -OH group has been transfered to the N atom in the azo group, forming a zwitterion. Hence, there is an intra-molecular N-H⋯O, rather than an O-H⋯N, hydrogen bond in the mol-ecule. The mol-ecule is almost planar, the dihedral angle between the benzene ring and the mean plane of the naphthalene ring system being 4.51 (6)°. In the crystal, mol-ecules are linked to and bridged by O-H⋯O hydrogen bonds involving the methanol mol-ecule, which is located about a twofold rotation axis, and hence half-occupied, forming zigzag chains along [001]. Mol-ecules are also linked via C-H⋯π and π-π inter-actions, the latter involving adjacent benzene and naphthalene rings and having a centroid-centroid distance of 3.6616 (13) Å, forming a three-dimensional network.

Entities:  

Year:  2013        PMID: 23795047      PMCID: PMC3685028          DOI: 10.1107/S1600536813012245

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For azo compounds in the fields of dyes, pigments and advanced materials, see: Lee et al. (2004 ▶); Oueslati et al. (2004 ▶). For the synthesis of azo compounds, see: Wang et al. (2003 ▶). For the structures of related compounds, see: Jin et al. (2008 ▶); Xu et al. (2010 ▶).

Experimental

Crystal data

C16H12N2O2·0.5CH4O M = 280.30 Monoclinic, a = 26.942 (7) Å b = 6.3479 (17) Å c = 17.579 (5) Å β = 113.985 (4)° V = 2746.8 (13) Å3 Z = 8 Mo Kα radiation μ = 0.09 mm−1 T = 293 K 0.26 × 0.06 × 0.05 mm

Data collection

Bruker APEXII CCD diffractometer 12992 measured reflections 4212 independent reflections 2286 reflections with I > 2σ(I) R int = 0.032

Refinement

R[F 2 > 2σ(F 2)] = 0.052 wR(F 2) = 0.154 S = 1.03 4212 reflections 202 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.18 e Å−3 Δρmin = −0.18 e Å−3 Data collection: APEX2 (Bruker, 2006 ▶); cell refinement: SAINT (Bruker, 2006 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2009 ▶); software used to prepare material for publication: WinGX publication routines (Farrugia, 2012 ▶). Click here for additional data file. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536813012245/su2594sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813012245/su2594Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536813012245/su2594Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C16H12N2O2·0.5CH4OF(000) = 1176
Mr = 280.30Least-squares treatment of 25 SET4 setting angles.
Monoclinic, C2/cDx = 1.356 Mg m3
Hall symbol: -C 2ycMo Kα radiation, λ = 0.71073 Å
a = 26.942 (7) ÅCell parameters from 1832 reflections
b = 6.3479 (17) Åθ = 2.4–25.7°
c = 17.579 (5) ŵ = 0.09 mm1
β = 113.985 (4)°T = 293 K
V = 2746.8 (13) Å3Prismatic, red
Z = 80.26 × 0.06 × 0.05 mm
Bruker APEXII CCD diffractometer2286 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.032
Graphite monochromatorθmax = 30.7°, θmin = 2.4°
phi and ω scansh = −38→37
12992 measured reflectionsk = −8→9
4212 independent reflectionsl = −24→24
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.052Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.154H atoms treated by a mixture of independent and constrained refinement
S = 1.03w = 1/[σ2(Fo2) + (0.0652P)2 + 0.3604P] where P = (Fo2 + 2Fc2)/3
4212 reflections(Δ/σ)max = 0.001
202 parametersΔρmax = 0.18 e Å3
0 restraintsΔρmin = −0.18 e Å3
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell esds are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
O10.05411 (5)0.9010 (2)0.10115 (8)0.0693 (5)
O20.09325 (5)1.7942 (2)−0.17549 (9)0.0775 (5)
N10.13875 (5)0.98315 (19)0.04654 (7)0.0426 (4)
N20.09869 (5)1.1128 (2)0.02339 (7)0.0454 (4)
C10.13793 (5)0.8158 (2)0.09375 (8)0.0408 (4)
C20.09520 (6)0.7749 (3)0.12016 (10)0.0516 (5)
C30.09810 (7)0.5873 (3)0.16635 (10)0.0563 (6)
C40.13956 (6)0.4517 (3)0.18484 (9)0.0510 (5)
C50.18354 (6)0.4878 (2)0.16088 (8)0.0439 (5)
C60.18351 (5)0.6722 (2)0.11622 (8)0.0402 (4)
C70.22698 (6)0.3453 (3)0.18175 (9)0.0529 (5)
C80.26920 (7)0.3855 (3)0.16014 (10)0.0590 (6)
C90.26971 (6)0.5681 (3)0.11681 (10)0.0565 (6)
C100.22765 (6)0.7090 (3)0.09506 (9)0.0482 (5)
C110.09846 (5)1.2857 (2)−0.02644 (8)0.0421 (4)
C120.05513 (6)1.4243 (3)−0.04920 (10)0.0505 (5)
C130.05257 (6)1.5962 (3)−0.09868 (10)0.0555 (5)
C140.09319 (6)1.6298 (2)−0.12578 (9)0.0507 (5)
C150.13698 (6)1.4922 (2)−0.10218 (9)0.0497 (5)
C160.13961 (6)1.3214 (2)−0.05285 (9)0.0467 (5)
O1S−0.00722 (9)2.0049 (3)−0.21505 (14)0.0490 (7)0.500
C1S0.000002.1846 (5)−0.250000.0803 (14)
H2A0.072301.093800.038300.0540*
H2B0.063901.85490−0.191900.1160*
H3A0.070600.558300.184000.0680*
H4A0.139700.329900.214300.0610*
H7A0.226900.222500.210600.0630*
H8A0.297800.290400.174400.0710*
H9A0.298800.594700.102500.0680*
H10A0.228400.830400.065900.0580*
H12A0.027601.40130−0.031100.0610*
H13A0.023501.68920−0.113700.0670*
H15A0.164701.51600−0.119900.0600*
H16A0.169001.22980−0.037200.0560*
H1SA−0.035 (2)2.289 (9)−0.284 (3)0.1210*0.500
H1O−0.021002.04990−0.177900.0740*0.500
H1SB0.0081 (13)2.124 (4)−0.2876 (18)0.1210*
U11U22U33U12U13U23
O10.0529 (7)0.0772 (9)0.0909 (9)0.0092 (6)0.0428 (6)0.0195 (7)
O20.0765 (9)0.0569 (8)0.0916 (9)0.0183 (7)0.0265 (8)0.0293 (7)
N10.0401 (6)0.0436 (7)0.0416 (6)−0.0025 (5)0.0140 (5)−0.0025 (5)
N20.0390 (6)0.0523 (8)0.0480 (7)−0.0009 (6)0.0209 (5)0.0012 (6)
C10.0407 (7)0.0440 (8)0.0368 (7)−0.0082 (6)0.0148 (6)−0.0020 (6)
C20.0462 (8)0.0579 (10)0.0513 (8)−0.0068 (7)0.0206 (7)0.0019 (8)
C30.0542 (9)0.0640 (11)0.0575 (9)−0.0095 (8)0.0298 (8)0.0059 (8)
C40.0584 (9)0.0525 (10)0.0423 (8)−0.0109 (8)0.0207 (7)0.0026 (7)
C50.0480 (8)0.0463 (9)0.0346 (7)−0.0061 (7)0.0139 (6)−0.0019 (6)
C60.0420 (7)0.0431 (8)0.0339 (7)−0.0057 (6)0.0137 (5)−0.0033 (6)
C70.0627 (10)0.0472 (9)0.0451 (8)−0.0005 (8)0.0181 (7)0.0033 (7)
C80.0598 (10)0.0561 (11)0.0604 (10)0.0137 (8)0.0238 (8)0.0054 (8)
C90.0508 (9)0.0624 (11)0.0618 (10)0.0030 (8)0.0284 (8)0.0031 (8)
C100.0495 (8)0.0500 (9)0.0486 (8)−0.0012 (7)0.0235 (7)0.0034 (7)
C110.0420 (7)0.0430 (8)0.0392 (7)−0.0017 (6)0.0144 (6)−0.0034 (6)
C120.0401 (7)0.0571 (10)0.0548 (9)0.0040 (7)0.0197 (7)−0.0062 (8)
C130.0443 (8)0.0492 (10)0.0638 (10)0.0121 (7)0.0124 (7)−0.0031 (8)
C140.0518 (9)0.0412 (9)0.0516 (8)0.0063 (7)0.0134 (7)0.0015 (7)
C150.0509 (8)0.0481 (9)0.0544 (9)0.0072 (7)0.0259 (7)0.0060 (7)
C160.0436 (7)0.0472 (9)0.0506 (8)0.0105 (7)0.0205 (6)0.0050 (7)
O1S0.0556 (12)0.0450 (13)0.0529 (12)0.0055 (11)0.0286 (10)0.0051 (10)
C1S0.105 (3)0.058 (2)0.090 (2)0.00000.052 (2)0.0000
O1—C21.295 (2)C11—C161.384 (2)
O2—C141.362 (2)C11—C121.385 (2)
O2—H2B0.8200C12—C131.380 (3)
O1S—C1S1.347 (3)C13—C141.376 (2)
O1S—H1SBi0.76 (3)C14—C151.389 (2)
O1S—H1O0.9200C15—C161.372 (2)
N1—N21.2848 (19)C3—H3A0.9300
N1—C11.3538 (18)C4—H4A0.9300
N2—C111.4027 (18)C7—H7A0.9300
N2—H2A0.8600C8—H8A0.9300
C1—C61.449 (2)C9—H9A0.9300
C1—C21.429 (2)C10—H10A0.9300
C2—C31.426 (3)C12—H12A0.9300
C3—C41.341 (3)C13—H13A0.9300
C4—C51.428 (2)C15—H15A0.9300
C5—C71.405 (2)C16—H16A0.9300
C5—C61.4093 (19)C1S—H1SA1.11 (6)
C6—C101.402 (2)C1S—H1SB0.87 (3)
C7—C81.362 (3)C1S—H1SAi1.11 (6)
C8—C91.390 (3)C1S—H1SBi0.87 (3)
C9—C101.370 (3)
C14—O2—H2B109.00C4—C3—H3A119.00
C1S—O1S—H1O104.00C2—C3—H3A119.00
C1S—O1S—H1SBi37 (2)C3—C4—H4A119.00
H1O—O1S—H1SBi67.00C5—C4—H4A119.00
N2—N1—C1118.42 (14)C5—C7—H7A120.00
N1—N2—C11119.27 (13)C8—C7—H7A120.00
N1—N2—H2A120.00C9—C8—H8A120.00
C11—N2—H2A120.00C7—C8—H8A120.00
C2—C1—C6120.15 (13)C8—C9—H9A120.00
N1—C1—C2123.90 (14)C10—C9—H9A120.00
N1—C1—C6115.94 (13)C6—C10—H10A120.00
O1—C2—C1121.39 (16)C9—C10—H10A120.00
O1—C2—C3120.43 (16)C11—C12—H12A120.00
C1—C2—C3118.16 (16)C13—C12—H12A120.00
C2—C3—C4121.44 (18)C12—C13—H13A120.00
C3—C4—C5122.32 (16)C14—C13—H13A120.00
C4—C5—C7121.51 (14)C16—C15—H15A120.00
C6—C5—C7119.48 (15)C14—C15—H15A120.00
C4—C5—C6119.01 (14)C11—C16—H16A120.00
C1—C6—C5118.87 (13)C15—C16—H16A120.00
C1—C6—C10122.60 (13)O1S—C1S—O1Si64.2 (2)
C5—C6—C10118.53 (14)O1S—C1S—H1SA120 (3)
C5—C7—C8120.54 (16)O1S—C1S—H1SB95.7 (18)
C7—C8—C9120.30 (18)O1S—C1S—H1SAi121 (3)
C8—C9—C10120.39 (17)O1S—C1S—H1SBi31.5 (18)
C6—C10—C9120.76 (16)H1SA—C1S—H1SB106 (3)
N2—C11—C12117.83 (14)O1Si—C1S—H1SA121 (3)
N2—C11—C16122.48 (13)H1SA—C1S—H1SAi107 (4)
C12—C11—C16119.70 (13)H1SA—C1S—H1SBi105 (4)
C11—C12—C13120.33 (16)O1Si—C1S—H1SB31.5 (18)
C12—C13—C14119.86 (16)H1SAi—C1S—H1SB105 (4)
O2—C14—C13123.34 (15)H1SB—C1S—H1SBi127 (3)
C13—C14—C15119.84 (14)O1Si—C1S—H1SAi120 (3)
O2—C14—C15116.82 (15)O1Si—C1S—H1SBi95.7 (18)
C14—C15—C16120.34 (16)H1SAi—C1S—H1SBi106 (3)
C11—C16—C15119.93 (14)
C1—N1—N2—C11−179.19 (12)C7—C5—C6—C1178.85 (13)
N2—N1—C1—C2−0.5 (2)C7—C5—C6—C10−1.0 (2)
N2—N1—C1—C6178.51 (12)C4—C5—C7—C8−178.29 (15)
N1—N2—C11—C12−178.98 (13)C6—C5—C7—C80.9 (2)
N1—N2—C11—C160.9 (2)C1—C6—C10—C9−179.35 (14)
N1—C1—C2—O1−1.3 (2)C5—C6—C10—C90.5 (2)
N1—C1—C2—C3177.00 (14)C5—C7—C8—C9−0.2 (2)
C6—C1—C2—O1179.78 (14)C7—C8—C9—C10−0.3 (3)
C6—C1—C2—C3−2.0 (2)C8—C9—C10—C60.2 (2)
N1—C1—C6—C5−176.08 (12)N2—C11—C12—C13−179.50 (14)
N1—C1—C6—C103.72 (19)C16—C11—C12—C130.7 (2)
C2—C1—C6—C52.97 (19)N2—C11—C16—C15179.40 (13)
C2—C1—C6—C10−177.23 (14)C12—C11—C16—C15−0.8 (2)
O1—C2—C3—C4178.23 (16)C11—C12—C13—C140.2 (2)
C1—C2—C3—C40.0 (2)C12—C13—C14—O2179.21 (15)
C2—C3—C4—C51.1 (3)C12—C13—C14—C15−0.9 (2)
C3—C4—C5—C60.0 (2)O2—C14—C15—C16−179.31 (13)
C3—C4—C5—C7179.16 (15)C13—C14—C15—C160.8 (2)
C4—C5—C6—C1−1.97 (19)C14—C15—C16—C110.0 (2)
C4—C5—C6—C10178.22 (13)
D—H···AD—HH···AD···AD—H···A
O1S—H1O···O1ii0.921.922.832 (3)171
N2—H2A···O10.861.842.540 (2)137
O2—H2B···O1S0.822.032.841 (3)172
O2—H2B···O1Si0.821.972.690 (3)146
C1S—H1SA···Cg3iii1.11 (6)2.58 (5)3.555 (2)147 (4)
C7—H7A···Cg2iv0.932.733.521 (2)144
Table 1

Hydrogen-bond geometry (Å, °)

Cg2 and Cg3 are the centroids of the C5–C10 and C11–C16 rings, respectively.

D—H⋯A D—HH⋯A DA D—H⋯A
O1S—H1O⋯O1i 0.921.922.832 (3)171
N2—H2A⋯O10.861.842.540 (2)137
O2—H2B⋯O1S 0.822.032.841 (3)172
O2—H2B⋯O1S ii 0.821.972.690 (3)146
C1S—H1SACg3iii 1.11 (6)2.58 (5)3.555 (2)147 (4)
C7—H7ACg2iv 0.932.733.521 (2)144

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

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