| Literature DB >> 23795047 |
Mohamed Amine Benaouida1, Souheyla Chetioui, Salah Eddine Bouaoud.
Abstract
In the title compound, C16H12N2O2·0.5CH3OH, the H atom of the -OH group has been transfered to the N atom in the azo group, forming a zwitterion. Hence, there is an intra-molecular N-H⋯O, rather than an O-H⋯N, hydrogen bond in the mol-ecule. The mol-ecule is almost planar, the dihedral angle between the benzene ring and the mean plane of the naphthalene ring system being 4.51 (6)°. In the crystal, mol-ecules are linked to and bridged by O-H⋯O hydrogen bonds involving the methanol mol-ecule, which is located about a twofold rotation axis, and hence half-occupied, forming zigzag chains along [001]. Mol-ecules are also linked via C-H⋯π and π-π inter-actions, the latter involving adjacent benzene and naphthalene rings and having a centroid-centroid distance of 3.6616 (13) Å, forming a three-dimensional network.Entities:
Year: 2013 PMID: 23795047 PMCID: PMC3685028 DOI: 10.1107/S1600536813012245
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C16H12N2O2·0.5CH4O | |
| Least-squares treatment of 25 SET4 setting angles. | |
| Monoclinic, | |
| Hall symbol: -C 2yc | Mo |
| Cell parameters from 1832 reflections | |
| θ = 2.4–25.7° | |
| µ = 0.09 mm−1 | |
| β = 113.985 (4)° | |
| Prismatic, red | |
| 0.26 × 0.06 × 0.05 mm |
| Bruker APEXII CCD diffractometer | 2286 reflections with |
| Radiation source: fine-focus sealed tube | |
| Graphite monochromator | θmax = 30.7°, θmin = 2.4° |
| phi and ω scans | |
| 12992 measured reflections | |
| 4212 independent reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 4212 reflections | (Δ/σ)max = 0.001 |
| 202 parameters | Δρmax = 0.18 e Å−3 |
| 0 restraints | Δρmin = −0.18 e Å−3 |
| Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell esds are taken into account in the estimation of distances, angles and torsion angles |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| Occ. (<1) | |||||
| O1 | 0.05411 (5) | 0.9010 (2) | 0.10115 (8) | 0.0693 (5) | |
| O2 | 0.09325 (5) | 1.7942 (2) | −0.17549 (9) | 0.0775 (5) | |
| N1 | 0.13875 (5) | 0.98315 (19) | 0.04654 (7) | 0.0426 (4) | |
| N2 | 0.09869 (5) | 1.1128 (2) | 0.02339 (7) | 0.0454 (4) | |
| C1 | 0.13793 (5) | 0.8158 (2) | 0.09375 (8) | 0.0408 (4) | |
| C2 | 0.09520 (6) | 0.7749 (3) | 0.12016 (10) | 0.0516 (5) | |
| C3 | 0.09810 (7) | 0.5873 (3) | 0.16635 (10) | 0.0563 (6) | |
| C4 | 0.13956 (6) | 0.4517 (3) | 0.18484 (9) | 0.0510 (5) | |
| C5 | 0.18354 (6) | 0.4878 (2) | 0.16088 (8) | 0.0439 (5) | |
| C6 | 0.18351 (5) | 0.6722 (2) | 0.11622 (8) | 0.0402 (4) | |
| C7 | 0.22698 (6) | 0.3453 (3) | 0.18175 (9) | 0.0529 (5) | |
| C8 | 0.26920 (7) | 0.3855 (3) | 0.16014 (10) | 0.0590 (6) | |
| C9 | 0.26971 (6) | 0.5681 (3) | 0.11681 (10) | 0.0565 (6) | |
| C10 | 0.22765 (6) | 0.7090 (3) | 0.09506 (9) | 0.0482 (5) | |
| C11 | 0.09846 (5) | 1.2857 (2) | −0.02644 (8) | 0.0421 (4) | |
| C12 | 0.05513 (6) | 1.4243 (3) | −0.04920 (10) | 0.0505 (5) | |
| C13 | 0.05257 (6) | 1.5962 (3) | −0.09868 (10) | 0.0555 (5) | |
| C14 | 0.09319 (6) | 1.6298 (2) | −0.12578 (9) | 0.0507 (5) | |
| C15 | 0.13698 (6) | 1.4922 (2) | −0.10218 (9) | 0.0497 (5) | |
| C16 | 0.13961 (6) | 1.3214 (2) | −0.05285 (9) | 0.0467 (5) | |
| O1S | −0.00722 (9) | 2.0049 (3) | −0.21505 (14) | 0.0490 (7) | 0.500 |
| C1S | 0.00000 | 2.1846 (5) | −0.25000 | 0.0803 (14) | |
| H2A | 0.07230 | 1.09380 | 0.03830 | 0.0540* | |
| H2B | 0.06390 | 1.85490 | −0.19190 | 0.1160* | |
| H3A | 0.07060 | 0.55830 | 0.18400 | 0.0680* | |
| H4A | 0.13970 | 0.32990 | 0.21430 | 0.0610* | |
| H7A | 0.22690 | 0.22250 | 0.21060 | 0.0630* | |
| H8A | 0.29780 | 0.29040 | 0.17440 | 0.0710* | |
| H9A | 0.29880 | 0.59470 | 0.10250 | 0.0680* | |
| H10A | 0.22840 | 0.83040 | 0.06590 | 0.0580* | |
| H12A | 0.02760 | 1.40130 | −0.03110 | 0.0610* | |
| H13A | 0.02350 | 1.68920 | −0.11370 | 0.0670* | |
| H15A | 0.16470 | 1.51600 | −0.11990 | 0.0600* | |
| H16A | 0.16900 | 1.22980 | −0.03720 | 0.0560* | |
| H1SA | −0.035 (2) | 2.289 (9) | −0.284 (3) | 0.1210* | 0.500 |
| H1O | −0.02100 | 2.04990 | −0.17790 | 0.0740* | 0.500 |
| H1SB | 0.0081 (13) | 2.124 (4) | −0.2876 (18) | 0.1210* |
| O1 | 0.0529 (7) | 0.0772 (9) | 0.0909 (9) | 0.0092 (6) | 0.0428 (6) | 0.0195 (7) |
| O2 | 0.0765 (9) | 0.0569 (8) | 0.0916 (9) | 0.0183 (7) | 0.0265 (8) | 0.0293 (7) |
| N1 | 0.0401 (6) | 0.0436 (7) | 0.0416 (6) | −0.0025 (5) | 0.0140 (5) | −0.0025 (5) |
| N2 | 0.0390 (6) | 0.0523 (8) | 0.0480 (7) | −0.0009 (6) | 0.0209 (5) | 0.0012 (6) |
| C1 | 0.0407 (7) | 0.0440 (8) | 0.0368 (7) | −0.0082 (6) | 0.0148 (6) | −0.0020 (6) |
| C2 | 0.0462 (8) | 0.0579 (10) | 0.0513 (8) | −0.0068 (7) | 0.0206 (7) | 0.0019 (8) |
| C3 | 0.0542 (9) | 0.0640 (11) | 0.0575 (9) | −0.0095 (8) | 0.0298 (8) | 0.0059 (8) |
| C4 | 0.0584 (9) | 0.0525 (10) | 0.0423 (8) | −0.0109 (8) | 0.0207 (7) | 0.0026 (7) |
| C5 | 0.0480 (8) | 0.0463 (9) | 0.0346 (7) | −0.0061 (7) | 0.0139 (6) | −0.0019 (6) |
| C6 | 0.0420 (7) | 0.0431 (8) | 0.0339 (7) | −0.0057 (6) | 0.0137 (5) | −0.0033 (6) |
| C7 | 0.0627 (10) | 0.0472 (9) | 0.0451 (8) | −0.0005 (8) | 0.0181 (7) | 0.0033 (7) |
| C8 | 0.0598 (10) | 0.0561 (11) | 0.0604 (10) | 0.0137 (8) | 0.0238 (8) | 0.0054 (8) |
| C9 | 0.0508 (9) | 0.0624 (11) | 0.0618 (10) | 0.0030 (8) | 0.0284 (8) | 0.0031 (8) |
| C10 | 0.0495 (8) | 0.0500 (9) | 0.0486 (8) | −0.0012 (7) | 0.0235 (7) | 0.0034 (7) |
| C11 | 0.0420 (7) | 0.0430 (8) | 0.0392 (7) | −0.0017 (6) | 0.0144 (6) | −0.0034 (6) |
| C12 | 0.0401 (7) | 0.0571 (10) | 0.0548 (9) | 0.0040 (7) | 0.0197 (7) | −0.0062 (8) |
| C13 | 0.0443 (8) | 0.0492 (10) | 0.0638 (10) | 0.0121 (7) | 0.0124 (7) | −0.0031 (8) |
| C14 | 0.0518 (9) | 0.0412 (9) | 0.0516 (8) | 0.0063 (7) | 0.0134 (7) | 0.0015 (7) |
| C15 | 0.0509 (8) | 0.0481 (9) | 0.0544 (9) | 0.0072 (7) | 0.0259 (7) | 0.0060 (7) |
| C16 | 0.0436 (7) | 0.0472 (9) | 0.0506 (8) | 0.0105 (7) | 0.0205 (6) | 0.0050 (7) |
| O1S | 0.0556 (12) | 0.0450 (13) | 0.0529 (12) | 0.0055 (11) | 0.0286 (10) | 0.0051 (10) |
| C1S | 0.105 (3) | 0.058 (2) | 0.090 (2) | 0.0000 | 0.052 (2) | 0.0000 |
| O1—C2 | 1.295 (2) | C11—C16 | 1.384 (2) |
| O2—C14 | 1.362 (2) | C11—C12 | 1.385 (2) |
| O2—H2B | 0.8200 | C12—C13 | 1.380 (3) |
| O1S—C1S | 1.347 (3) | C13—C14 | 1.376 (2) |
| O1S—H1SBi | 0.76 (3) | C14—C15 | 1.389 (2) |
| O1S—H1O | 0.9200 | C15—C16 | 1.372 (2) |
| N1—N2 | 1.2848 (19) | C3—H3A | 0.9300 |
| N1—C1 | 1.3538 (18) | C4—H4A | 0.9300 |
| N2—C11 | 1.4027 (18) | C7—H7A | 0.9300 |
| N2—H2A | 0.8600 | C8—H8A | 0.9300 |
| C1—C6 | 1.449 (2) | C9—H9A | 0.9300 |
| C1—C2 | 1.429 (2) | C10—H10A | 0.9300 |
| C2—C3 | 1.426 (3) | C12—H12A | 0.9300 |
| C3—C4 | 1.341 (3) | C13—H13A | 0.9300 |
| C4—C5 | 1.428 (2) | C15—H15A | 0.9300 |
| C5—C7 | 1.405 (2) | C16—H16A | 0.9300 |
| C5—C6 | 1.4093 (19) | C1S—H1SA | 1.11 (6) |
| C6—C10 | 1.402 (2) | C1S—H1SB | 0.87 (3) |
| C7—C8 | 1.362 (3) | C1S—H1SAi | 1.11 (6) |
| C8—C9 | 1.390 (3) | C1S—H1SBi | 0.87 (3) |
| C9—C10 | 1.370 (3) | ||
| C14—O2—H2B | 109.00 | C4—C3—H3A | 119.00 |
| C1S—O1S—H1O | 104.00 | C2—C3—H3A | 119.00 |
| C1S—O1S—H1SBi | 37 (2) | C3—C4—H4A | 119.00 |
| H1O—O1S—H1SBi | 67.00 | C5—C4—H4A | 119.00 |
| N2—N1—C1 | 118.42 (14) | C5—C7—H7A | 120.00 |
| N1—N2—C11 | 119.27 (13) | C8—C7—H7A | 120.00 |
| N1—N2—H2A | 120.00 | C9—C8—H8A | 120.00 |
| C11—N2—H2A | 120.00 | C7—C8—H8A | 120.00 |
| C2—C1—C6 | 120.15 (13) | C8—C9—H9A | 120.00 |
| N1—C1—C2 | 123.90 (14) | C10—C9—H9A | 120.00 |
| N1—C1—C6 | 115.94 (13) | C6—C10—H10A | 120.00 |
| O1—C2—C1 | 121.39 (16) | C9—C10—H10A | 120.00 |
| O1—C2—C3 | 120.43 (16) | C11—C12—H12A | 120.00 |
| C1—C2—C3 | 118.16 (16) | C13—C12—H12A | 120.00 |
| C2—C3—C4 | 121.44 (18) | C12—C13—H13A | 120.00 |
| C3—C4—C5 | 122.32 (16) | C14—C13—H13A | 120.00 |
| C4—C5—C7 | 121.51 (14) | C16—C15—H15A | 120.00 |
| C6—C5—C7 | 119.48 (15) | C14—C15—H15A | 120.00 |
| C4—C5—C6 | 119.01 (14) | C11—C16—H16A | 120.00 |
| C1—C6—C5 | 118.87 (13) | C15—C16—H16A | 120.00 |
| C1—C6—C10 | 122.60 (13) | O1S—C1S—O1Si | 64.2 (2) |
| C5—C6—C10 | 118.53 (14) | O1S—C1S—H1SA | 120 (3) |
| C5—C7—C8 | 120.54 (16) | O1S—C1S—H1SB | 95.7 (18) |
| C7—C8—C9 | 120.30 (18) | O1S—C1S—H1SAi | 121 (3) |
| C8—C9—C10 | 120.39 (17) | O1S—C1S—H1SBi | 31.5 (18) |
| C6—C10—C9 | 120.76 (16) | H1SA—C1S—H1SB | 106 (3) |
| N2—C11—C12 | 117.83 (14) | O1Si—C1S—H1SA | 121 (3) |
| N2—C11—C16 | 122.48 (13) | H1SA—C1S—H1SAi | 107 (4) |
| C12—C11—C16 | 119.70 (13) | H1SA—C1S—H1SBi | 105 (4) |
| C11—C12—C13 | 120.33 (16) | O1Si—C1S—H1SB | 31.5 (18) |
| C12—C13—C14 | 119.86 (16) | H1SAi—C1S—H1SB | 105 (4) |
| O2—C14—C13 | 123.34 (15) | H1SB—C1S—H1SBi | 127 (3) |
| C13—C14—C15 | 119.84 (14) | O1Si—C1S—H1SAi | 120 (3) |
| O2—C14—C15 | 116.82 (15) | O1Si—C1S—H1SBi | 95.7 (18) |
| C14—C15—C16 | 120.34 (16) | H1SAi—C1S—H1SBi | 106 (3) |
| C11—C16—C15 | 119.93 (14) | ||
| C1—N1—N2—C11 | −179.19 (12) | C7—C5—C6—C1 | 178.85 (13) |
| N2—N1—C1—C2 | −0.5 (2) | C7—C5—C6—C10 | −1.0 (2) |
| N2—N1—C1—C6 | 178.51 (12) | C4—C5—C7—C8 | −178.29 (15) |
| N1—N2—C11—C12 | −178.98 (13) | C6—C5—C7—C8 | 0.9 (2) |
| N1—N2—C11—C16 | 0.9 (2) | C1—C6—C10—C9 | −179.35 (14) |
| N1—C1—C2—O1 | −1.3 (2) | C5—C6—C10—C9 | 0.5 (2) |
| N1—C1—C2—C3 | 177.00 (14) | C5—C7—C8—C9 | −0.2 (2) |
| C6—C1—C2—O1 | 179.78 (14) | C7—C8—C9—C10 | −0.3 (3) |
| C6—C1—C2—C3 | −2.0 (2) | C8—C9—C10—C6 | 0.2 (2) |
| N1—C1—C6—C5 | −176.08 (12) | N2—C11—C12—C13 | −179.50 (14) |
| N1—C1—C6—C10 | 3.72 (19) | C16—C11—C12—C13 | 0.7 (2) |
| C2—C1—C6—C5 | 2.97 (19) | N2—C11—C16—C15 | 179.40 (13) |
| C2—C1—C6—C10 | −177.23 (14) | C12—C11—C16—C15 | −0.8 (2) |
| O1—C2—C3—C4 | 178.23 (16) | C11—C12—C13—C14 | 0.2 (2) |
| C1—C2—C3—C4 | 0.0 (2) | C12—C13—C14—O2 | 179.21 (15) |
| C2—C3—C4—C5 | 1.1 (3) | C12—C13—C14—C15 | −0.9 (2) |
| C3—C4—C5—C6 | 0.0 (2) | O2—C14—C15—C16 | −179.31 (13) |
| C3—C4—C5—C7 | 179.16 (15) | C13—C14—C15—C16 | 0.8 (2) |
| C4—C5—C6—C1 | −1.97 (19) | C14—C15—C16—C11 | 0.0 (2) |
| C4—C5—C6—C10 | 178.22 (13) |
| H··· | ||||
| O1 | 0.92 | 1.92 | 2.832 (3) | 171 |
| N2—H2 | 0.86 | 1.84 | 2.540 (2) | 137 |
| O2—H2 | 0.82 | 2.03 | 2.841 (3) | 172 |
| O2—H2 | 0.82 | 1.97 | 2.690 (3) | 146 |
| C1 | 1.11 (6) | 2.58 (5) | 3.555 (2) | 147 (4) |
| C7—H7 | 0.93 | 2.73 | 3.521 (2) | 144 |
Hydrogen-bond geometry (Å, °)
Cg2 and Cg3 are the centroids of the C5–C10 and C11–C16 rings, respectively.
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| O1 | 0.92 | 1.92 | 2.832 (3) | 171 |
| N2—H2 | 0.86 | 1.84 | 2.540 (2) | 137 |
| O2—H2 | 0.82 | 2.03 | 2.841 (3) | 172 |
| O2—H2 | 0.82 | 1.97 | 2.690 (3) | 146 |
| C1 | 1.11 (6) | 2.58 (5) | 3.555 (2) | 147 (4) |
| C7—H7 | 0.93 | 2.73 | 3.521 (2) | 144 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .