Literature DB >> 23795038

5-Methyl-N-(1,3-thia-zol-2-yl)isoxazole-4-carboxamide.

De-Cai Wang1, Xiang Sun, Peng Su, Ping-Kai Ou-Yang.   

Abstract

In the title compound, C8H7N3O2S, the dihedral angle between the thia-zol and isoxazole rings is 34.08 (13)°. In the crystal, the mol-ecules are linked by pairs of N-H⋯N hydrogen bonds, forming inversion dimers, and C-H⋯O inter-actions, resulting in chains along the b-axis direction.

Entities:  

Year:  2013        PMID: 23795038      PMCID: PMC3684936          DOI: 10.1107/S1600536813012105

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to isoxazole-containing drugs, see: Shaw et al. (2011 ▶); Schattenkirchner (2000 ▶); Huang et al. (2003 ▶). For the crystal structure of a related compound, see: Wang et al. (2011 ▶).

Experimental

Crystal data

C8H7N3O2S M = 209.23 Monoclinic, a = 8.8460 (18) Å b = 10.742 (2) Å c = 10.024 (2) Å β = 107.27 (3)° V = 909.6 (3) Å3 Z = 4 Mo Kα radiation μ = 0.33 mm−1 T = 293 K 0.30 × 0.20 × 0.10 mm

Data collection

Enraf–Nonius CAD-4 diffractometer Absorption correction: ψ scan (North et al., 1968 ▶) T min = 0.907, T max = 0.968 3462 measured reflections 1676 independent reflections 1298 reflections with I > 2σ(I) R int = 0.060 3 standard reflections every 200 reflections intensity decay: 1%

Refinement

R[F 2 > 2σ(F 2)] = 0.051 wR(F 2) = 0.152 S = 1.00 1676 reflections 128 parameters H-atom parameters constrained Δρmax = 0.38 e Å−3 Δρmin = −0.34 e Å−3 Data collection: CAD-4 EXPRESS (Enraf–Nonius,1994) ▶; cell refinement: CAD-4 EXPRESS; data reduction: XCAD4 (Harms & Wocadlo,1995 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: PLATON (Spek, 2009 ▶). Click here for additional data file. Crystal structure: contains datablock(s) I, New_Global_Publ_Block. DOI: 10.1107/S1600536813012105/pv2631sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813012105/pv2631Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536813012105/pv2631Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C8H7N3O2SF(000) = 432
Mr = 209.23Dx = 1.528 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 25 reflections
a = 8.8460 (18) Åθ = 10–13°
b = 10.742 (2) ŵ = 0.33 mm1
c = 10.024 (2) ÅT = 293 K
β = 107.27 (3)°Block, yellow
V = 909.6 (3) Å30.30 × 0.20 × 0.10 mm
Z = 4
Enraf–Nonius CAD-4 diffractometer1298 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.060
Graphite monochromatorθmax = 25.4°, θmin = 2.4°
ω/2θ scansh = 0→10
Absorption correction: ψ scan (North et al., 1968)k = −12→12
Tmin = 0.907, Tmax = 0.968l = −12→11
3462 measured reflections3 standard reflections every 200 reflections
1676 independent reflections intensity decay: 1%
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.051H-atom parameters constrained
wR(F2) = 0.152w = 1/[σ2(Fo2) + (0.1P)2 + 0.180P] where P = (Fo2 + 2Fc2)/3
S = 1.00(Δ/σ)max < 0.001
1676 reflectionsΔρmax = 0.38 e Å3
128 parametersΔρmin = −0.34 e Å3
0 restraintsExtinction correction: SHELXL, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.021 (5)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S0.27245 (9)0.30807 (7)0.46506 (9)0.0578 (3)
O10.5024 (2)0.36916 (17)0.3546 (2)0.0517 (6)
N10.3255 (3)0.0745 (2)0.5154 (2)0.0463 (6)
C10.1512 (4)0.2266 (3)0.5378 (4)0.0629 (9)
H1A0.06540.26050.56070.075*
O20.8730 (2)0.2660 (2)0.1941 (2)0.0532 (6)
N20.5011 (2)0.16438 (19)0.4088 (2)0.0390 (5)
H2A0.54750.09380.41060.047*
C20.1958 (3)0.1078 (3)0.5573 (3)0.0558 (8)
H2B0.14260.05070.59690.067*
N30.8148 (3)0.1439 (3)0.1552 (3)0.0569 (7)
C30.3761 (3)0.1719 (2)0.4640 (3)0.0371 (6)
C40.5547 (3)0.2644 (2)0.3512 (3)0.0358 (5)
C50.6762 (3)0.2373 (2)0.2825 (2)0.0349 (5)
C60.6993 (3)0.1306 (3)0.2088 (3)0.0459 (6)
H6A0.63840.05870.19980.055*
C70.7873 (3)0.3192 (2)0.2679 (3)0.0395 (6)
C80.8309 (4)0.4479 (3)0.3178 (3)0.0546 (7)
H8A0.91690.47610.28550.082*
H8B0.86260.44930.41800.082*
H8C0.74130.50180.28210.082*
U11U22U33U12U13U23
S0.0540 (5)0.0548 (5)0.0796 (6)0.0179 (3)0.0427 (4)0.0136 (4)
O10.0510 (12)0.0391 (10)0.0740 (14)0.0077 (8)0.0325 (10)0.0069 (9)
N10.0408 (12)0.0511 (13)0.0544 (13)0.0009 (10)0.0255 (10)0.0066 (11)
C10.0458 (17)0.081 (2)0.076 (2)0.0194 (16)0.0384 (16)0.0196 (18)
O20.0447 (11)0.0687 (13)0.0561 (12)−0.0065 (9)0.0302 (9)−0.0037 (10)
N20.0395 (11)0.0359 (10)0.0499 (12)0.0032 (9)0.0260 (10)0.0014 (9)
C20.0403 (15)0.076 (2)0.0595 (17)0.0020 (14)0.0282 (13)0.0169 (15)
N30.0598 (15)0.0630 (15)0.0570 (15)0.0005 (13)0.0312 (12)−0.0131 (12)
C30.0320 (12)0.0434 (14)0.0378 (13)0.0024 (10)0.0133 (10)−0.0014 (10)
C40.0314 (12)0.0372 (12)0.0410 (13)0.0014 (10)0.0144 (10)−0.0008 (10)
C50.0329 (12)0.0382 (13)0.0356 (12)0.0004 (10)0.0132 (10)0.0014 (10)
C60.0498 (15)0.0436 (14)0.0482 (15)−0.0031 (12)0.0207 (12)−0.0060 (12)
C70.0358 (13)0.0501 (15)0.0351 (13)0.0006 (11)0.0143 (11)0.0039 (10)
C80.0531 (17)0.0512 (16)0.0616 (18)−0.0123 (13)0.0203 (14)0.0034 (14)
S—C11.707 (3)N2—H2A0.8600
S—C31.729 (2)C2—H2B0.9300
O1—C41.222 (3)N3—C61.296 (4)
N1—C31.303 (3)C4—C51.468 (3)
N1—C21.381 (3)C5—C71.358 (4)
C1—C21.332 (5)C5—C61.411 (4)
C1—H1A0.9300C6—H6A0.9300
O2—C71.334 (3)C7—C81.483 (4)
O2—N31.420 (3)C8—H8A0.9600
N2—C41.369 (3)C8—H8B0.9600
N2—C31.377 (3)C8—H8C0.9600
C1—S—C388.31 (14)O1—C4—C5122.1 (2)
C3—N1—C2109.1 (2)N2—C4—C5115.9 (2)
C2—C1—S111.0 (2)C7—C5—C6104.4 (2)
C2—C1—H1A124.5C7—C5—C4125.2 (2)
S—C1—H1A124.5C6—C5—C4130.3 (2)
C7—O2—N3109.2 (2)N3—C6—C5112.4 (3)
C4—N2—C3122.9 (2)N3—C6—H6A123.8
C4—N2—H2A118.5C5—C6—H6A123.8
C3—N2—H2A118.5O2—C7—C5109.3 (2)
C1—C2—N1116.1 (3)O2—C7—C8117.0 (2)
C1—C2—H2B122.0C5—C7—C8133.7 (3)
N1—C2—H2B122.0C7—C8—H8A109.5
C6—N3—O2104.7 (2)C7—C8—H8B109.5
N1—C3—N2121.6 (2)H8A—C8—H8B109.5
N1—C3—S115.55 (19)C7—C8—H8C109.5
N2—C3—S122.86 (19)H8A—C8—H8C109.5
O1—C4—N2122.0 (2)H8B—C8—H8C109.5
C3—S—C1—C20.8 (3)N2—C4—C5—C7−152.8 (2)
S—C1—C2—N1−0.6 (4)O1—C4—C5—C6−145.8 (3)
C3—N1—C2—C1−0.1 (4)N2—C4—C5—C632.8 (4)
C7—O2—N3—C6−0.6 (3)O2—N3—C6—C5−0.1 (3)
C2—N1—C3—N2−177.4 (2)C7—C5—C6—N30.8 (3)
C2—N1—C3—S0.7 (3)C4—C5—C6—N3176.1 (3)
C4—N2—C3—N1178.5 (2)N3—O2—C7—C51.2 (3)
C4—N2—C3—S0.6 (3)N3—O2—C7—C8−179.9 (2)
C1—S—C3—N1−0.9 (2)C6—C5—C7—O2−1.2 (3)
C1—S—C3—N2177.2 (2)C4—C5—C7—O2−176.7 (2)
C3—N2—C4—O15.7 (4)C6—C5—C7—C8−179.8 (3)
C3—N2—C4—C5−173.0 (2)C4—C5—C7—C84.6 (5)
O1—C4—C5—C728.5 (4)
D—H···AD—HH···AD···AD—H···A
N2—H2A···N1i0.862.142.970 (3)162
C6—H6A···O1ii0.932.363.287 (4)171
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N2—H2A⋯N1i 0.862.142.970 (3)162
C6—H6A⋯O1ii 0.932.363.287 (4)171

Symmetry codes: (i) ; (ii) .

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