Literature DB >> 23795012

2-(4-Fluoro-phen-yl)-5-iodo-7-methyl-3-phenyl-sulfinyl-1-benzo-furan.

Hong Dae Choi1, Pil Ja Seo, Uk Lee.   

Abstract

In the title compound, C21H14FIO2S, the dihedral angles between the mean plane [r.m.s. deviation = 0.007 (1) Å] of the benzo-furan fragment and the pendant 4-fluoro-phenyl and phenyl rings are 3.66 (7) and 82.37 (6)°, respectively. In the crystal, mol-ecules are linked by pairs of C-H⋯I hydrogen bonds into centrosymmetric dimers, which are further packed into stacks along the b axis by C-H⋯O hydrogen bonds. In addition, the stacked mol-ecules exhibit inversion-related S⋯O contacts [2.9627 (14) Å] involving the sulfinyl groups.

Entities:  

Year:  2013        PMID: 23795012      PMCID: PMC3684910          DOI: 10.1107/S1600536813011793

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background information and the crystal structures of related compounds, see: Choi et al. (2009 ▶, 2012 ▶). For details of sulfin­yl–sulfinyl inter­actions, see: Choi et al. (2008 ▶) and for a review of carbon­yl–carbonyl inter­actions, see: Allen et al. (1998 ▶).

Experimental

Crystal data

C21H14FIO2S M = 476.28 Triclinic, a = 8.1060 (3) Å b = 10.7771 (4) Å c = 11.2639 (4) Å α = 71.814 (2)° β = 74.496 (2)° γ = 79.038 (2)° V = 894.69 (6) Å3 Z = 2 Mo Kα radiation μ = 1.93 mm−1 T = 173 K 0.36 × 0.28 × 0.19 mm

Data collection

Bruker SMART APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.562, T max = 0.746 16292 measured reflections 4404 independent reflections 4125 reflections with I > 2σ(I) R int = 0.036

Refinement

R[F 2 > 2σ(F 2)] = 0.023 wR(F 2) = 0.062 S = 1.05 4404 reflections 236 parameters H-atom parameters constrained Δρmax = 0.37 e Å−3 Δρmin = −0.63 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▶) and DIAMOND (Brandenburg, 1998 ▶); software used to prepare material for publication: SHELXL97. Click here for additional data file. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536813011793/ld2102sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813011793/ld2102Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536813011793/ld2102Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C21H14FIO2SZ = 2
Mr = 476.28F(000) = 468
Triclinic, P1Dx = 1.768 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 8.1060 (3) ÅCell parameters from 6652 reflections
b = 10.7771 (4) Åθ = 2.6–28.4°
c = 11.2639 (4) ŵ = 1.93 mm1
α = 71.814 (2)°T = 173 K
β = 74.496 (2)°Block, colourless
γ = 79.038 (2)°0.36 × 0.28 × 0.19 mm
V = 894.69 (6) Å3
Bruker SMART APEXII CCD diffractometer4404 independent reflections
Radiation source: rotating anode4125 reflections with I > 2σ(I)
Graphite multilayer monochromatorRint = 0.036
Detector resolution: 10.0 pixels mm-1θmax = 28.3°, θmin = 2.0°
φ and ω scansh = −10→10
Absorption correction: multi-scan (SADABS; Bruker, 2009)k = −14→14
Tmin = 0.562, Tmax = 0.746l = −14→14
16292 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.023Hydrogen site location: difference Fourier map
wR(F2) = 0.062H-atom parameters constrained
S = 1.05w = 1/[σ2(Fo2) + (0.0291P)2 + 0.4238P] where P = (Fo2 + 2Fc2)/3
4404 reflections(Δ/σ)max = 0.002
236 parametersΔρmax = 0.37 e Å3
0 restraintsΔρmin = −0.63 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/Ueq
I11.038283 (17)0.207761 (13)1.022854 (12)0.03450 (6)
S10.88164 (6)0.15272 (4)0.52014 (4)0.02267 (9)
F10.52793 (19)0.62193 (14)0.03604 (12)0.0432 (3)
O10.76006 (17)0.52135 (12)0.54415 (12)0.0240 (3)
O21.03200 (17)0.08292 (13)0.57680 (14)0.0297 (3)
C10.8377 (2)0.30667 (17)0.55547 (17)0.0219 (3)
C20.8726 (2)0.32977 (17)0.66597 (17)0.0226 (3)
C30.9380 (2)0.25313 (18)0.77187 (18)0.0256 (4)
H30.97540.16190.78360.031*
C40.9455 (2)0.31737 (19)0.85932 (18)0.0263 (4)
C50.8945 (3)0.45161 (19)0.84379 (18)0.0274 (4)
H50.90380.49030.90650.033*
C60.8304 (2)0.52953 (18)0.73849 (18)0.0256 (4)
C70.8216 (2)0.46343 (17)0.65298 (17)0.0232 (3)
C80.7708 (2)0.42461 (17)0.48521 (17)0.0224 (3)
C90.7725 (3)0.67397 (19)0.7182 (2)0.0336 (4)
H9A0.77830.71630.62670.050*
H9B0.84790.71320.74800.050*
H9C0.65360.68680.76650.050*
C100.7072 (2)0.47139 (17)0.36758 (17)0.0234 (3)
C110.7151 (3)0.39187 (19)0.28875 (19)0.0285 (4)
H110.76260.30240.31200.034*
C120.6542 (3)0.4420 (2)0.17688 (19)0.0313 (4)
H120.65950.38800.12330.038*
C130.5866 (3)0.5714 (2)0.14591 (18)0.0305 (4)
C140.5757 (3)0.6538 (2)0.22019 (19)0.0315 (4)
H140.52790.74310.19580.038*
C150.6363 (3)0.60277 (19)0.33112 (18)0.0287 (4)
H150.62980.65800.38390.034*
C160.6935 (2)0.08351 (17)0.62724 (19)0.0253 (4)
C170.7012 (3)0.0107 (2)0.7511 (2)0.0351 (4)
H170.8053−0.00280.77940.042*
C180.5561 (3)−0.0422 (2)0.8336 (3)0.0457 (6)
H180.5598−0.09210.91910.055*
C190.4053 (3)−0.0223 (2)0.7911 (3)0.0484 (6)
H190.3053−0.05790.84810.058*
C200.3990 (3)0.0487 (3)0.6670 (3)0.0465 (6)
H200.29520.06110.63850.056*
C210.5442 (3)0.1020 (2)0.5834 (2)0.0343 (4)
H210.54110.15050.49750.041*
U11U22U33U12U13U23
I10.03624 (9)0.04058 (9)0.02868 (8)−0.00585 (6)−0.01368 (6)−0.00611 (6)
S10.0228 (2)0.01980 (19)0.0283 (2)0.00242 (16)−0.00949 (17)−0.01045 (16)
F10.0501 (8)0.0477 (7)0.0309 (6)−0.0013 (6)−0.0206 (6)−0.0025 (5)
O10.0290 (7)0.0186 (6)0.0250 (6)−0.0013 (5)−0.0063 (5)−0.0078 (5)
O20.0234 (6)0.0282 (7)0.0422 (8)0.0057 (5)−0.0148 (6)−0.0153 (6)
C10.0216 (8)0.0206 (8)0.0248 (8)−0.0013 (6)−0.0050 (7)−0.0091 (6)
C20.0213 (8)0.0227 (8)0.0259 (8)−0.0038 (6)−0.0048 (7)−0.0092 (7)
C30.0254 (9)0.0249 (8)0.0288 (9)−0.0039 (7)−0.0085 (7)−0.0077 (7)
C40.0248 (9)0.0311 (9)0.0241 (9)−0.0067 (7)−0.0074 (7)−0.0056 (7)
C50.0277 (9)0.0314 (9)0.0269 (9)−0.0091 (8)−0.0030 (7)−0.0126 (7)
C60.0275 (9)0.0243 (8)0.0264 (9)−0.0079 (7)−0.0016 (7)−0.0098 (7)
C70.0235 (8)0.0226 (8)0.0237 (8)−0.0042 (7)−0.0031 (7)−0.0076 (7)
C80.0218 (8)0.0217 (8)0.0246 (8)−0.0024 (6)−0.0025 (7)−0.0099 (7)
C90.0434 (12)0.0249 (9)0.0352 (10)−0.0051 (8)−0.0064 (9)−0.0135 (8)
C100.0221 (8)0.0227 (8)0.0237 (8)−0.0007 (7)−0.0031 (7)−0.0067 (7)
C110.0322 (10)0.0255 (9)0.0281 (9)0.0015 (7)−0.0095 (8)−0.0083 (7)
C120.0342 (10)0.0354 (10)0.0260 (9)−0.0029 (8)−0.0076 (8)−0.0110 (8)
C130.0279 (9)0.0365 (10)0.0236 (9)−0.0027 (8)−0.0078 (8)−0.0022 (8)
C140.0312 (10)0.0271 (9)0.0303 (10)0.0030 (8)−0.0073 (8)−0.0031 (8)
C150.0312 (10)0.0255 (9)0.0273 (9)0.0001 (7)−0.0050 (8)−0.0076 (7)
C160.0244 (9)0.0195 (8)0.0358 (10)0.0003 (7)−0.0100 (8)−0.0121 (7)
C170.0366 (11)0.0256 (9)0.0420 (12)−0.0042 (8)−0.0141 (9)−0.0031 (8)
C180.0474 (14)0.0339 (11)0.0486 (14)−0.0100 (10)−0.0034 (11)−0.0043 (10)
C190.0365 (12)0.0406 (13)0.0661 (17)−0.0133 (10)0.0050 (12)−0.0207 (12)
C200.0274 (11)0.0477 (13)0.0755 (18)−0.0037 (9)−0.0134 (11)−0.0312 (13)
C210.0285 (10)0.0350 (10)0.0471 (12)0.0010 (8)−0.0162 (9)−0.0186 (9)
I1—C42.0974 (19)C9—H9C0.9800
S1—O2i2.9627 (14)C10—C111.397 (3)
S1—O21.4920 (14)C10—C151.399 (3)
S1—C11.7748 (17)C11—C121.389 (3)
S1—C161.796 (2)C11—H110.9500
F1—C131.360 (2)C12—C131.369 (3)
O1—C71.368 (2)C12—H120.9500
O1—C81.379 (2)C13—C141.375 (3)
C1—C81.369 (2)C14—C151.379 (3)
C1—C21.449 (2)C14—H140.9500
C2—C71.393 (2)C15—H150.9500
C2—C31.394 (3)C16—C171.382 (3)
C3—C41.388 (3)C16—C211.383 (3)
C3—H30.9500C17—C181.383 (3)
C4—C51.396 (3)C17—H170.9500
C5—C61.387 (3)C18—C191.385 (4)
C5—H50.9500C18—H180.9500
C6—C71.387 (2)C19—C201.378 (4)
C6—C91.501 (3)C19—H190.9500
C8—C101.458 (3)C20—C211.390 (3)
C9—H9A0.9800C20—H200.9500
C9—H9B0.9800C21—H210.9500
O2—S1—C1105.04 (8)C11—C10—C15118.34 (17)
O2—S1—C16106.95 (9)C11—C10—C8123.24 (16)
C1—S1—C1697.02 (8)C15—C10—C8118.41 (16)
O2—S1—O2i78.36 (6)C12—C11—C10120.83 (18)
C1—S1—O2i172.01 (7)C12—C11—H11119.6
C16—S1—O2i88.76 (6)C10—C11—H11119.6
C7—O1—C8107.21 (13)C13—C12—C11118.25 (19)
C8—C1—C2107.21 (15)C13—C12—H12120.9
C8—C1—S1127.99 (14)C11—C12—H12120.9
C2—C1—S1124.78 (13)F1—C13—C12118.80 (19)
C7—C2—C3119.35 (17)F1—C13—C14117.99 (18)
C7—C2—C1104.84 (16)C12—C13—C14123.21 (19)
C3—C2—C1135.81 (17)C13—C14—C15117.99 (18)
C4—C3—C2116.34 (17)C13—C14—H14121.0
C4—C3—H3121.8C15—C14—H14121.0
C2—C3—H3121.8C14—C15—C10121.38 (18)
C3—C4—C5123.24 (18)C14—C15—H15119.3
C3—C4—I1118.53 (14)C10—C15—H15119.3
C5—C4—I1118.23 (14)C17—C16—C21121.16 (19)
C6—C5—C4121.18 (17)C17—C16—S1119.54 (15)
C6—C5—H5119.4C21—C16—S1119.29 (16)
C4—C5—H5119.4C16—C17—C18119.5 (2)
C5—C6—C7114.83 (17)C16—C17—H17120.3
C5—C6—C9123.14 (17)C18—C17—H17120.3
C7—C6—C9122.02 (18)C17—C18—C19119.7 (2)
O1—C7—C6124.22 (16)C17—C18—H18120.1
O1—C7—C2110.72 (15)C19—C18—H18120.1
C6—C7—C2125.06 (18)C20—C19—C18120.6 (2)
C1—C8—O1110.02 (16)C20—C19—H19119.7
C1—C8—C10136.31 (16)C18—C19—H19119.7
O1—C8—C10113.67 (15)C19—C20—C21120.1 (2)
C6—C9—H9A109.5C19—C20—H20120.0
C6—C9—H9B109.5C21—C20—H20120.0
H9A—C9—H9B109.5C16—C21—C20119.0 (2)
C6—C9—H9C109.5C16—C21—H21120.5
H9A—C9—H9C109.5C20—C21—H21120.5
H9B—C9—H9C109.5
O2—S1—C1—C8149.12 (17)S1—C1—C8—C102.6 (3)
C16—S1—C1—C8−101.17 (18)C7—O1—C8—C10.17 (19)
O2—S1—C1—C2−28.97 (18)C7—O1—C8—C10179.24 (15)
C16—S1—C1—C280.74 (17)C1—C8—C10—C11−5.0 (3)
C8—C1—C2—C70.3 (2)O1—C8—C10—C11176.23 (17)
S1—C1—C2—C7178.71 (13)C1—C8—C10—C15175.6 (2)
C8—C1—C2—C3179.5 (2)O1—C8—C10—C15−3.1 (2)
S1—C1—C2—C3−2.1 (3)C15—C10—C11—C120.1 (3)
C7—C2—C3—C40.8 (3)C8—C10—C11—C12−179.26 (18)
C1—C2—C3—C4−178.3 (2)C10—C11—C12—C130.1 (3)
C2—C3—C4—C5−1.2 (3)C11—C12—C13—F1179.46 (18)
C2—C3—C4—I1178.91 (13)C11—C12—C13—C14−0.1 (3)
C3—C4—C5—C60.7 (3)F1—C13—C14—C15−179.55 (18)
I1—C4—C5—C6−179.40 (14)C12—C13—C14—C150.0 (3)
C4—C5—C6—C70.2 (3)C13—C14—C15—C100.1 (3)
C4—C5—C6—C9179.44 (18)C11—C10—C15—C14−0.2 (3)
C8—O1—C7—C6−179.63 (17)C8—C10—C15—C14179.19 (18)
C8—O1—C7—C20.02 (19)O2—S1—C16—C1716.79 (18)
C5—C6—C7—O1178.99 (16)C1—S1—C16—C17−91.31 (16)
C9—C6—C7—O1−0.2 (3)O2—S1—C16—C21−162.03 (15)
C5—C6—C7—C2−0.6 (3)C1—S1—C16—C2189.87 (16)
C9—C6—C7—C2−179.84 (18)C21—C16—C17—C18−1.4 (3)
C3—C2—C7—O1−179.54 (16)S1—C16—C17—C18179.85 (17)
C1—C2—C7—O1−0.2 (2)C16—C17—C18—C190.3 (3)
C3—C2—C7—C60.1 (3)C17—C18—C19—C200.7 (4)
C1—C2—C7—C6179.46 (17)C18—C19—C20—C21−0.6 (4)
C2—C1—C8—O1−0.3 (2)C17—C16—C21—C201.5 (3)
S1—C1—C8—O1−178.64 (13)S1—C16—C21—C20−179.72 (16)
C2—C1—C8—C10−179.0 (2)C19—C20—C21—C16−0.5 (3)
D—H···AD—HH···AD···AD—H···A
C20—H20···O2ii0.952.363.314 (3)177
C17—H17···I1iii0.952.973.705 (2)135
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
C20—H20⋯O2i 0.952.363.314 (3)177
C17—H17⋯I1ii 0.952.973.705 (2)135

Symmetry codes: (i) ; (ii) .

  4 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  5-Iodo-2-phenyl-3-phenyl-sulfinyl-1-benzofuran.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-07-11

3.  2-(4-Iodo-phen-yl)-5-methyl-3-methyl-sulfinyl-1-benzofuran.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-05-10

4.  2-(4-Fluoro-phen-yl)-5-iodo-3-phenyl-sulfinyl-1-benzofuran.

Authors:  Hong Dae Choi; Pil Ja Seo; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-03-27
  4 in total
  1 in total

1.  5-Bromo-2,4,6-trimethyl-3-(3-methyl-phenyl-sulfin-yl)-1-benzo-furan.

Authors:  Hong Dae Choi; Pil Ja Seo; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-03-15
  1 in total

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