Literature DB >> 23795010

1,3-Bis(2-methyl-prop-2-eno-yl)-1H-benz-imidazol-2(3H)-one.

N Haridharan1, V Ramkumar.   

Abstract

The mol-ecules of the title compound, C15H14N2O3, possesses crystallographically imposed twofold rotational symmetry, so the asymmetric unit contains one half-mol-ecule. The fused-ring system deviates significantly from planarity; the planes of the five- and six-membered rings are twisted with respect to each other by 3.0 (1)°. In the crystal, weak C-H⋯O hydrogen bonds link mol-ecules related by translation in [010] into chains.

Entities:  

Year:  2013        PMID: 23795010      PMCID: PMC3684908          DOI: 10.1107/S1600536813011380

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For applications of substituted benzimidazoles, see: Gravatt et al. (1994 ▶); Srikanth et al. (2011 ▶). For the crystal structures of related compounds, see: Ouzidan et al. (2011 ▶); Kandri Rodi et al. (2011 ▶).

Experimental

Crystal data

C15H14N2O3 M = 270.28 Monoclinic, a = 16.6359 (9) Å b = 8.8629 (5) Å c = 9.6221 (4) Å β = 102.775 (2)° V = 1383.59 (12) Å3 Z = 4 Mo Kα radiation μ = 0.09 mm−1 T = 298 K 0.22 × 0.18 × 0.10 mm

Data collection

Bruker APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2004 ▶) T min = 0.980, T max = 0.991 4086 measured reflections 1165 independent reflections 1042 reflections with I > 2σ(I) R int = 0.014

Refinement

R[F 2 > 2σ(F 2)] = 0.057 wR(F 2) = 0.208 S = 1.16 1165 reflections 93 parameters 2 restraints H-atom parameters constrained Δρmax = 0.41 e Å−3 Δρmin = −0.36 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: SAINT-Plus (Bruker, 2004 ▶); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▶); software used to prepare material for publication: SHELXL97. Click here for additional data file. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536813011380/cv5390sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813011380/cv5390Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536813011380/cv5390Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C15H14N2O3F(000) = 568
Mr = 270.28Dx = 1.298 Mg m3
Monoclinic, C2/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -C 2ycCell parameters from 3023 reflections
a = 16.6359 (9) Åθ = 2.6–28.4°
b = 8.8629 (5) ŵ = 0.09 mm1
c = 9.6221 (4) ÅT = 298 K
β = 102.775 (2)°Prism, colourless
V = 1383.59 (12) Å30.22 × 0.18 × 0.10 mm
Z = 4
Bruker APEXII CCD area-detector diffractometer1165 independent reflections
Radiation source: fine-focus sealed tube1042 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.014
phi and ω scansθmax = 25.0°, θmin = 3.2°
Absorption correction: multi-scan (SADABS; Bruker, 2004)h = −16→19
Tmin = 0.980, Tmax = 0.991k = −10→10
4086 measured reflectionsl = −11→7
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.057Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.208H-atom parameters constrained
S = 1.16w = 1/[σ2(Fo2) + (0.1442P)2 + 0.5014P] where P = (Fo2 + 2Fc2)/3
1165 reflections(Δ/σ)max < 0.001
93 parametersΔρmax = 0.41 e Å3
2 restraintsΔρmin = −0.36 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.47013 (18)0.8707 (3)0.7898 (4)0.0750 (10)
H10.45080.96220.81670.090*
C20.43851 (17)0.7372 (3)0.8301 (3)0.0601 (8)
H20.39810.73700.88320.072*
C30.46936 (12)0.6045 (2)0.7882 (2)0.0444 (6)
C40.50000.3574 (3)0.75000.0437 (8)
C50.38571 (13)0.4045 (2)0.8743 (2)0.0461 (7)
C60.34437 (13)0.2572 (2)0.8323 (2)0.0529 (7)
N10.44820 (10)0.45224 (19)0.80638 (19)0.0430 (6)
O10.50000.2222 (2)0.75000.0654 (8)
O20.36526 (12)0.4856 (2)0.9606 (2)0.0703 (7)
C70.31257 (19)0.2319 (4)0.6791 (2)0.0781 (10)
H7A0.35770.21170.63450.117*
H7B0.28360.32010.63710.117*
H7C0.27570.14720.66550.117*
C80.3311 (2)0.1649 (4)0.9330 (3)0.0889 (11)
H8A0.29990.07790.90840.107*
H8B0.35290.18701.02840.107*
U11U22U33U12U13U23
C10.0787 (19)0.0326 (12)0.117 (3)0.0049 (10)0.0282 (17)−0.0064 (13)
C20.0603 (15)0.0416 (13)0.0812 (19)0.0069 (10)0.0217 (14)−0.0045 (11)
C30.0411 (11)0.0326 (12)0.0578 (14)0.0014 (7)0.0071 (10)0.0007 (8)
C40.0413 (15)0.0329 (14)0.0592 (19)0.0000.0162 (13)0.000
C50.0396 (11)0.0463 (13)0.0546 (14)0.0070 (8)0.0152 (10)0.0035 (9)
C60.0398 (12)0.0520 (13)0.0710 (17)−0.0020 (9)0.0208 (11)0.0046 (10)
N10.0389 (9)0.0329 (10)0.0599 (12)0.0014 (6)0.0166 (8)0.0003 (7)
O10.0647 (16)0.0316 (13)0.111 (2)0.0000.0435 (15)0.000
O20.0726 (13)0.0674 (12)0.0816 (14)0.0023 (9)0.0399 (11)−0.0090 (9)
C70.0629 (17)0.077 (2)0.089 (2)−0.0211 (13)0.0050 (16)0.0023 (15)
C80.100 (2)0.081 (2)0.095 (2)−0.0197 (18)0.0398 (19)0.0097 (17)
C1—C1i1.382 (6)C5—O21.203 (3)
C1—C21.385 (4)C5—N11.410 (3)
C1—H10.9300C5—C61.489 (3)
C2—C31.378 (3)C6—C81.3242 (19)
C2—H20.9300C6—C71.4689 (19)
C3—C3i1.383 (4)C7—H7A0.9600
C3—N11.415 (3)C7—H7B0.9600
C4—O11.198 (4)C7—H7C0.9600
C4—N11.397 (2)C8—H8A0.9300
C4—N1i1.397 (2)C8—H8B0.9300
C1i—C1—C2121.28 (17)C8—C6—C7124.0 (3)
C1i—C1—H1119.4C8—C6—C5119.0 (2)
C2—C1—H1119.4C7—C6—C5116.65 (19)
C3—C2—C1117.3 (3)C4—N1—C5125.50 (19)
C3—C2—H2121.4C4—N1—C3109.53 (17)
C1—C2—H2121.4C5—N1—C3124.95 (17)
C2—C3—C3i121.42 (15)C6—C7—H7A109.5
C2—C3—N1131.2 (2)C6—C7—H7B109.5
C3i—C3—N1107.37 (11)H7A—C7—H7B109.5
O1—C4—N1127.01 (12)C6—C7—H7C109.5
O1—C4—N1i127.01 (12)H7A—C7—H7C109.5
N1—C4—N1i106.0 (2)H7B—C7—H7C109.5
O2—C5—N1119.4 (2)C6—C8—H8A120.0
O2—C5—C6121.8 (2)C6—C8—H8B120.0
N1—C5—C6118.77 (18)H8A—C8—H8B120.0
C1i—C1—C2—C30.3 (6)N1i—C4—N1—C3−1.51 (11)
C1—C2—C3—C3i1.4 (5)O2—C5—N1—C4153.7 (2)
C1—C2—C3—N1−177.0 (2)C6—C5—N1—C4−28.9 (3)
O2—C5—C6—C8−46.6 (4)O2—C5—N1—C3−24.6 (3)
N1—C5—C6—C8136.0 (3)C6—C5—N1—C3152.8 (2)
O2—C5—C6—C7126.7 (3)C2—C3—N1—C4−177.4 (2)
N1—C5—C6—C7−50.7 (3)C3i—C3—N1—C44.0 (3)
O1—C4—N1—C50.0 (2)C2—C3—N1—C51.1 (4)
N1i—C4—N1—C5180.0 (2)C3i—C3—N1—C5−177.4 (2)
O1—C4—N1—C3178.48 (11)
D—H···AD—HH···AD···AD—H···A
C1—H1···O1ii0.932.573.193 (3)124
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
C1—H1⋯O1i 0.932.573.193 (3)124

Symmetry code: (i) .

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1.  A short history of SHELX.

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2.  DNA-directed alkylating agents. 6. Synthesis and antitumor activity of DNA minor groove-targeted aniline mustard analogues of pibenzimol (Hoechst 33258)

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3.  1,3-Bis(prop-2-yn-yl)-1H-1,3-benzimid-azol-2(3H)-one.

Authors:  Younes Ouzidan; Youssef Kandri Rodi; Jerry P Jasinski; Raymond J Butcher; James A Golen; Lahcen El Ammari
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4.  1,3-Dibenzyl-1H-benzimidazol-2(3H)-one.

Authors:  Youssef Kandri Rodi; Fouad Ouazzani Chahdi; El Mokhtar Essassi; Santiago V Luis; Michael Bolte; Lahcen El Ammari
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-11-09
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