Literature DB >> 23794966

Poly[tri-μ-aqua-di-aqua-μ-phosphono-formato-cobalt(II)sodium].

Xu-Jian Luo1, Xiu-Qing Zhang.   

Abstract

The title complex, [CoNa(CO5P)(H2O)5]n, was obtained by reacting sodium phosphono-formate with cobalt nitrate. The complex contains cobalt(II) and sodium ions, which are bridged by the O atoms of two aqua ligands. The Co(II) ion is octahedrally coordinated by three phosphonoformato ligands (one bi- and the other monodentate) and by two O atoms from the bridging aqua ligands. The sodium cation is hexa-coordinated by six O atoms from four bridging and two terminal aqua ligands. The complex mol-ecules are linked to give a three-dimensional structure by phosphono-formate ligands bridging Co(II) atoms and water mol-ecules establishing cobalt-sodium bridges. O-H⋯O hydrogen bonding between the aqua ligands and all O atoms of the phosphono-formato ligand and neighbouring aqua ligands help to consolidate the packing.

Entities:  

Year:  2013        PMID: 23794966      PMCID: PMC3684864          DOI: 10.1107/S1600536813012853

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For biological applications of organo­phospho­rus complexes, see: Xue et al. (2010 ▶); Torres Martin de Rosales et al. (2009 ▶); Galanski et al. (2003 ▶); Margiotta et al. (2007 ▶); Mesri et al. (1996 ▶).

Experimental

Crystal data

[CoNa(CO5P)(H2O)5] M = 294.98 Monoclinic, a = 8.299 (2) Å b = 11.785 (3) Å c = 9.769 (3) Å β = 106.204 (4)° V = 917.5 (4) Å3 Z = 4 Mo Kα radiation μ = 2.13 mm−1 T = 223 K 0.30 × 0.14 × 0.05 mm

Data collection

Rigaku Saturn diffractometer Absorption correction: multi-scan (REQAB; Jacobson, 1998 ▶) T min = 0.636, T max = 0.899 3715 measured reflections 1691 independent reflections 1539 reflections with I > 2σ(I) R int = 0.028

Refinement

R[F 2 > 2σ(F 2)] = 0.035 wR(F 2) = 0.066 S = 1.09 1691 reflections 168 parameters 10 restraints All H-atom parameters refined Δρmax = 0.37 e Å−3 Δρmin = −0.45 e Å−3 Data collection: CrystalClear (Rigaku, 1999 ▶); cell refinement: CrystalClear; data reduction: CrystalStructure (Rigaku/MSC & Rigaku, 2000 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Click here for additional data file. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536813012853/im2427sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813012853/im2427Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[CoNa(CO5P)(H2O)5]F(000) = 596
Mr = 294.98Dx = 2.135 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71075 Å
Hall symbol: -P 2ybcCell parameters from 3028 reflections
a = 8.299 (2) Åθ = 3.1–27.5°
b = 11.785 (3) ŵ = 2.13 mm1
c = 9.769 (3) ÅT = 223 K
β = 106.204 (4)°Block, pink
V = 917.5 (4) Å30.30 × 0.14 × 0.05 mm
Z = 4
Rigaku Saturn diffractometer1691 independent reflections
Radiation source: fine-focus sealed tube1539 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.028
Detector resolution: 14.63 pixels mm-1θmax = 25.5°, θmin = 3.1°
ω scansh = −8→10
Absorption correction: multi-scan (REQAB; Jacobson, 1998)k = −12→14
Tmin = 0.636, Tmax = 0.899l = −11→7
3715 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.035Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.066All H-atom parameters refined
S = 1.09w = 1/[σ2(Fo2) + (0.0277P)2] where P = (Fo2 + 2Fc2)/3
1691 reflections(Δ/σ)max = 0.001
168 parametersΔρmax = 0.37 e Å3
10 restraintsΔρmin = −0.45 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Co10.08112 (5)0.64526 (3)0.69444 (4)0.01133 (13)
P1−0.00606 (10)0.38705 (6)0.65570 (8)0.01079 (19)
Na10.49306 (16)0.63218 (10)0.95685 (13)0.0201 (3)
O10.1359 (3)0.47211 (16)0.6737 (2)0.0137 (5)
O20.0139 (3)0.30646 (17)0.7807 (2)0.0146 (5)
O3−0.0498 (3)0.32183 (16)0.5160 (2)0.0147 (5)
O4−0.1606 (3)0.58356 (16)0.6816 (2)0.0158 (5)
O5−0.3256 (3)0.43235 (17)0.6558 (2)0.0189 (5)
O60.1718 (3)0.62170 (19)0.9232 (2)0.0179 (5)
H6A0.139 (5)0.668 (3)0.971 (4)0.047 (14)*
H6B0.164 (4)0.5600 (16)0.960 (3)0.024 (10)*
O70.3298 (3)0.71602 (19)0.7377 (3)0.0171 (5)
H7A0.313 (6)0.777 (2)0.770 (5)0.088 (19)*
H7B0.388 (4)0.706 (3)0.683 (3)0.029 (11)*
O80.7866 (3)0.6010 (2)0.9711 (3)0.0226 (6)
H8A0.850 (4)0.636 (3)1.038 (3)0.048 (14)*
H8B0.816 (4)0.619 (3)0.901 (2)0.027 (11)*
O90.5412 (3)0.5383 (2)1.1731 (3)0.0189 (5)
H9A0.473 (3)0.540 (3)1.220 (3)0.031 (12)*
H9B0.639 (2)0.537 (3)1.221 (4)0.040 (13)*
O100.5291 (3)0.8103 (2)1.0633 (3)0.0219 (6)
H10A0.484 (7)0.866 (3)1.017 (5)0.12 (2)*
H10B0.620 (3)0.839 (3)1.104 (4)0.043 (13)*
C1−0.1872 (4)0.4775 (2)0.6624 (3)0.0133 (7)
U11U22U33U12U13U23
Co10.0135 (2)0.0099 (2)0.0113 (2)−0.00024 (18)0.00465 (17)0.00001 (17)
P10.0130 (4)0.0095 (4)0.0109 (4)0.0001 (3)0.0048 (3)0.0003 (3)
Na10.0223 (7)0.0168 (6)0.0199 (7)0.0021 (6)0.0037 (6)−0.0001 (5)
O10.0123 (11)0.0095 (10)0.0190 (12)−0.0013 (9)0.0040 (9)0.0003 (9)
O20.0205 (12)0.0125 (10)0.0101 (11)−0.0016 (9)0.0030 (9)0.0013 (9)
O30.0230 (13)0.0117 (10)0.0101 (11)−0.0018 (9)0.0055 (10)−0.0005 (9)
O40.0170 (12)0.0103 (10)0.0222 (12)−0.0006 (9)0.0090 (10)−0.0009 (9)
O50.0135 (12)0.0158 (11)0.0286 (14)−0.0032 (10)0.0078 (10)0.0000 (10)
O60.0261 (14)0.0141 (12)0.0152 (12)0.0033 (11)0.0085 (11)0.0011 (11)
O70.0197 (14)0.0171 (12)0.0173 (13)0.0003 (11)0.0096 (11)−0.0026 (10)
O80.0244 (14)0.0275 (13)0.0157 (14)−0.0062 (11)0.0054 (12)−0.0047 (12)
O90.0153 (14)0.0238 (13)0.0187 (14)0.0017 (11)0.0065 (12)0.0003 (10)
O100.0221 (15)0.0181 (12)0.0250 (15)−0.0031 (11)0.0059 (12)−0.0010 (11)
C10.0145 (17)0.0158 (16)0.0098 (17)0.0013 (14)0.0038 (14)−0.0018 (13)
Co1—O3i2.036 (2)Na1—H7A2.64 (4)
Co1—O2ii2.097 (2)O2—Co1iv2.097 (2)
Co1—O42.104 (2)O3—Co1i2.036 (2)
Co1—O12.113 (2)O4—C11.274 (3)
Co1—O72.156 (3)O5—C11.251 (4)
Co1—O62.168 (2)O6—H6A0.819 (10)
P1—O11.519 (2)O6—H6B0.820 (10)
P1—O21.519 (2)O7—H7A0.817 (10)
P1—O31.520 (2)O7—H7B0.820 (10)
P1—C11.859 (3)O8—H8A0.821 (10)
Na1—O92.319 (3)O8—H8B0.817 (10)
Na1—O102.325 (3)O9—Na1iii2.351 (3)
Na1—O9iii2.351 (3)O9—H9A0.822 (10)
Na1—O72.404 (3)O9—H9B0.818 (10)
Na1—O82.429 (3)O10—H10A0.822 (10)
Na1—O62.596 (3)O10—H10B0.818 (10)
Na1—Na1iii3.221 (2)
O3i—Co1—O2ii89.89 (8)O8—Na1—Na1iii82.90 (8)
O3i—Co1—O498.89 (9)O6—Na1—Na1iii87.00 (7)
O2ii—Co1—O486.39 (8)O9—Na1—H7A149.2 (10)
O3i—Co1—O193.29 (8)O10—Na1—H7A72.6 (5)
O2ii—Co1—O1169.80 (9)O9iii—Na1—H7A102.7 (5)
O4—Co1—O183.54 (8)O7—Na1—H7A17.9 (5)
O3i—Co1—O788.26 (9)O8—Na1—H7A120.2 (11)
O2ii—Co1—O789.84 (9)O6—Na1—H7A65.1 (11)
O4—Co1—O7171.90 (9)Na1iii—Na1—H7A141.2 (8)
O1—Co1—O799.94 (9)P1—O1—Co1117.89 (13)
O3i—Co1—O6167.17 (9)P1—O2—Co1iv134.36 (12)
O2ii—Co1—O691.74 (8)P1—O3—Co1i137.88 (13)
O4—Co1—O693.92 (9)C1—O4—Co1118.1 (2)
O1—Co1—O687.32 (8)Co1—O6—Na199.98 (10)
O7—Co1—O679.02 (9)Co1—O6—H6A116 (3)
O1—P1—O2114.36 (12)Na1—O6—H6A113 (3)
O1—P1—O3114.88 (13)Co1—O6—H6B121 (2)
O2—P1—O3110.56 (12)Na1—O6—H6B101 (2)
O1—P1—C1103.06 (13)H6A—O6—H6B105 (4)
O2—P1—C1103.76 (14)Co1—O7—Na1106.63 (11)
O3—P1—C1109.21 (12)Co1—O7—H7A99 (4)
O9—Na1—O1093.19 (10)Na1—O7—H7A98 (3)
O9—Na1—O9iii92.76 (10)Co1—O7—H7B121 (3)
O10—Na1—O9iii173.87 (11)Na1—O7—H7B103 (2)
O9—Na1—O7156.76 (11)H7A—O7—H7B125 (4)
O10—Na1—O789.86 (9)Na1—O8—H8A112 (3)
O9iii—Na1—O785.24 (9)Na1—O8—H8B116 (3)
O9—Na1—O887.73 (10)H8A—O8—H8B105 (4)
O10—Na1—O896.27 (10)Na1—O9—Na1iii87.24 (10)
O9iii—Na1—O882.52 (10)Na1—O9—H9A122 (3)
O7—Na1—O8114.84 (10)Na1iii—O9—H9A109 (3)
O9—Na1—O690.14 (9)Na1—O9—H9B115 (3)
O10—Na1—O695.69 (9)Na1iii—O9—H9B104 (3)
O9iii—Na1—O685.74 (9)H9A—O9—H9B114 (4)
O7—Na1—O666.63 (9)Na1—O10—H10A119 (4)
O8—Na1—O6167.95 (9)Na1—O10—H10B125 (3)
O9—Na1—Na1iii46.79 (7)H10A—O10—H10B99 (4)
O10—Na1—Na1iii139.96 (10)O5—C1—O4123.0 (3)
O9iii—Na1—Na1iii45.97 (7)O5—C1—P1119.6 (2)
O7—Na1—Na1iii126.93 (8)O4—C1—P1117.3 (2)
O2—P1—O1—Co1−112.78 (14)O7—Na1—O6—Co120.00 (8)
O3—P1—O1—Co1117.81 (14)O8—Na1—O6—Co1−79.7 (5)
C1—P1—O1—Co1−0.87 (16)Na1iii—Na1—O6—Co1−112.70 (8)
O3i—Co1—O1—P1−96.88 (14)O3i—Co1—O7—Na1−154.99 (11)
O2ii—Co1—O1—P111.0 (5)O2ii—Co1—O7—Na1115.12 (11)
O4—Co1—O1—P11.70 (13)O4—Co1—O7—Na152.9 (6)
O7—Co1—O1—P1174.31 (13)O1—Co1—O7—Na1−61.95 (11)
O6—Co1—O1—P195.95 (14)O6—Co1—O7—Na123.32 (10)
O1—P1—O2—Co1iv−157.24 (16)O9—Na1—O7—Co1−19.2 (3)
O3—P1—O2—Co1iv−25.7 (2)O10—Na1—O7—Co1−116.96 (11)
C1—P1—O2—Co1iv91.3 (2)O9iii—Na1—O7—Co166.71 (11)
O1—P1—O3—Co1i−43.0 (2)O8—Na1—O7—Co1146.19 (10)
O2—P1—O3—Co1i−174.31 (17)O6—Na1—O7—Co1−20.70 (9)
C1—P1—O3—Co1i72.1 (2)Na1iii—Na1—O7—Co145.96 (16)
O3i—Co1—O4—C189.9 (2)O10—Na1—O9—Na1iii−178.55 (11)
O2ii—Co1—O4—C1179.2 (2)O9iii—Na1—O9—Na1iii0.0
O1—Co1—O4—C1−2.5 (2)O7—Na1—O9—Na1iii84.4 (2)
O7—Co1—O4—C1−118.4 (6)O8—Na1—O9—Na1iii−82.39 (9)
O6—Co1—O4—C1−89.3 (2)O6—Na1—O9—Na1iii85.74 (9)
O3i—Co1—O6—Na1−13.2 (4)Co1—O4—C1—O5178.7 (2)
O2ii—Co1—O6—Na1−110.39 (9)Co1—O4—C1—P12.6 (3)
O4—Co1—O6—Na1163.11 (8)O1—P1—C1—O5−177.4 (2)
O1—Co1—O6—Na179.78 (9)O2—P1—C1—O5−57.9 (3)
O7—Co1—O6—Na1−20.89 (9)O3—P1—C1—O560.1 (3)
O9—Na1—O6—Co1−159.41 (9)O1—P1—C1—O4−1.1 (3)
O10—Na1—O6—Co1107.37 (10)O2—P1—C1—O4118.4 (2)
O9iii—Na1—O6—Co1−66.65 (10)O3—P1—C1—O4−123.7 (2)
D—H···AD—HH···AD···AD—H···A
O10—H10B···O4v0.82 (1)1.99 (1)2.805 (3)173 (4)
O10—H10A···O5ii0.82 (1)1.99 (3)2.736 (3)151 (5)
O9—H9B···O1iii0.82 (1)1.87 (1)2.683 (3)178 (4)
O9—H9A···O5vi0.82 (1)1.98 (1)2.790 (4)171 (4)
O8—H8B···O4vii0.82 (1)2.24 (2)2.988 (4)152 (3)
O8—H8A···O2iii0.82 (1)1.94 (1)2.751 (3)168 (4)
O7—H7B···O10viii0.82 (1)1.88 (1)2.703 (4)177 (4)
O7—H7A···O5ii0.82 (1)1.96 (2)2.757 (3)166 (5)
O6—H6B···O8iii0.82 (1)2.02 (2)2.806 (3)161 (4)
O6—H6A···O3ii0.82 (1)1.97 (2)2.698 (3)148 (4)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O10—H10B⋯O4i 0.82 (1)1.99 (1)2.805 (3)173 (4)
O10—H10A⋯O5ii 0.82 (1)1.99 (3)2.736 (3)151 (5)
O9—H9B⋯O1iii 0.82 (1)1.87 (1)2.683 (3)178 (4)
O9—H9A⋯O5iv 0.82 (1)1.98 (1)2.790 (4)171 (4)
O8—H8B⋯O4v 0.82 (1)2.24 (2)2.988 (4)152 (3)
O8—H8A⋯O2iii 0.82 (1)1.94 (1)2.751 (3)168 (4)
O7—H7B⋯O10vi 0.82 (1)1.88 (1)2.703 (4)177 (4)
O7—H7A⋯O5ii 0.82 (1)1.96 (2)2.757 (3)166 (5)
O6—H6B⋯O8iii 0.82 (1)2.02 (2)2.806 (3)161 (4)
O6—H6A⋯O3ii 0.82 (1)1.97 (2)2.698 (3)148 (4)

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) .

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