Literature DB >> 23793515

The adaptive variant EDARV370A is associated with straight hair in East Asians.

Jingze Tan1, Yajun Yang, Kun Tang, Pardis C Sabeti, Li Jin, Sijia Wang.   

Abstract

Hair straightness/curliness is a highly heritable trait amongst human populations. Previous studies have reported European specific genetic variants influencing hair straightness, but those in East Asians remain unknown. One promising candidate is a derived coding variant of the ectodysplasin A receptor (EDAR), EDARV370A (370A), associated with several phenotypic changes of epidermal appendages. One of the strongest signals of natural selection in human genomes, 370A, has risen to high prevalence in East Asian and Native American populations, whilst being almost absent in Europeans and Africans. This striking frequency distribution and the pleiotropic nature of 370A led us to pursue if hair straightness, another epidermal appendage-related phenotype, is affected by this variant. By studying 1,718 individuals from four distinctive East Asian populations (Han, Tibetan, Mongolian, and Li), we found a significant association between 370A and the straight hair type in the Han (p = 2.90 × 10(-6)), Tibetan (p = 3.07 × 10(-2)), and Mongolian (p = 1.03 × 10(-5)) populations. Combining all the samples, the association is even stronger (p = 5.18 × 10(-10)). The effect of 370A on hair straightness is additive, with an odds ratio of 2.05. The results indicate very different biological mechanisms of straight hair in Europe and Asia, and also present a more comprehensive picture of the phenotypic consequences of 370A, providing important clues into the potential adaptive forces shaping the evolution of this extraordinary genetic variant.

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Year:  2013        PMID: 23793515     DOI: 10.1007/s00439-013-1324-1

Source DB:  PubMed          Journal:  Hum Genet        ISSN: 0340-6717            Impact factor:   4.132


  14 in total

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Journal:  J Hum Genet       Date:  2012-05-31       Impact factor: 3.172

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Journal:  Am J Hum Genet       Date:  2007-07-25       Impact factor: 11.025

3.  A composite of multiple signals distinguishes causal variants in regions of positive selection.

Authors:  Sharon R Grossman; Ilya Shlyakhter; Ilya Shylakhter; Elinor K Karlsson; Elizabeth H Byrne; Shannon Morales; Gabriel Frieden; Elizabeth Hostetter; Elaine Angelino; Manuel Garber; Or Zuk; Eric S Lander; Stephen F Schaffner; Pardis C Sabeti
Journal:  Science       Date:  2010-01-07       Impact factor: 47.728

4.  Estimating the heritability of hair curliness in twins of European ancestry.

Authors:  Sarah E Medland; Gu Zhu; Nicholas G Martin
Journal:  Twin Res Hum Genet       Date:  2009-10       Impact factor: 1.587

5.  Modeling recent human evolution in mice by expression of a selected EDAR variant.

Authors:  Yana G Kamberov; Sijia Wang; Jingze Tan; Pascale Gerbault; Abigail Wark; Longzhi Tan; Yajun Yang; Shilin Li; Kun Tang; Hua Chen; Adam Powell; Yuval Itan; Dorian Fuller; Jason Lohmueller; Junhao Mao; Asa Schachar; Madeline Paymer; Elizabeth Hostetter; Elizabeth Byrne; Melissa Burnett; Andrew P McMahon; Mark G Thomas; Daniel E Lieberman; Li Jin; Clifford J Tabin; Bruce A Morgan; Pardis C Sabeti
Journal:  Cell       Date:  2013-02-14       Impact factor: 41.582

6.  A scan for genetic determinants of human hair morphology: EDAR is associated with Asian hair thickness.

Authors:  Akihiro Fujimoto; Ryosuke Kimura; Jun Ohashi; Kazuya Omi; Rika Yuliwulandari; Lilian Batubara; Mohammad Syamsul Mustofa; Urai Samakkarn; Wannapa Settheetham-Ishida; Takafumi Ishida; Yasuyuki Morishita; Takuro Furusawa; Minato Nakazawa; Ryutaro Ohtsuka; Katsushi Tokunaga
Journal:  Hum Mol Genet       Date:  2007-12-08       Impact factor: 6.150

7.  Common variants in the trichohyalin gene are associated with straight hair in Europeans.

Authors:  Sarah E Medland; Dale R Nyholt; Jodie N Painter; Brian P McEvoy; Allan F McRae; Gu Zhu; Scott D Gordon; Manuel A R Ferreira; Margaret J Wright; Anjali K Henders; Megan J Campbell; David L Duffy; Narelle K Hansell; Stuart Macgregor; Wendy S Slutske; Andrew C Heath; Grant W Montgomery; Nicholas G Martin
Journal:  Am J Hum Genet       Date:  2009-11-05       Impact factor: 11.025

8.  A common variation in EDAR is a genetic determinant of shovel-shaped incisors.

Authors:  Ryosuke Kimura; Tetsutaro Yamaguchi; Mayako Takeda; Osamu Kondo; Takashi Toma; Kuniaki Haneji; Tsunehiko Hanihara; Hirotaka Matsukusa; Shoji Kawamura; Koutaro Maki; Motoki Osawa; Hajime Ishida; Hiroki Oota
Journal:  Am J Hum Genet       Date:  2009-10       Impact factor: 11.025

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Authors:  Shie Hong Chang; Stephanie Jobling; Keith Brennan; Denis J Headon
Journal:  PLoS One       Date:  2009-10-26       Impact factor: 3.240

10.  Positive selection in East Asians for an EDAR allele that enhances NF-kappaB activation.

Authors:  Jarosław Bryk; Emilie Hardouin; Irina Pugach; David Hughes; Rainer Strotmann; Mark Stoneking; Sean Myles
Journal:  PLoS One       Date:  2008-05-21       Impact factor: 3.240

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  28 in total

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Journal:  Hum Genet       Date:  2019-04-25       Impact factor: 4.132

2.  Genome-wide scans reveal variants at EDAR predominantly affecting hair straightness in Han Chinese and Uyghur populations.

Authors:  Sijie Wu; Jingze Tan; Yajun Yang; Qianqian Peng; Manfei Zhang; Jinxi Li; Dongsheng Lu; Yu Liu; Haiyi Lou; Qidi Feng; Yan Lu; Yaqun Guan; Zhaoxia Zhang; Yi Jiao; Pardis Sabeti; Jean Krutmann; Kun Tang; Li Jin; Shuhua Xu; Sijia Wang
Journal:  Hum Genet       Date:  2016-08-03       Impact factor: 4.132

3.  Genetic variants underlying differences in facial morphology in East Asian and European populations.

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4.  Genomic diversity and post-admixture adaptation in the Uyghurs.

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5.  EDARV370A associated facial characteristics in Uyghur population revealing further pleiotropic effects.

Authors:  Qianqian Peng; Jinxi Li; Jingze Tan; Yajun Yang; Manfei Zhang; Sijie Wu; Yu Liu; Juan Zhang; Pengfei Qin; Yaqun Guan; Yi Jiao; Zhaoxia Zhang; Pardis C Sabeti; Kun Tang; Shuhua Xu; Li Jin; Sijia Wang
Journal:  Hum Genet       Date:  2015-11-24       Impact factor: 4.132

6.  Fish is Fish: the use of experimental model species to reveal causes of skeletal diversity in evolution and disease.

Authors:  M P Harris; K Henke; M B Hawkins; P E Witten
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7.  Whole genome sequencing of an ethnic Pathan (Pakhtun) from the north-west of Pakistan.

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Journal:  BMC Genomics       Date:  2015-03-12       Impact factor: 3.969

8.  A genome-wide association study identifies multiple loci for variation in human ear morphology.

Authors:  Kaustubh Adhikari; Guillermo Reales; Andrew J P Smith; Esra Konka; Jutta Palmen; Mirsha Quinto-Sanchez; Victor Acuña-Alonzo; Claudia Jaramillo; William Arias; Macarena Fuentes; María Pizarro; Rodrigo Barquera Lozano; Gastón Macín Pérez; Jorge Gómez-Valdés; Hugo Villamil-Ramírez; Tábita Hunemeier; Virginia Ramallo; Caio C Silva de Cerqueira; Malena Hurtado; Valeria Villegas; Vanessa Granja; Carla Gallo; Giovanni Poletti; Lavinia Schuler-Faccini; Francisco M Salzano; Maria-Cátira Bortolini; Samuel Canizales-Quinteros; Francisco Rothhammer; Gabriel Bedoya; Rosario Calderón; Javier Rosique; Michael Cheeseman; Mahmood F Bhutta; Steve E Humphries; Rolando Gonzalez-José; Denis Headon; David Balding; Andrés Ruiz-Linares
Journal:  Nat Commun       Date:  2015-06-24       Impact factor: 14.919

9.  Admixture in Latin America: geographic structure, phenotypic diversity and self-perception of ancestry based on 7,342 individuals.

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Journal:  PLoS Genet       Date:  2014-09-25       Impact factor: 5.917

10.  Private haplotypes can reveal local adaptation.

Authors:  Agnès E Sjöstrand; Per Sjödin; Mattias Jakobsson
Journal:  BMC Genet       Date:  2014-05-22       Impact factor: 2.797

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