Literature DB >> 29744812

Analytical Scheme Leading to Integrated High-Sensitivity Profiling of Glycosphingolipids Together with N- and O-Glycans from One Sample.

John D Benktander1, Solomon T Gizaw1, Stefan Gaunitz1, Milos V Novotny2.   

Abstract

Glycoconjugates are directly or indirectly involved in many biological processes. Due to their complex structures, the structural elucidation of glycans and the exploration of their role in biological systems have been challenging. Glycan pools generated through release from glycoprotein or glycolipid mixtures can often be very complex. For the sake of procedural simplicity, many glycan profiling studies choose to concentrate on a single class of glycoconjugates. In this paper, we demonstrate it feasible to cover glycosphingolipids, N-glycans, and O-glycans isolated from the same sample. Small volumes of human blood serum and ascites fluid as well as small mouse brain tissue samples are sufficient to profile sequentially glycans from all three classes of glycoconjugates and even positively identify some mixture components through MALDI-MS and LC-ESI-MS. The results show that comprehensive glycan profiles can be obtained from the equivalent of 500-μg protein starting material or possibly less. These methodological improvements can help accelerating future glycomic comprehensive studies, especially for precious clinical samples. Graphical Abstract Outline of glycan profiling procedures.

Entities:  

Keywords:  Glycosphingolipid (GSL) glycans; Integrated glycomic scheme; N- and O-glycans

Year:  2018        PMID: 29744812      PMCID: PMC6226365          DOI: 10.1007/s13361-018-1933-y

Source DB:  PubMed          Journal:  J Am Soc Mass Spectrom        ISSN: 1044-0305            Impact factor:   3.109


  52 in total

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2.  Developmental changes in the expression of glycogenes and the content of N-glycans in the mouse cerebral cortex.

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Journal:  Nat Immunol       Date:  2016-10-19       Impact factor: 25.606

4.  Proteomics Analysis of O-GalNAc Glycosylation in Human Serum by an Integrated Strategy.

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Journal:  Anal Chem       Date:  2017-01-11       Impact factor: 6.986

5.  Effect of ganglioside GM3 synthase gene knockout on the glycoprotein N-glycan profile of mouse embryonic fibroblast.

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Review 6.  Surface marker antigens in the characterization of human embryonic stem cells.

Authors:  Andrew J Wright; Peter W Andrews
Journal:  Stem Cell Res       Date:  2009-04-08       Impact factor: 2.020

7.  Linkage-Specific in Situ Sialic Acid Derivatization for N-Glycan Mass Spectrometry Imaging of Formalin-Fixed Paraffin-Embedded Tissues.

Authors:  Stephanie Holst; Bram Heijs; Noortje de Haan; René J M van Zeijl; Inge H Briaire-de Bruijn; Gabi W van Pelt; Anand S Mehta; Peggy M Angel; Wilma E Mesker; Rob A Tollenaar; Richard R Drake; Judith V M G Bovée; Liam A McDonnell; Manfred Wuhrer
Journal:  Anal Chem       Date:  2016-05-23       Impact factor: 6.986

8.  Isolation and characterization of ceramide glycanase from the leech, Macrobdella decora.

Authors:  B Zhou; S C Li; R A Laine; R T Huang; Y T Li
Journal:  J Biol Chem       Date:  1989-07-25       Impact factor: 5.157

9.  Detailed glycan structural characterization by electronic excitation dissociation.

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Journal:  Anal Chem       Date:  2013-10-09       Impact factor: 6.986

Review 10.  Glycosylation diseases: quo vadis?

Authors:  Harry Schachter; Hudson H Freeze
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  1 in total

1.  Mammalian brain glycoproteins exhibit diminished glycan complexity compared to other tissues.

Authors:  Sarah E Williams; Maxence Noel; Sylvain Lehoux; Murat Cetinbas; Ramnik J Xavier; Ruslan I Sadreyev; Edward M Scolnick; Jordan W Smoller; Richard D Cummings; Robert G Mealer
Journal:  Nat Commun       Date:  2022-01-12       Impact factor: 17.694

  1 in total

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