Literature DB >> 23786373

Mutation of lysine 317 in the D2 subunit of photosystem II alters chloride binding and proton transport.

Ravi Pokhrel1, Rachel J Service, Richard J Debus, Gary W Brudvig.   

Abstract

The role of chloride in photosystem II (PSII) is unclear. Using structural information from PSII and a careful comparison with other chloride-activated enzymes, we proposed a role for chloride at the D2-K317 site in PSII [Pokhrel, R., et al. (2011) Biochemistry 50, 2725-2734]. To probe the role of chloride at this site, the D2-K317R, D2-K317A, D2-K317Q, and D2-K317E mutations were created in the cyanobacterium Synechocystis sp. PCC 6803. Purified PSII from the mutants was probed with Fourier transform infrared difference spectroscopy, demonstrating that compared to PSII from wild-type Synechocystis, PSII from all four mutants exhibit changes in the conformations of the polypeptide backbone and carboxylate groups. However, D2-K317R PSII exhibits minor changes, whereas D2-K317A, D2-K317Q, and D2-K317E PSII exhibit more substantial changes in polypeptide conformations. Steady-state oxygen-evolution measurements of purified PSII core complexes show that the oxygen-evolution activity of D2-K317A is independent of chloride. This is consistent with the loss of the chloride requirement when the charged K residue is replaced with an uncharged residue that no longer binds to an essential carboxylate (D1-D61) in the absence of chloride, analogous to observations in other chloride-activated enzymes. In contrast, the oxygen-evolution activity of D2-K317R is sensitive to the chloride concentration in the assay buffer; the effective KD for chloride binding is higher in D2-K317R than in wild-type PSII, possibly because of a less optimal binding site in the mutant. The S2 states of wild-type, D2-K317A, and D2-K317R PSII were probed using electron paramagnetic resonance spectroscopy. A g = 2 multiline signal, similar to the wild-type signal, was observed for D2-K317A and D2-K317R. However, a g = 4 signal was also observed for D2-K317R. Measurements of flash-dependent O2 yields showed that D2-K317A and D2-K317R have a higher miss factor than wild-type PSII. The oxygen-release kinetics of D2-K317A and D2-K317R were slower than those of the wild type, in the following order: D2-K317A < D2-K317R < wild type. These results collectively suggest that proton transfer is inefficient in D2-K317A and D2-K317R, thereby giving rise to a higher miss factor and slower oxygen-release kinetics.

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Year:  2013        PMID: 23786373     DOI: 10.1021/bi301700u

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  12 in total

1.  Identifying carboxylate ligand vibrational modes in photosystem II with QM/MM methods.

Authors:  Richard J Debus
Journal:  Proc Natl Acad Sci U S A       Date:  2016-10-28       Impact factor: 11.205

2.  D1-Asn-298 in photosystem II is involved in a hydrogen-bond network near the redox-active tyrosine YZ for proton exit during water oxidation.

Authors:  Ryo Nagao; Hanayo Ueoka-Nakanishi; Takumi Noguchi
Journal:  J Biol Chem       Date:  2017-10-18       Impact factor: 5.157

3.  Quantum mechanics/molecular mechanics simulation of the ligand vibrations of the water-oxidizing Mn4CaO5 cluster in photosystem II.

Authors:  Shin Nakamura; Takumi Noguchi
Journal:  Proc Natl Acad Sci U S A       Date:  2016-10-11       Impact factor: 11.205

Review 4.  Binding and functions of the two chloride ions in the oxygen-evolving center of photosystem II.

Authors:  Ko Imaizumi; Kentaro Ifuku
Journal:  Photosynth Res       Date:  2022-06-13       Impact factor: 3.429

5.  Effects of mutations of D1-R323, D1-N322, D1-D319, D1-H304 on the functioning of photosystem II in Thermosynechococcus vulcanus.

Authors:  Qingjun Zhu; Yanyan Yang; Yanan Xiao; Wenhui Han; Xingyue Li; Wenda Wang; Tingyun Kuang; Jian-Ren Shen; Guangye Han
Journal:  Photosynth Res       Date:  2022-05-03       Impact factor: 3.429

6.  Substitution of the D1-Asn87 site in photosystem II of cyanobacteria mimics the chloride-binding characteristics of spinach photosystem II.

Authors:  Gourab Banerjee; Ipsita Ghosh; Christopher J Kim; Richard J Debus; Gary W Brudvig
Journal:  J Biol Chem       Date:  2017-12-20       Impact factor: 5.157

7.  Functional roles of D2-Lys317 and the interacting chloride ion in the water oxidation reaction of photosystem II as revealed by fourier transform infrared analysis.

Authors:  Hiroyuki Suzuki; Jianfeng Yu; Takashi Kobayashi; Hanayo Nakanishi; Peter J Nixon; Takumi Noguchi
Journal:  Biochemistry       Date:  2013-07-01       Impact factor: 3.162

Review 8.  Structural Coupling of Extrinsic Proteins with the Oxygen-Evolving Center in Photosystem II.

Authors:  Kentaro Ifuku; Takumi Noguchi
Journal:  Front Plant Sci       Date:  2016-02-05       Impact factor: 5.753

9.  Unveiling Chloroplast RNA Editing Events Using Next Generation Small RNA Sequencing Data.

Authors:  Nureyev F Rodrigues; Ana P Christoff; Guilherme C da Fonseca; Franceli R Kulcheski; Rogerio Margis
Journal:  Front Plant Sci       Date:  2017-09-29       Impact factor: 5.753

10.  Acquirement of water-splitting ability and alteration of the charge-separation mechanism in photosynthetic reaction centers.

Authors:  Hiroyuki Tamura; Keisuke Saito; Hiroshi Ishikita
Journal:  Proc Natl Acad Sci U S A       Date:  2020-06-29       Impact factor: 11.205

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