Literature DB >> 27794121

Identifying carboxylate ligand vibrational modes in photosystem II with QM/MM methods.

Richard J Debus1.   

Abstract

Entities:  

Year:  2016        PMID： 27794121      PMCID： PMC5111707          DOI： 10.1073/pnas.1615794113

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN： 0027-8424            Impact factor:   11.205


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  19 in total

1.  Crystal structure of oxygen-evolving photosystem II at a resolution of 1.9 Å.

Authors:  Yasufumi Umena; Keisuke Kawakami; Jian-Ren Shen; Nobuo Kamiya
Journal:  Nature       Date:  2011-04-17       Impact factor: 49.962

Review 2.  Reflections on substrate water and dioxygen formation.

Authors:  Nicholas Cox; Johannes Messinger
Journal:  Biochim Biophys Acta       Date:  2013-02-01

Review 3.  Oxygen-evolving complex of Photosystem II: an analysis of second-shell residues and hydrogen-bonding networks.

Authors:  Leslie Vogt; David J Vinyard; Sahr Khan; Gary W Brudvig
Journal:  Curr Opin Chem Biol       Date:  2015-01-24       Impact factor: 8.822

4.  Role of a Water Network around the Mn4CaO5 Cluster in Photosynthetic Water Oxidation: A Fourier Transform Infrared Spectroscopy and Quantum Mechanics/Molecular Mechanics Calculation Study.

Authors:  Shin Nakamura; Kai Ota; Yuichi Shibuya; Takumi Noguchi
Journal:  Biochemistry       Date:  2016-01-12       Impact factor: 3.162

5.  Drastic changes in the ligand structure of the oxygen-evolving Mn cluster upon Ca2+ depletion as revealed by FTIR difference spectroscopy.

Authors:  Yuta Taguchi; Takumi Noguchi
Journal:  Biochim Biophys Acta       Date:  2006-11-07

6.  No evidence from FTIR difference spectroscopy that aspartate-170 of the D1 polypeptide ligates a manganese ion that undergoes oxidation during the S0 to S1, S1 to S2, or S2 to S3 transitions in photosystem II.

Authors:  Richard J Debus; Melodie A Strickler; Lee M Walker; Warwick Hillier
Journal:  Biochemistry       Date:  2005-02-08       Impact factor: 3.162

7.  Native structure of photosystem II at 1.95 Å resolution viewed by femtosecond X-ray pulses.

Authors:  Michihiro Suga; Fusamichi Akita; Kunio Hirata; Go Ueno; Hironori Murakami; Yoshiki Nakajima; Tetsuya Shimizu; Keitaro Yamashita; Masaki Yamamoto; Hideo Ago; Jian-Ren Shen
Journal:  Nature       Date:  2014-11-26       Impact factor: 49.962

8.  Quantum mechanics/molecular mechanics simulation of the ligand vibrations of the water-oxidizing Mn4CaO5 cluster in photosystem II.

Authors:  Shin Nakamura; Takumi Noguchi
Journal:  Proc Natl Acad Sci U S A       Date:  2016-10-11       Impact factor: 11.205

9.  No evidence from FTIR difference spectroscopy that glutamate-189 of the D1 polypeptide ligates a Mn ion that undergoes oxidation during the S0 to S1, S1 to S2, or S2 to S3 transitions in photosystem II.

Authors:  Melodie A Strickler; Warwick Hillier; Richard J Debus
Journal:  Biochemistry       Date:  2006-07-25       Impact factor: 3.162

Review 10.  Mn4Ca cluster in photosynthesis: where and how water is oxidized to dioxygen.

Authors:  Junko Yano; Vittal Yachandra
Journal:  Chem Rev       Date:  2014-03-31       Impact factor: 60.622
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