Literature DB >> 23775845

EPR relaxation-enhancement-based distance measurements on orthogonally spin-labeled T4-lysozyme.

Sahand Razzaghi1, Evan K Brooks, Enrica Bordignon, Wayne L Hubbell, Maxim Yulikov, Gunnar Jeschke.   

Abstract

Lanthanide-induced enhancement of the longitudinal relaxation of nitroxide radicals in combination with orthogonal site-directed spin labeling is presented as a systematic distance measurement method intended for studies of bio-macromolecules and bio-macromolecular complexes. The approach is tested on a water-soluble protein (T4-lysozyme) for two different commercially available lanthanide labels, and complemented by previously reported data on a membrane-inserted polypeptide. Single temperature measurements are shown to be sufficient for reliable distance determination, with an upper measurable distance limit of about 5-6 nm. The extracted averaged distances represent the closest approach in Ln(III) -nitroxide distance distributions. Studies of conformational changes and of bio-macromolecule association-dissociation are proposed as possible application area of the relaxation-enhancement-based distance measurements.
Copyright © 2013 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  EPR; lanthanides; nanometer-range distances; nitroxide radicals; proteins

Mesh:

Substances:

Year:  2013        PMID: 23775845      PMCID: PMC3804414          DOI: 10.1002/cbic.201300165

Source DB:  PubMed          Journal:  Chembiochem        ISSN: 1439-4227            Impact factor:   3.164


  51 in total

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Journal:  Nat Struct Biol       Date:  2000-09

Review 3.  Localized surface plasmon resonance spectroscopy and sensing.

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4.  Relaxation-based distance measurements between a nitroxide and a lanthanide spin label.

Authors:  H Jäger; A Koch; V Maus; H W Spiess; G Jeschke
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6.  Paramagnetically induced residual dipolar couplings for solution structure determination of lanthanide binding proteins.

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7.  Multiple Pathway Relaxation Enhancement in the System Composed of Three Paramagnetic Species: Nitroxide Radical-Ln(3+)-O2.

Authors:  Petra Lueders; Heidrun Jäger; Marcus A Hemminga; Gunnar Jeschke; Maxim Yulikov
Journal:  J Phys Chem Lett       Date:  2012-05-04       Impact factor: 6.475

8.  Impact of electron-electron spin interaction on electron spin relaxation of nitroxide diradicals and tetraradical in glassy solvents between 10 and 300 k.

Authors:  Hideo Sato; Velavan Kathirvelu; Gaëlle Spagnol; Suchada Rajca; Andrzej Rajca; Sandra S Eaton; Gareth R Eaton
Journal:  J Phys Chem B       Date:  2008-02-20       Impact factor: 2.991

9.  PELDOR measurements on a nitroxide-labeled Cu(II) porphyrin: orientation selection, spin-density distribution, and conformational flexibility.

Authors:  Bela E Bode; Jörn Plackmeyer; Thomas F Prisner; Olav Schiemann
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Review 10.  Long-range distance determinations in biomacromolecules by EPR spectroscopy.

Authors:  Olav Schiemann; Thomas F Prisner
Journal:  Q Rev Biophys       Date:  2007-06-13       Impact factor: 5.318

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  3 in total

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Journal:  J Phys Chem B       Date:  2015-06-04       Impact factor: 2.991

2.  Triarylmethyl Radicals: EPR Study of 13C Hyperfine Coupling Constants.

Authors:  Andrey A Kuzhelev; Victor M Tormyshev; Olga Yu Rogozhnikova; Dmitry V Trukhin; Tatiana I Troitskaya; Rodion K Strizhakov; Olesya A Krumkacheva; Matvey V Fedin; Elena G Bagryanskaya
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3.  Long-range distance measurements in proteins at physiological temperatures using saturation recovery EPR spectroscopy.

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