Literature DB >> 23775118

Sites of acetylation on newly synthesized histone H4 are required for chromatin assembly and DNA damage response signaling.

Zhongqi Ge1, Devi Nair, Xiaoyan Guan, Neha Rastogi, Michael A Freitas, Mark R Parthun.   

Abstract

The best-characterized acetylation of newly synthesized histone H4 is the diacetylation of the NH2-terminal tail on lysines 5 and 12. Despite its evolutionary conservation, this pattern of modification has not been shown to be essential for either viability or chromatin assembly in any model organism. We demonstrate that mutations in histone H4 lysines 5 and 12 in yeast confer hypersensitivity to replication stress and DNA-damaging agents when combined with mutations in histone H4 lysine 91, which has also been found to be a site of acetylation on soluble histone H4. In addition, these mutations confer a dramatic decrease in cell viability when combined with mutations in histone H3 lysine 56. We also show that mutation of the sites of acetylation on newly synthesized histone H4 results in defects in the reassembly of chromatin structure that accompanies the repair of HO-mediated double-strand breaks. This defect is not due to a decrease in the level of histone H3 lysine 56 acetylation. Intriguingly, mutations that alter the sites of newly synthesized histone H4 acetylation display a marked decrease in levels of phosphorylated H2A (γ-H2AX) in chromatin surrounding the double-strand break. These results indicate that the sites of acetylation on newly synthesized histones H3 and H4 can function in nonoverlapping ways that are required for chromatin assembly, viability, and DNA damage response signaling.

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Year:  2013        PMID: 23775118      PMCID: PMC3753916          DOI: 10.1128/MCB.00460-13

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  76 in total

1.  A phosphatase complex that dephosphorylates gammaH2AX regulates DNA damage checkpoint recovery.

Authors:  Michael-Christopher Keogh; Jung-Ae Kim; Michael Downey; Jeffrey Fillingham; Dipanjan Chowdhury; Jacob C Harrison; Megumi Onishi; Nira Datta; Sarah Galicia; Andrew Emili; Judy Lieberman; Xuetong Shen; Stephen Buratowski; James E Haber; Daniel Durocher; Jack F Greenblatt; Nevan J Krogan
Journal:  Nature       Date:  2005-11-20       Impact factor: 49.962

2.  A role for cell-cycle-regulated histone H3 lysine 56 acetylation in the DNA damage response.

Authors:  Hiroshi Masumoto; David Hawke; Ryuji Kobayashi; Alain Verreault
Journal:  Nature       Date:  2005-07-14       Impact factor: 49.962

3.  Histone chaperone Asf1 is required for histone H3 lysine 56 acetylation, a modification associated with S phase in mitosis and meiosis.

Authors:  J Recht; T Tsubota; J C Tanny; R L Diaz; J M Berger; X Zhang; B A Garcia; J Shabanowitz; A L Burlingame; D F Hunt; P D Kaufman; C D Allis
Journal:  Proc Natl Acad Sci U S A       Date:  2006-04-20       Impact factor: 11.205

4.  The sirtuins hst3 and Hst4p preserve genome integrity by controlling histone h3 lysine 56 deacetylation.

Authors:  Ivana Celic; Hiroshi Masumoto; Wendell P Griffith; Pamela Meluh; Robert J Cotter; Jef D Boeke; Alain Verreault
Journal:  Curr Biol       Date:  2006-07-11       Impact factor: 10.834

5.  Crystal structure of the nucleosome core particle at 2.8 A resolution.

Authors:  K Luger; A W Mäder; R K Richmond; D F Sargent; T J Richmond
Journal:  Nature       Date:  1997-09-18       Impact factor: 49.962

6.  Type B histone acetyltransferase Hat1p participates in telomeric silencing.

Authors:  T J Kelly; S Qin; D E Gottschling; M R Parthun
Journal:  Mol Cell Biol       Date:  2000-10       Impact factor: 4.272

7.  In vivo roles of Rad52, Rad54, and Rad55 proteins in Rad51-mediated recombination.

Authors:  Neal Sugawara; Xuan Wang; James E Haber
Journal:  Mol Cell       Date:  2003-07       Impact factor: 17.970

8.  Acetylation of lysine 56 of histone H3 catalyzed by RTT109 and regulated by ASF1 is required for replisome integrity.

Authors:  Junhong Han; Hui Zhou; Zhizhong Li; Rui-Ming Xu; Zhiguo Zhang
Journal:  J Biol Chem       Date:  2007-08-09       Impact factor: 5.157

9.  RSC functions as an early double-strand-break sensor in the cell's response to DNA damage.

Authors:  Bing Liang; Jiajing Qiu; Kajan Ratnakumar; Brehon C Laurent
Journal:  Curr Biol       Date:  2007-08-09       Impact factor: 10.834

10.  Histone H3 N-terminal mutations allow hyperactivation of the yeast GAL1 gene in vivo.

Authors:  R K Mann; M Grunstein
Journal:  EMBO J       Date:  1992-09       Impact factor: 11.598

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  14 in total

1.  Histone acetyltransferase 1 is required for DNA replication fork function and stability.

Authors:  Paula A Agudelo Garcia; Callie M Lovejoy; Prabakaran Nagarajan; Dongju Park; Liudmila V Popova; Michael A Freitas; Mark R Parthun
Journal:  J Biol Chem       Date:  2020-05-04       Impact factor: 5.157

2.  Regulation of the histone deacetylase Hst3 by cyclin-dependent kinases and the ubiquitin ligase SCFCdc4.

Authors:  Neda Delgoshaie; Xiaojing Tang; Evgeny D Kanshin; Elizabeth C Williams; Adam D Rudner; Pierre Thibault; Mike Tyers; Alain Verreault
Journal:  J Biol Chem       Date:  2014-03-19       Impact factor: 5.157

3.  Histone hypoacetylation-activated genes are repressed by acetyl-CoA- and chromatin-mediated mechanism.

Authors:  Swati Mehrotra; Luciano Galdieri; Tiantian Zhang; Man Zhang; Lucy F Pemberton; Ales Vancura
Journal:  Biochim Biophys Acta       Date:  2014-06-05

Review 4.  Histone variants: The unsung guardians of the genome.

Authors:  Ernest O N Phillips; Akash Gunjan
Journal:  DNA Repair (Amst)       Date:  2022-02-17

5.  Identification of multiple roles for histone acetyltransferase 1 in replication-coupled chromatin assembly.

Authors:  Paula A Agudelo Garcia; Michael E Hoover; Pei Zhang; Prabakaran Nagarajan; Michael A Freitas; Mark R Parthun
Journal:  Nucleic Acids Res       Date:  2017-09-19       Impact factor: 16.971

6.  Rpb9-deficient cells are defective in DNA damage response and require histone H3 acetylation for survival.

Authors:  Henel Sein; Kristina Reinmets; Kadri Peil; Kersti Kristjuhan; Signe Värv; Arnold Kristjuhan
Journal:  Sci Rep       Date:  2018-02-13       Impact factor: 4.379

Review 7.  The Role of Histone Protein Modifications and Mutations in Histone Modifiers in Pediatric B-Cell Progenitor Acute Lymphoblastic Leukemia.

Authors:  Szymon Janczar; Karolina Janczar; Agata Pastorczak; Hani Harb; Adam J W Paige; Beata Zalewska-Szewczyk; Marian Danilewicz; Wojciech Mlynarski
Journal:  Cancers (Basel)       Date:  2017-01-03       Impact factor: 6.639

Review 8.  Mechanistic insights into histone deposition and nucleosome assembly by the chromatin assembly factor-1.

Authors:  Paul V Sauer; Yajie Gu; Wallace H Liu; Francesca Mattiroli; Daniel Panne; Karolin Luger; Mair Ea Churchill
Journal:  Nucleic Acids Res       Date:  2018-11-02       Impact factor: 16.971

9.  Early-onset aging and mitochondrial defects associated with loss of histone acetyltransferase 1 (Hat1).

Authors:  Prabakaran Nagarajan; Paula A Agudelo Garcia; Chitra C Iyer; Liudmila V Popova; William D Arnold; Mark R Parthun
Journal:  Aging Cell       Date:  2019-07-10       Impact factor: 9.304

10.  PP32 and SET/TAF-Iβ proteins regulate the acetylation of newly synthesized histone H4.

Authors:  Francisco Saavedra; Carlos Rivera; Elizabeth Rivas; Paola Merino; Daniel Garrido; Sergio Hernández; Ignasi Forné; Isabelle Vassias; Zachary A Gurard-Levin; Iván E Alfaro; Axel Imhof; Geneviève Almouzni; Alejandra Loyola
Journal:  Nucleic Acids Res       Date:  2017-11-16       Impact factor: 16.971

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