Literature DB >> 23773802

Ion selectivity and gating mechanisms of FNT channels.

Andrew B Waight1, Bryan K Czyzewski, Da-Neng Wang.   

Abstract

The phospholipid bilayer has evolved to be a protective and selective barrier by which the cell maintains high concentrations of life sustaining organic and inorganic material. As gatekeepers responsible for an immense amount of bidirectional chemical traffic between the cytoplasm and extracellular milieu, ion channels have been studied in detail since their postulated existence nearly three-quarters of a century ago. Over the past fifteen years, we have begun to understand how selective permeability can be achieved for both cationic and anionic ions. Our mechanistic knowledge has expanded recently with studies of a large family of anion channels, the Formate Nitrite Transport (FNT) family. This family has proven amenable to structural studies at a resolution high enough to reveal intimate details of ion selectivity and gating. With five representative members having yielded a total of 15 crystal structures, this family represents one of the richest sources of structural information for anion channels.
Copyright © 2013 Elsevier Ltd. All rights reserved.

Entities:  

Mesh:

Substances:

Year:  2013        PMID: 23773802      PMCID: PMC3737415          DOI: 10.1016/j.sbi.2013.05.007

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  41 in total

1.  Electrostatics of nanosystems: application to microtubules and the ribosome.

Authors:  N A Baker; D Sept; S Joseph; M J Holst; J A McCammon
Journal:  Proc Natl Acad Sci U S A       Date:  2001-08-21       Impact factor: 11.205

2.  Secondary active transport mediated by a prokaryotic homologue of ClC Cl- channels.

Authors:  Alessio Accardi; Christopher Miller
Journal:  Nature       Date:  2004-02-26       Impact factor: 49.962

3.  Physiological and biochemical characterization of AnNitA, the Aspergillus nidulans high-affinity nitrite transporter.

Authors:  Shiela E Unkles; Vicki F Symington; Zorica Kotur; Ye Wang; M Yaeesh Siddiqi; James R Kinghorn; Anthony D M Glass
Journal:  Eukaryot Cell       Date:  2011-10-21

4.  HOLE: a program for the analysis of the pore dimensions of ion channel structural models.

Authors:  O S Smart; J G Neduvelil; X Wang; B A Wallace; M S Sansom
Journal:  J Mol Graph       Date:  1996-12

Review 5.  The formate/nitrite transporter family of anion channels.

Authors:  Wei Lü; Juan Du; Nikola J Schwarzer; Tobias Wacker; Susana L A Andrade; Oliver Einsle
Journal:  Biol Chem       Date:  2013-06       Impact factor: 3.915

6.  Structural and functional characterization of the nitrite channel NirC from Salmonella typhimurium.

Authors:  Wei Lü; Nikola J Schwarzer; Juan Du; Elke Gerbig-Smentek; Susana L A Andrade; Oliver Einsle
Journal:  Proc Natl Acad Sci U S A       Date:  2012-10-22       Impact factor: 11.205

7.  Structure and mechanism of a pentameric formate channel.

Authors:  Andrew B Waight; James Love; Da-Neng Wang
Journal:  Nat Struct Mol Biol       Date:  2009-12-13       Impact factor: 15.369

8.  The formate channel FocA exports the products of mixed-acid fermentation.

Authors:  Wei Lü; Juan Du; Nikola J Schwarzer; Elke Gerbig-Smentek; Oliver Einsle; Susana L A Andrade
Journal:  Proc Natl Acad Sci U S A       Date:  2012-07-30       Impact factor: 11.205

9.  Concerted movement in pH-dependent gating of FocA from molecular dynamics simulations.

Authors:  Zhiwei Feng; Tingjun Hou; Youyong Li
Journal:  J Chem Inf Model       Date:  2012-07-13       Impact factor: 4.956

10.  Unexpected oligomeric structure of the FocA formate channel of Escherichia coli : a paradigm for the formate-nitrite transporter family of integral membrane proteins.

Authors:  Dörte Falke; Kristin Schulz; Claudia Doberenz; Lydia Beyer; Hauke Lilie; Barbara Thiemer; Robert Gary Sawers
Journal:  FEMS Microbiol Lett       Date:  2009-11-23       Impact factor: 2.742

View more
  9 in total

1.  Mechanism of formate-nitrite transporters by dielectric shift of substrate acidity.

Authors:  Marie Wiechert; Eric Beitz
Journal:  EMBO J       Date:  2017-03-01       Impact factor: 11.598

2.  Pyruvate formate-lyase interacts directly with the formate channel FocA to regulate formate translocation.

Authors:  Claudia Doberenz; Michael Zorn; Dörte Falke; David Nannemann; Doreen Hunger; Lydia Beyer; Christian H Ihling; Jens Meiler; Andrea Sinz; R Gary Sawers
Journal:  J Mol Biol       Date:  2014-06-02       Impact factor: 5.469

Review 3.  Water in Nanopores and Biological Channels: A Molecular Simulation Perspective.

Authors:  Charlotte I Lynch; Shanlin Rao; Mark S P Sansom
Journal:  Chem Rev       Date:  2020-08-25       Impact factor: 60.622

4.  The glycyl-radical enzyme 2-ketobutyrate formate-lyase, TdcE, interacts specifically with the formate-translocating FNT-channel protein FocA.

Authors:  Dörte Falke; Claudia Doberenz; Doreen Hunger; R Gary Sawers
Journal:  Biochem Biophys Rep       Date:  2016-04-16

5.  The C-terminal Six Amino Acids of the FNT Channel FocA Are Required for Formate Translocation But Not Homopentamer Integrity.

Authors:  Doreen Hunger; Marie Röcker; Dörte Falke; Hauke Lilie; R Gary Sawers
Journal:  Front Microbiol       Date:  2017-08-22       Impact factor: 5.640

6.  Energetics and mechanism of anion permeation across formate-nitrite transporters.

Authors:  Kalina Atkovska; Jochen S Hub
Journal:  Sci Rep       Date:  2017-09-20       Impact factor: 4.379

7.  A single amino acid exchange converts FocA into a unidirectional efflux channel for formate.

Authors:  Michelle Kammel; Oliver Trebbin; Constanze Pinske; R Gary Sawers
Journal:  Microbiology (Reading)       Date:  2022-01       Impact factor: 2.777

8.  Distinguishing functional from structural roles of conserved pore residues during formate translocation by the FocA anion channel.

Authors:  Michelle Kammel; R Gary Sawers
Journal:  Microbiologyopen       Date:  2022-08       Impact factor: 3.904

9.  Is the E. coli Homolog of the Formate/Nitrite Transporter Family an Anion Channel? A Computational Study.

Authors:  Mishtu Mukherjee; Ankita Gupta; Ramasubbu Sankararamakrishnan
Journal:  Biophys J       Date:  2019-12-31       Impact factor: 4.033

  9 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.