Literature DB >> 23773520

A computational diffusion MRI and parametric dictionary learning framework for modeling the diffusion signal and its features.

Sylvain Merlet1, Emmanuel Caruyer, Aurobrata Ghosh, Rachid Deriche.   

Abstract

In this work, we first propose an original and efficient computational framework to model continuous diffusion MRI (dMRI) signals and analytically recover important diffusion features such as the Ensemble Average Propagator (EAP) and the Orientation Distribution Function (ODF). Then, we develop an efficient parametric dictionary learning algorithm and exploit the sparse property of a well-designed dictionary to recover the diffusion signal and its features with a reduced number of measurements. The properties and potentials of the technique are demonstrated using various simulations on synthetic data and on human brain data acquired from 7T and 3T scanners. It is shown that the technique can clearly recover the dMRI signal and its features with a much better accuracy compared to state-of-the-art approaches, even with a small and reduced number of measurements. In particular, we can accurately recover the ODF in regions of multiple fiber crossing, which could open new perspectives for some dMRI applications such as fiber tractography.
Copyright © 2013 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Dictionary learning; Diffusion MRI; Ensemble average propagator; Orientation distribution function; Sparse reconstruction

Mesh:

Year:  2013        PMID: 23773520     DOI: 10.1016/j.media.2013.04.011

Source DB:  PubMed          Journal:  Med Image Anal        ISSN: 1361-8415            Impact factor:   8.545


  6 in total

1.  Fingerprinting Orientation Distribution Functions in diffusion MRI detects smaller crossing angles.

Authors:  Steven H Baete; Martijn A Cloos; Ying-Chia Lin; Dimitris G Placantonakis; Timothy Shepherd; Fernando E Boada
Journal:  Neuroimage       Date:  2019-05-16       Impact factor: 6.556

2.  Markov Chain Monte Carlo Inference of Parametric Dictionaries for Sparse Bayesian Approximations.

Authors:  Theodora Chaspari; Andreas Tsiartas; Panagiotis Tsilifis; Shrikanth Narayanan
Journal:  IEEE Trans Signal Process       Date:  2016-03-07       Impact factor: 4.931

3.  Towards microstructure fingerprinting: Estimation of tissue properties from a dictionary of Monte Carlo diffusion MRI simulations.

Authors:  Gaëtan Rensonnet; Benoît Scherrer; Gabriel Girard; Aleksandar Jankovski; Simon K Warfield; Benoît Macq; Jean-Philippe Thiran; Maxime Taquet
Journal:  Neuroimage       Date:  2018-09-30       Impact factor: 6.556

4.  Dictionary-based fiber orientation estimation with improved spatial consistency.

Authors:  Chuyang Ye; Jerry L Prince
Journal:  Med Image Anal       Date:  2017-11-23       Impact factor: 8.545

5.  Diffusion MRI Connections in the Octopus Brain.

Authors:  Russell E Jacobs
Journal:  Exp Neurobiol       Date:  2022-02-28       Impact factor: 3.261

6.  Harmonization of diffusion MRI data sets with adaptive dictionary learning.

Authors:  Samuel St-Jean; Max A Viergever; Alexander Leemans
Journal:  Hum Brain Mapp       Date:  2020-08-26       Impact factor: 5.399

  6 in total

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