Literature DB >> 23770927

Kidney branching morphogenesis under the control of a ligand-receptor-based Turing mechanism.

Denis Menshykau1, Dagmar Iber.   

Abstract

The main signalling proteins that control early kidney branching have been defined. Yet the underlying mechanism is still elusive. We have previously shown that a Schnakenberg-type Turing mechanism can recapitulate the branching and protein expression patterns in wild-type and mutant lungs, but it is unclear whether this mechanism would extend to other branched organs that are regulated by other proteins. Here, we show that the glial cell line-derived neurotrophic factor-RET regulatory interaction gives rise to a Schnakenberg-type Turing model that reproduces the observed budding of the ureteric bud from the Wolffian duct, its invasion into the mesenchyme and the observed branching pattern. The model also recapitulates all relevant protein expression patterns in wild-type and mutant mice. The lung and kidney models are both based on a particular receptor-ligand interaction and require (1) cooperative binding of ligand and receptor, (2) a lower diffusion coefficient for the receptor than for the ligand and (3) an increase in the receptor concentration in response to receptor-ligand binding (by enhanced transcription, more recycling or similar). These conditions are met also by other receptor-ligand systems. We propose that ligand-receptor-based Turing patterns represent a general mechanism to control branching morphogenesis and other developmental processes.

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Year:  2013        PMID: 23770927     DOI: 10.1088/1478-3975/10/4/046003

Source DB:  PubMed          Journal:  Phys Biol        ISSN: 1478-3967            Impact factor:   2.583


  11 in total

1.  Studies of morphogens: keep calm and carry on.

Authors:  Angelike Stathopoulos; Dagmar Iber
Journal:  Development       Date:  2013-10       Impact factor: 6.868

2.  Autocrine inhibition of cell motility can drive epithelial branching morphogenesis in the absence of growth.

Authors:  Elisabeth G Rens; Mathé T Zeegers; Iraes Rabbers; András Szabó; Roeland M H Merks
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2020-07-27       Impact factor: 6.237

Review 3.  Cellular and physical mechanisms of branching morphogenesis.

Authors:  Victor D Varner; Celeste M Nelson
Journal:  Development       Date:  2014-07       Impact factor: 6.868

Review 4.  Development of the Mammalian Kidney.

Authors:  Andrew P McMahon
Journal:  Curr Top Dev Biol       Date:  2016-01-23       Impact factor: 4.897

Review 5.  Gene regulatory network of renal primordium development.

Authors:  Michael Marcotte; Richa Sharma; Maxime Bouchard
Journal:  Pediatr Nephrol       Date:  2013-10-09       Impact factor: 3.714

6.  Branching patterns emerge in a mathematical model of the dynamics of lung development.

Authors:  Yina Guo; Ting-Hsuan Chen; Xingjuan Zeng; David Warburton; Kristina I Boström; Chih-Ming Ho; Xin Zhao; Alan Garfinkel
Journal:  J Physiol       Date:  2013-11-18       Impact factor: 5.182

Review 7.  The control of branching morphogenesis.

Authors:  Dagmar Iber; Denis Menshykau
Journal:  Open Biol       Date:  2013-09-04       Impact factor: 6.411

8.  Bayesian inference of agent-based models: a tool for studying kidney branching morphogenesis.

Authors:  Ben Lambert; Adam L MacLean; Alexander G Fletcher; Alexander N Combes; Melissa H Little; Helen M Byrne
Journal:  J Math Biol       Date:  2018-02-01       Impact factor: 2.259

Review 9.  Organ-Specific Branching Morphogenesis.

Authors:  Christine Lang; Lisa Conrad; Dagmar Iber
Journal:  Front Cell Dev Biol       Date:  2021-06-07

10.  Turing Patterning Using Gene Circuits with Gas-Induced Degradation of Quorum Sensing Molecules.

Authors:  Bartłomiej Borek; Jeff Hasty; Lev Tsimring
Journal:  PLoS One       Date:  2016-05-05       Impact factor: 3.240

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