Literature DB >> 23749981

The Sinorhizobium meliloti essential porin RopA1 is a target for numerous bacteriophages.

Matthew B Crook1, Alicia L Draper, R Jordan Guillory, Joel S Griffitts.   

Abstract

The symbiotic nitrogen-fixing bacterium Sinorhizobium meliloti harbors a gene, SMc02396, which encodes a predicted outer membrane porin that is conserved in many symbiotic and pathogenic bacteria in the order Rhizobiales. Here, this gene (renamed ropA1) is shown to be required for infection by two commonly utilized transducing bacteriophages (ΦM12 and N3). Mapping of S. meliloti mutations conferring resistance to ΦM12, N3, or both phages simultaneously revealed diverse mutations mapping within the ropA1 open reading frame. Subsequent tests determined that RopA1, lipopolysaccharide, or both are required for infection by all of a larger collection of Sinorhizobium-specific phages. Failed attempts to disrupt or delete ropA1 suggest that this gene is essential for viability. Phylogenetic analysis reveals that ropA1 homologs in many Rhizobiales species are often found as two genetically linked copies and that the intraspecies duplicates are always more closely related to each other than to homologs in other species, suggesting multiple independent duplication events.

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Year:  2013        PMID: 23749981      PMCID: PMC3754576          DOI: 10.1128/JB.00480-13

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  44 in total

1.  SignalP 4.0: discriminating signal peptides from transmembrane regions.

Authors:  Thomas Nordahl Petersen; Søren Brunak; Gunnar von Heijne; Henrik Nielsen
Journal:  Nat Methods       Date:  2011-09-29       Impact factor: 28.547

2.  A genome-scale analysis for identification of genes required for growth or survival of Haemophilus influenzae.

Authors:  Brian J Akerley; Eric J Rubin; Veronica L Novick; Kensey Amaya; Nicholas Judson; John J Mekalanos
Journal:  Proc Natl Acad Sci U S A       Date:  2002-01-22       Impact factor: 11.205

3.  Genetic characterization of a Sinorhizobium meliloti chromosomal region in lipopolysaccharide biosynthesis.

Authors:  A Lagares; D F Hozbor; K Niehaus; A J Otero; J Lorenzen; W Arnold; A Pühler
Journal:  J Bacteriol       Date:  2001-02       Impact factor: 3.490

4.  Chronic intracellular infection of alfalfa nodules by Sinorhizobium meliloti requires correct lipopolysaccharide core.

Authors:  Gordon R O Campbell; Bradley L Reuhs; Graham C Walker
Journal:  Proc Natl Acad Sci U S A       Date:  2002-03-19       Impact factor: 11.205

5.  The Omp85 protein of Neisseria meningitidis is required for lipid export to the outer membrane.

Authors:  Stéphanie Genevrois; Liana Steeghs; Paul Roholl; Jean-Jacques Letesson; Peter van der Ley
Journal:  EMBO J       Date:  2003-04-15       Impact factor: 11.598

Review 6.  The structural biology of β-barrel membrane proteins: a summary of recent reports.

Authors:  James W Fairman; Nicholas Noinaj; Susan K Buchanan
Journal:  Curr Opin Struct Biol       Date:  2011-06-28       Impact factor: 6.809

7.  Complete genome sequencing of Agrobacterium sp. H13-3, the former Rhizobium lupini H13-3, reveals a tripartite genome consisting of a circular and a linear chromosome and an accessory plasmid but lacking a tumor-inducing Ti-plasmid.

Authors:  Daniel Wibberg; Jochen Blom; Sebastian Jaenicke; Florian Kollin; Oliver Rupp; Birgit Scharf; Susanne Schneiker-Bekel; Rafael Sczcepanowski; Alexander Goesmann; Joao Carlos Setubal; Rüdiger Schmitt; Alfred Pühler; Andreas Schlüter
Journal:  J Biotechnol       Date:  2011-02-15       Impact factor: 3.307

8.  progressiveMauve: multiple genome alignment with gene gain, loss and rearrangement.

Authors:  Aaron E Darling; Bob Mau; Nicole T Perna
Journal:  PLoS One       Date:  2010-06-25       Impact factor: 3.240

9.  Identification of the essential Brucella melitensis porin Omp2b as a suppressor of Bax-induced cell death in yeast in a genome-wide screening.

Authors:  Géraldine Laloux; Michaël Deghelt; Marie de Barsy; Jean-Jacques Letesson; Xavier De Bolle
Journal:  PLoS One       Date:  2010-10-11       Impact factor: 3.240

10.  Population genomics of the facultatively mutualistic bacteria Sinorhizobium meliloti and S. medicae.

Authors:  Brendan Epstein; Antoine Branca; Joann Mudge; Arvind K Bharti; Roman Briskine; Andrew D Farmer; Masayuki Sugawara; Nevin D Young; Michael J Sadowsky; Peter Tiffin
Journal:  PLoS Genet       Date:  2012-08-02       Impact factor: 5.917

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  5 in total

1.  Sinorhizobium meliloti Phage ΦM9 Defines a New Group of T4 Superfamily Phages with Unusual Genomic Features but a Common T=16 Capsid.

Authors:  Matthew C Johnson; Kelsey B Tatum; Jason S Lynn; Tess E Brewer; Stephen Lu; Brian K Washburn; M Elizabeth Stroupe; Kathryn M Jones
Journal:  J Virol       Date:  2015-08-26       Impact factor: 5.103

2.  Complete Genome Sequence of Sinorhizobium Phage ΦM6, the First Terrestrial Phage of a Marine Phage Group.

Authors:  Tess E Brewer; Brian K Washburn; Jason S Lynn; Kathryn M Jones
Journal:  Microbiol Resour Announc       Date:  2018-10-04

3.  Transcriptomic analysis of Rhizobium leguminosarum bacteroids in determinate and indeterminate nodules.

Authors:  R T Green; A K East; R Karunakaran; J A Downie; P S Poole
Journal:  Microb Genom       Date:  2019-02-19

4.  Diversity of Sinorhizobium (Ensifer) meliloti Bacteriophages in the Rhizosphere of Medicago marina: Myoviruses, Filamentous and N4-Like Podovirus.

Authors:  María Teresa Cubo; Cynthia Alías-Villegas; Eduardo Balsanelli; Dany Mesa; Emanuel de Souza; María Rosario Espuny
Journal:  Front Microbiol       Date:  2020-01-24       Impact factor: 5.640

5.  Properties and Phylogeny of 76 Families of Bacterial and Eukaryotic Organellar Outer Membrane Pore-Forming Proteins.

Authors:  Bhaskara L Reddy; Milton H Saier
Journal:  PLoS One       Date:  2016-04-11       Impact factor: 3.240

  5 in total

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