| Literature DB >> 23734163 |
Kouji Kobiyama1, Akira Kawashima, Nao Jounai, Fumihiko Takeshita, Ken J Ishii, Tetsuhide Ito, Koichi Suzuki.
Abstract
Histones are essential components of chromatin structure, and histone modification plays an important role in various cellular functions including transcription, gene silencing, and immunity. Histones also play distinct roles in extrachromosomal settings. Extrachromosomal histone H2B acts as a cytosolic sensor to detect double-stranded DNA (dsDNA) fragments derived from infectious agents or damaged cells to activate innate and acquired immune responses in various cell types. It also physically interacts with interferon (IFN)-β promoter stimulator 1 (IPS-1), an essential adaptor molecule that activates innate immunity, through COOH-terminal importin 9-related adaptor organizing histone H2B and IPS-1 (CIAO), resulting in a distinct signaling complex that induces dsDNA-induced type I IFN production. Such a molecular platform acts as a cellular sensor to recognize aberrant dsDNA in cases of viral infection and cell damage. This mechanism may also play roles in autoimmunity, transplantation rejection, gene-mediated vaccines, and other therapeutic applications.Entities:
Keywords: DNA damage; DNA sensor; epigenetic modifications; extrachromosomal histone; virus infection
Year: 2013 PMID: 23734163 PMCID: PMC3661947 DOI: 10.3389/fgene.2013.00091
Source DB: PubMed Journal: Front Genet ISSN: 1664-8021 Impact factor: 4.599
Cytosolic DNA sensors.
| DNA sensor | Localization | Pathogens | Nucleic acid ligand | Reference |
|---|---|---|---|---|
| ZBP-1/DAI | Cytoplasm | HSV | Poly(dA:dT), ISD | Takaoka et al. ( |
| AIM2 | Cytoplasm | VV, MCMV, | Calf thymus DNA, poly(dA:dT) | Burckstummer et al. ( |
| IFI16 | Cytoplasm | VV, HSV-1 | Poly(dA:dT) | Unterholzner et al. ( |
| RNA pol III/RIG-I | Cytoplasm | Poly(dA:dT) | Chiu et al. ( | |
| HMGB1 | Nucleus, extracellular | VSV, HSV-1 | dsDNA, dsRNA, ssDNA, ssRNA | Yanai et al. ( |
| Ku70 | Cytoplasm | HIV? | Plasmid DNA | Zhang et al. ( |
| LRRFIP1 | Cytoplasm | Poly(dA:dT) | Yang et al. ( | |
| DDX41 | Cytoplasm | Poly(dA:dT), c-d-GMP, c-d-AMP | Zhang et al. ( | |
| cGAS | Cytoplasm | HSV-1 | cGAMP | Sun et al. ( |
| Histone H2B | Nucleus, cytoplasm | HPV, AdV, HIV | Poly(dA:dT), genomic DNA | Kobiyama et al. ( |
HSV, herpes simplex virus; VV, vaccinia virus; MCMV, mouse cytomegalovirus; AdV, adenovirus; EBV, Epstein–Barr virus; VSV, vesicular stomatitis virus; HIV, human immunodeficiency virus; HPV, human papilloma virus; dA:dT, poly(dA-dT)·poly(dT-dA); ISD, immunostimulatory DNA.
Figure 1Histone H2B is a key factor for the suppression of viral replication. (A) HEK293 and HeLa cells were pretreated with control siRNA (Cont siRNA) or histone H2B siRNA (H2B siRNA). The cells were infected with AdV type 5 or EMCV. Twenty-four hours after infection, viral multiplication was determined by a plaque assay. (B) Magic 5 cells were pretreated with Cont siRNA or H2B siRNA. The cells were infected with HIV-1 IIIB for 3 h. Seventy-four hours after infection, viral multiplication was determined by HIV-1 p24 ELISA using culture supernatant.
Figure 2Mode of extrachromosomal histone H2B-mediated innate immune responses. Under normal conditions, histone H2B primarily localizes to the nucleus. In cases of cell damage or viral infection, histone H2B recognizes aberrant self- or non-self-derived dsDNA and forms an H2B-CIAO-IPS-1 interaction complex in the cytoplasm, which in turn activates TBK1 and induces IRF3 phosphorylation to produce type I IFN.