Literature DB >> 23731778

Visualizing molecular diffusion through passive permeability barriers in cells: conventional and novel approaches.

Yu-Chun Lin1, Siew Cheng Phua, Benjamin Lin, Takanari Inoue.   

Abstract

Diffusion barriers are universal solutions for cells to achieve distinct organizations, compositions, and activities within a limited space. The influence of diffusion barriers on the spatiotemporal dynamics of signaling molecules often determines cellular physiology and functions. Over the years, the passive permeability barriers in various subcellular locales have been characterized using elaborate analytical techniques. In this review, we will summarize the current state of knowledge on the various passive permeability barriers present in mammalian cells. We will conclude with a description of several conventional techniques and one new approach based on chemically inducible diffusion trap (CIDT) for probing permeable barriers.
Copyright © 2013 Elsevier Ltd. All rights reserved.

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Year:  2013        PMID: 23731778      PMCID: PMC3860267          DOI: 10.1016/j.cbpa.2013.04.027

Source DB:  PubMed          Journal:  Curr Opin Chem Biol        ISSN: 1367-5931            Impact factor:   8.822


  44 in total

1.  Neuronal activity regulates diffusion across the neck of dendritic spines.

Authors:  Brenda L Bloodgood; Bernardo L Sabatini
Journal:  Science       Date:  2005-11-04       Impact factor: 47.728

2.  Passive and facilitated transport in nuclear pore complexes is largely uncoupled.

Authors:  Bracha Naim; Vlad Brumfeld; Ruti Kapon; Vladimir Kiss; Reinat Nevo; Ziv Reich
Journal:  J Biol Chem       Date:  2006-12-12       Impact factor: 5.157

3.  Two-focus fluorescence correlation spectroscopy: a new tool for accurate and absolute diffusion measurements.

Authors:  Thomas Dertinger; Victor Pacheco; Iris von der Hocht; Rudolf Hartmann; Ingo Gregor; Jörg Enderlein
Journal:  Chemphyschem       Date:  2007-02-19       Impact factor: 3.102

Review 4.  Overview of structure and function of mammalian cilia.

Authors:  Peter Satir; Søren Tvorup Christensen
Journal:  Annu Rev Physiol       Date:  2007       Impact factor: 19.318

Review 5.  Anatomical and physiological plasticity of dendritic spines.

Authors:  Veronica A Alvarez; Bernardo L Sabatini
Journal:  Annu Rev Neurosci       Date:  2007       Impact factor: 12.449

6.  A selective filter for cytoplasmic transport at the axon initial segment.

Authors:  Ai-Hong Song; Dong Wang; Gang Chen; Yuju Li; Jianhong Luo; Shumin Duan; Mu-Ming Poo
Journal:  Cell       Date:  2009-03-05       Impact factor: 41.582

7.  Real-time multi-parameter spectroscopy and localization in three-dimensional single-particle tracking.

Authors:  Christian Hellriegel; Enrico Gratton
Journal:  J R Soc Interface       Date:  2009-02-06       Impact factor: 4.118

Review 8.  Crowding effects on diffusion in solutions and cells.

Authors:  James A Dix; A S Verkman
Journal:  Annu Rev Biophys       Date:  2008       Impact factor: 12.981

Review 9.  The primary cilium as the cell's antenna: signaling at a sensory organelle.

Authors:  Veena Singla; Jeremy F Reiter
Journal:  Science       Date:  2006-08-04       Impact factor: 47.728

10.  AnkyrinG is required for maintenance of the axon initial segment and neuronal polarity.

Authors:  Kristian L Hedstrom; Yasuhiro Ogawa; Matthew N Rasband
Journal:  J Cell Biol       Date:  2008-11-10       Impact factor: 10.539

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  2 in total

1.  Molecular exclusion limits for diffusion across a porous capsid.

Authors:  Ekaterina Selivanovitch; Benjamin LaFrance; Trevor Douglas
Journal:  Nat Commun       Date:  2021-05-18       Impact factor: 14.919

2.  Regulation of nuclear NF-κB oscillation by a diffusion coefficient and its biological implications.

Authors:  Daisuke Ohshima; Kazuhisa Ichikawa
Journal:  PLoS One       Date:  2014-10-10       Impact factor: 3.240

  2 in total

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