Literature DB >> 18753123

Real-time multi-parameter spectroscopy and localization in three-dimensional single-particle tracking.

Christian Hellriegel1, Enrico Gratton.   

Abstract

Tracking of single particles in optical microscopy has been employed in studies ranging from material sciences to biophysics down to the level of single molecules. The technique intrinsically circumvents ensemble averaging and may therefore reveal directly mechanistic details of the involved dynamic processes. Such processes range from translational and rotational motion to spectral dynamics. We distinguish between conventional a posteriori tracking of objects (e.g. from the sequences of images) and the experimentally more refined 'on-the-fly' tracking technique. In this technique, the observation volume of the microscope is kept centred with respect to the moving object via a feedback algorithm. This approach brings a series of advantages in comparison with the tracking from images, ranging from a superior spatio-temporal resolution (2-50nm and 1-32ms) to the capability of inferring additional data (e.g. fluorescence lifetime, emission spectrum, polarization, intensity dynamics) from an object as it moves over several microns in three dimensions. In this contribution, we describe the principle of the tracking technique as implemented on a two-photon laser scanning microscope and illustrate its capabilities with experimental data, from particles labelled with different dyes moving in a liquid to the characterization of small fluorescently labelled protein assemblies in living cells.

Mesh:

Year:  2009        PMID: 18753123      PMCID: PMC2706464          DOI: 10.1098/rsif.2008.0313.focus

Source DB:  PubMed          Journal:  J R Soc Interface        ISSN: 1742-5662            Impact factor:   4.118


  16 in total

1.  Fluorescence microscopy with diffraction resolution barrier broken by stimulated emission.

Authors:  T A Klar; S Jakobs; M Dyba; A Egner; S W Hell
Journal:  Proc Natl Acad Sci U S A       Date:  2000-07-18       Impact factor: 11.205

Review 2.  Single-molecule fluorescence resonance energy transfer.

Authors:  T Ha
Journal:  Methods       Date:  2001-09       Impact factor: 3.608

3.  Chromatin dynamics in interphase cells revealed by tracking in a two-photon excitation microscope.

Authors:  Valeria Levi; QiaoQiao Ruan; Matthew Plutz; Andrew S Belmont; Enrico Gratton
Journal:  Biophys J       Date:  2005-09-08       Impact factor: 4.033

4.  Sub-diffraction-limit imaging by stochastic optical reconstruction microscopy (STORM).

Authors:  Michael J Rust; Mark Bates; Xiaowei Zhuang
Journal:  Nat Methods       Date:  2006-08-09       Impact factor: 28.547

5.  Macromolecular-scale resolution in biological fluorescence microscopy.

Authors:  Gerald Donnert; Jan Keller; Rebecca Medda; M Alexandra Andrei; Silvio O Rizzoli; Reinhard Lührmann; Reinhard Jahn; Christian Eggeling; Stefan W Hell
Journal:  Proc Natl Acad Sci U S A       Date:  2006-07-24       Impact factor: 11.205

6.  Exploration of nanostructured channel systems with single-molecule probes.

Authors:  Johanna Kirstein; Barbara Platschek; Christophe Jung; Ross Brown; Thomas Bein; Christoph Bräuchle
Journal:  Nat Mater       Date:  2007-03-11       Impact factor: 43.841

7.  High-density mapping of single-molecule trajectories with photoactivated localization microscopy.

Authors:  Suliana Manley; Jennifer M Gillette; George H Patterson; Hari Shroff; Harald F Hess; Eric Betzig; Jennifer Lippincott-Schwartz
Journal:  Nat Methods       Date:  2008-01-13       Impact factor: 28.547

Review 8.  Single-particle tracking: applications to membrane dynamics.

Authors:  M J Saxton; K Jacobson
Journal:  Annu Rev Biophys Biomol Struct       Date:  1997

9.  Free Brownian motion of individual lipid molecules in biomembranes.

Authors:  A Sonnleitner; G J Schütz; T Schmidt
Journal:  Biophys J       Date:  1999-11       Impact factor: 4.033

10.  Are quantum dots ready for in vivo imaging in human subjects?

Authors:  Weibo Cai; Andrew R Hsu; Zi-Bo Li; Xiaoyuan Chen
Journal:  Nanoscale Res Lett       Date:  2007-06       Impact factor: 4.703

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  14 in total

1.  Spectroscopic properties of gold nanoparticles at the single-particle level in biological environments.

Authors:  Laura C Estrada; Enrico Gratton
Journal:  Chemphyschem       Date:  2012-02-01       Impact factor: 3.102

2.  Measurement of distance with the nanoscale precise imaging by rapid beam oscillation method.

Authors:  Luca Lanzano; Enrico Gratton
Journal:  Microsc Res Tech       Date:  2012-04-19       Impact factor: 2.769

3.  Intracellular trafficking of cationic liposome-DNA complexes in living cells.

Authors:  Stefano Coppola; Laura C Estrada; Michelle A Digman; Daniela Pozzi; Francesco Cardarelli; Enrico Gratton; Giulio Caracciolo
Journal:  Soft Matter       Date:  2012-08-14       Impact factor: 3.679

4.  Fast molecular tracking maps nanoscale dynamics of plasma membrane lipids.

Authors:  Steffen J Sahl; Marcel Leutenegger; Michael Hilbert; Stefan W Hell; Christian Eggeling
Journal:  Proc Natl Acad Sci U S A       Date:  2010-03-29       Impact factor: 11.205

5.  Number and brightness image analysis reveals ATF-induced dimerization kinetics of uPAR in the cell membrane.

Authors:  Christian Hellriegel; Valeria R Caiolfa; Valeria Corti; Nicolai Sidenius; Moreno Zamai
Journal:  FASEB J       Date:  2011-05-20       Impact factor: 5.191

Review 6.  Guidelines for DNA recombination and repair studies: Mechanistic assays of DNA repair processes.

Authors:  Hannah L Klein; Kenny K H Ang; Michelle R Arkin; Emily C Beckwitt; Yi-Hsuan Chang; Jun Fan; Youngho Kwon; Michael J Morten; Sucheta Mukherjee; Oliver J Pambos; Hafez El Sayyed; Elizabeth S Thrall; João P Vieira-da-Rocha; Quan Wang; Shuang Wang; Hsin-Yi Yeh; Julie S Biteen; Peter Chi; Wolf-Dietrich Heyer; Achillefs N Kapanidis; Joseph J Loparo; Terence R Strick; Patrick Sung; Bennett Van Houten; Hengyao Niu; Eli Rothenberg
Journal:  Microb Cell       Date:  2019-01-07

7.  Three-Dimensional Two-Color Dual-Particle Tracking Microscope for Monitoring DNA Conformational Changes and Nanoparticle Landings on Live Cells.

Authors:  Yen-Liang Liu; Evan P Perillo; Phyllis Ang; Mirae Kim; Duc Trung Nguyen; Katherine Blocher; Yu-An Chen; Cong Liu; Ahmed M Hassan; Huong T Vu; Yuan-I Chen; Andrew K Dunn; Hsin-Chih Yeh
Journal:  ACS Nano       Date:  2020-07-15       Impact factor: 15.881

8.  Effects of macromolecular crowding on intracellular diffusion from a single particle perspective.

Authors:  Damien Hall; Masaru Hoshino
Journal:  Biophys Rev       Date:  2010-02-06

9.  Orbital Single Particle Tracking on a commercial confocal microscope using piezoelectric stage feedback.

Authors:  Luca Lanzanò; Enrico Gratton
Journal:  Methods Appl Fluoresc       Date:  2014-06-01       Impact factor: 3.009

Review 10.  Visualizing molecular diffusion through passive permeability barriers in cells: conventional and novel approaches.

Authors:  Yu-Chun Lin; Siew Cheng Phua; Benjamin Lin; Takanari Inoue
Journal:  Curr Opin Chem Biol       Date:  2013-05-31       Impact factor: 8.822

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