Literature DB >> 2373080

Thermodynamic nonideality in macromolecular solutions. Evaluation of parameters for the prediction of covolume effects.

K E Shearwin1, D J Winzor.   

Abstract

Second virial coefficients and hence covolumes for self-interaction of five proteins, viz. ribonuclease, ovalbumin, bovine serum albumin, catalase and alpha-crystallin, have been determined by analyzing the concentration dependence of the partition coefficient obtained from frontal chromatographic studies on either Fractogel TSK HW55 or porous glass beads. The resulting estimates of the effective radii essentially duplicate their Stokes counterparts and thereby provide further justification for assuming the approximate identity of the thermodynamic and hydrodynamic radii of hydrated globular proteins. Gel chromatographic evaluation of second virial coefficients for protein/dextran systems has led to elimination of the sphere/sphere model as a valid thermodynamic description of the space-filling effects in protein/polymer mixtures, since it does not predict the observed independence of covolume, expressed per unit mass of polymer, upon size of the polymer. This requirement is met by the sphere/rod model [Edmond, E. & Ogston, A. G. (1968) Biochem. J. 109, 569-576] and also by the sphere/flexible-segment model [Hermans, J. (1982) J. Chem. Phys. 77, 2193-2203]. Furthermore, similar studies of the effect of solute radius on covolume for interaction with dextran T70 attest to the adequacy of either model for predicting the thermodynamic nonideality arising from the inclusion of dextrans in protein solutions, and also provide the relevant calibration of the model.

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Year:  1990        PMID: 2373080     DOI: 10.1111/j.1432-1033.1990.tb15605.x

Source DB:  PubMed          Journal:  Eur J Biochem        ISSN: 0014-2956


  11 in total

1.  COVOL: an interactive program for evaluating second virial coefficients from the triaxial shape or dimensions of rigid macromolecules.

Authors:  S E Harding; J C Horton; S Jones; J M Thornton; D J Winzor
Journal:  Biophys J       Date:  1999-05       Impact factor: 4.033

2.  Macromolecular crowding and volume perception in dog red cells.

Authors:  J C Parker; G C Colclasure
Journal:  Mol Cell Biochem       Date:  1992-09-08       Impact factor: 3.396

3.  Measurements of protein-protein interactions by size exclusion chromatography.

Authors:  J Bloustine; V Berejnov; S Fraden
Journal:  Biophys J       Date:  2003-10       Impact factor: 4.033

4.  Determination of the second virial coefficient of bovine serum albumin under varying pH and ionic strength by composition-gradient multi-angle static light scattering.

Authors:  Yingfang Ma; Diana M Acosta; Jon R Whitney; Rudolf Podgornik; Nicole F Steinmetz; Roger H French; V Adrian Parsegian
Journal:  J Biol Phys       Date:  2014-11-18       Impact factor: 1.365

Review 5.  Foreword to 'Quantitative and analytical relations in biochemistry'-a special issue in honour of Donald J. Winzor's 80th birthday.

Authors:  Damien Hall; Stephen E Harding
Journal:  Biophys Rev       Date:  2016-11-04

Review 6.  Mineralization and non-ideality: on nature's foundry.

Authors:  Ashit Rao; Helmut Cölfen
Journal:  Biophys Rev       Date:  2016-11-21

7.  Conformational sampling of peptides in the presence of protein crowders from AA/CG-multiscale simulations.

Authors:  Alexander V Predeus; Seref Gul; Srinivasa M Gopal; Michael Feig
Journal:  J Phys Chem B       Date:  2012-04-05       Impact factor: 2.991

8.  Controllable Soluble Protein Concentration Gradients in Hydrogel Networks.

Authors:  Brian J Peret; William L Murphy
Journal:  Adv Funct Mater       Date:  2008-11-01       Impact factor: 18.808

9.  Dynamic Crowding Regulates Transcription.

Authors:  Anne R Shim; Rikkert J Nap; Kai Huang; Luay M Almassalha; Hiroaki Matusda; Vadim Backman; Igal Szleifer
Journal:  Biophys J       Date:  2019-11-15       Impact factor: 4.033

Review 10.  Folding, stability and shape of proteins in crowded environments: experimental and computational approaches.

Authors:  Antonios Samiotakis; Pernilla Wittung-Stafshede; Margaret S Cheung
Journal:  Int J Mol Sci       Date:  2009-02-13       Impact factor: 6.208

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