Literature DB >> 23729896

Analysis of Bacterial Community in the Ginseng Soil Using Denaturing Gradient Gel Electrophoresis (DGGE).

Regupathy Thamizh Vendan1, Sun Hee Lee, Young Joon Yu, Young Ha Rhee.   

Abstract

The objective of this work was to determine the shifts in the PCR-DGGE profiles of bacterial communities associated with the rhizosphere soil of ginseng at varying age levels. Differences in the dominance of intense DNA bands in the DGGE profile was observed over the age of the plants indicating the fluctuation in the microbial community structure. The bacterial orders of actinomycetales of Actinobacteria and Spingomonadales and Rhizobiales of α-Proteobacteria were predominant in the ginseng soil.

Entities:  

Keywords:  Bacterial community; DGGE; Korean ginseng soil

Year:  2011        PMID： 23729896      PMCID： PMC3386446          DOI： 10.1007/s12088-011-0193-3

Source DB:  PubMed          Journal:  Indian J Microbiol        ISSN： 0046-8991            Impact factor:   2.461


  3 in total

1.  Modulating effects of Korean ginseng saponins on ovarian function in immature rats.

Authors:  Wook-Joon Yu; Beom-Jun Lee; Sang-Yoon Nam; Deok-Chun Yang; Young-Won Yun
Journal:  Biol Pharm Bull       Date:  2003-11       Impact factor: 2.233

Review 2.  PCR-DGGE fingerprinting: novel strategies for detection of microbes in food.

Authors:  Danilo Ercolini
Journal:  J Microbiol Methods       Date:  2004-03       Impact factor: 2.363

3.  Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA.

Authors:  G Muyzer; E C de Waal; A G Uitterlinden
Journal:  Appl Environ Microbiol       Date:  1993-03       Impact factor: 4.792
  3 in total
  7 in total

1.  Microbial Community Changes in the Rhizosphere Soil of Healthy and Rusty Panax ginseng and Discovery of Pivotal Fungal Genera Associated with Rusty Roots.

Authors:  Xuemin Wei; Xiaoyue Wang; Pei Cao; Zitong Gao; Amanda Juan Chen; Jianping Han
Journal:  Biomed Res Int       Date:  2020-01-15       Impact factor: 3.411

2.  Different Age-Induced Changes in Rhizosphere Microbial Composition and Function of Panax ginseng in Transplantation Mode.

Authors:  Qiuxia Wang; Hai Sun; Meijia Li; Chenglu Xu; Yayu Zhang
Journal:  Front Plant Sci       Date:  2020-11-12       Impact factor: 5.753

3.  Intercropping Alters the Soil Microbial Diversity and Community to Facilitate Nitrogen Assimilation: A Potential Mechanism for Increasing Proso Millet Grain Yield.

Authors:  Ke Dang; Xiangwei Gong; Guan Zhao; Honglu Wang; Aliaksandr Ivanistau; Baili Feng
Journal:  Front Microbiol       Date:  2020-11-24       Impact factor: 5.640

4.  Diversity and composition of the Panax ginseng rhizosphere microbiome in various cultivation modesand ages.

Authors:  Ai-Zi Tong; Wei Liu; Qiang Liu; Guang-Qing Xia; Jun-Yi Zhu
Journal:  BMC Microbiol       Date:  2021-01-08       Impact factor: 3.605

5.  Effects of cultivation ages and modes on microbial diversity in the rhizosphere soil of Panax ginseng.

Authors:  Chunping Xiao; Limin Yang; Lianxue Zhang; Cuijing Liu; Mei Han
Journal:  J Ginseng Res       Date:  2015-04-30       Impact factor: 6.060

6.  Bacterial Diversity and Community Structure in Korean Ginseng Field Soil Are Shifted by Cultivation Time.

Authors:  Ngoc-Lan Nguyen; Yeon-Ju Kim; Van-An Hoang; Sathiyamoorthy Subramaniyam; Jong-Pyo Kang; Chang Ho Kang; Deok-Chun Yang
Journal:  PLoS One       Date:  2016-05-17       Impact factor: 3.240

7.  Structure and Function of Rhizosphere Soil and Root Endophytic Microbial Communities Associated With Root Rot of Panax notoginseng.

Authors:  Panpan Wang; Lifang Yang; Jialing Sun; Ye Yang; Yuan Qu; Chengxiao Wang; Diqiu Liu; Luqi Huang; Xiuming Cui; Yuan Liu
Journal:  Front Plant Sci       Date:  2022-01-05       Impact factor: 5.753
  7 in total

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