Literature DB >> 14967221

PCR-DGGE fingerprinting: novel strategies for detection of microbes in food.

Danilo Ercolini1.   

Abstract

Polymerase chain reaction denaturing gradient gel electrophoresis (PCR-DGGE) fingerprinting was recently introduced into food microbiology. This paper describes the technique and reports on the state-of-the-art application of this technique to food and food-related ecosystems. Applications of PCR-DGGE in several fields of food microbiology are reviewed: the identification of microorganisms isolated from food, the evaluation of microbial diversity during food fermentation, and microbiological and commercial food quality assessment. Potentials and limitations of this culture-independent approach in food microbiology are indicated and future perspectives are discussed.

Mesh:

Year:  2004        PMID: 14967221     DOI: 10.1016/j.mimet.2003.11.006

Source DB:  PubMed          Journal:  J Microbiol Methods        ISSN: 0167-7012            Impact factor:   2.363


  76 in total

1.  High-throughput sequencing for detection of subpopulations of bacteria not previously associated with artisanal cheeses.

Authors:  Lisa Quigley; Orla O'Sullivan; Tom P Beresford; R Paul Ross; Gerald F Fitzgerald; Paul D Cotter
Journal:  Appl Environ Microbiol       Date:  2012-06-08       Impact factor: 4.792

2.  Assessment of microbial populations dynamics in a blue cheese by culturing and denaturing gradient gel electrophoresis.

Authors:  Angel Alegría; Renata González; Mario Díaz; Baltasar Mayo
Journal:  Curr Microbiol       Date:  2010-11-04       Impact factor: 2.188

3.  Analysis of oral microbiota in children with dental caries by PCR-DGGE and barcoded pyrosequencing.

Authors:  Zongxin Ling; Jianming Kong; Peng Jia; Chaochun Wei; Yuezhu Wang; Zhiwen Pan; Wujing Huang; Lanjuan Li; Hui Chen; Charlie Xiang
Journal:  Microb Ecol       Date:  2010-07-08       Impact factor: 4.552

4.  Dynamic analysis of the Lactococcus lactis transcriptome in cheeses made from milk concentrated by ultrafiltration reveals multiple strategies of adaptation to stresses.

Authors:  Marina Cretenet; Valérie Laroute; Vincent Ulvé; Sophie Jeanson; Sébastien Nouaille; Sergine Even; Michel Piot; Laurence Girbal; Yves Le Loir; Pascal Loubière; Sylvie Lortal; Muriel Cocaign-Bousquet
Journal:  Appl Environ Microbiol       Date:  2010-11-12       Impact factor: 4.792

5.  Archaeal Distribution in Moonmilk Deposits from Alpine Caves and Their Ecophysiological Potential.

Authors:  Christoph Reitschuler; Christoph Spötl; Katrin Hofmann; Andreas O Wagner; Paul Illmer
Journal:  Microb Ecol       Date:  2016-01-20       Impact factor: 4.552

6.  Unique sequence characteristics account for good DGGE separation of almost full-length 18S rDNAs.

Authors:  Zhiqing Huang; Xinxin Ke; Xiaodan Lv; Zhibin Liu; Li Ni
Journal:  World J Microbiol Biotechnol       Date:  2016-02-12       Impact factor: 3.312

7.  Direct molecular approach to monitoring bacterial colonization on vacuum-packaged beef.

Authors:  Cecilia Fontana; Pier Sandro Cocconcelli; Graciela Vignolo
Journal:  Appl Environ Microbiol       Date:  2006-08       Impact factor: 4.792

8.  Biodiversity of bacterial ecosystems in traditional Egyptian Domiati cheese.

Authors:  Gaber El-Baradei; Agnès Delacroix-Buchet; Jean-Claude Ogier
Journal:  Appl Environ Microbiol       Date:  2006-12-22       Impact factor: 4.792

9.  Evaluation of freeze-dried kefir coculture as starter in feta-type cheese production.

Authors:  Y Kourkoutas; P Kandylis; P Panas; J S G Dooley; P Nigam; A A Koutinas
Journal:  Appl Environ Microbiol       Date:  2006-09       Impact factor: 4.792

10.  Taxonomic structure and stability of the bacterial community in belgian sourdough ecosystems as assessed by culture and population fingerprinting.

Authors:  Ilse Scheirlinck; Roel Van der Meulen; Ann Van Schoor; Marc Vancanneyt; Luc De Vuyst; Peter Vandamme; Geert Huys
Journal:  Appl Environ Microbiol       Date:  2008-02-29       Impact factor: 4.792

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