Literature DB >> 23729810

The cost of efficiency in energy metabolism.

Arion I Stettner1, Daniel Segrè.   

Abstract

Mesh:

Substances:

Year:  2013        PMID: 23729810      PMCID: PMC3683743          DOI: 10.1073/pnas.1307485110

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


× No keyword cloud information.
  15 in total

1.  Diminishing returns epistasis among beneficial mutations decelerates adaptation.

Authors:  Hsin-Hung Chou; Hsuan-Chao Chiu; Nigel F Delaney; Daniel Segrè; Christopher J Marx
Journal:  Science       Date:  2011-06-03       Impact factor: 47.728

2.  Energy balance for analysis of complex metabolic networks.

Authors:  Daniel A Beard; Shou-dan Liang; Hong Qian
Journal:  Biophys J       Date:  2002-07       Impact factor: 4.033

Review 3.  The Entner-Doudoroff pathway: history, physiology and molecular biology.

Authors:  T Conway
Journal:  FEMS Microbiol Rev       Date:  1992-09       Impact factor: 16.408

4.  Fundamental Escherichia coli biochemical pathways for biomass and energy production: creation of overall flux states.

Authors:  Ross Carlson; Friedrich Srienc
Journal:  Biotechnol Bioeng       Date:  2004-04-20       Impact factor: 4.530

5.  Genome-scale thermodynamic analysis of Escherichia coli metabolism.

Authors:  Christopher S Henry; Matthew D Jankowski; Linda J Broadbelt; Vassily Hatzimanikatis
Journal:  Biophys J       Date:  2005-11-18       Impact factor: 4.033

Review 6.  Evolution of carbohydrate metabolic pathways.

Authors:  A H Romano; T Conway
Journal:  Res Microbiol       Date:  1996 Jul-Sep       Impact factor: 3.992

7.  Thermodynamic efficiency of microbial growth is low but optimal for maximal growth rate.

Authors:  H V Westerhoff; K J Hellingwerf; K Van Dam
Journal:  Proc Natl Acad Sci U S A       Date:  1983-01       Impact factor: 11.205

8.  Evolutionary optimization of metabolic pathways. Theoretical reconstruction of the stoichiometry of ATP and NADH producing systems.

Authors:  O Ebenhöh; R Heinrich
Journal:  Bull Math Biol       Date:  2001-01       Impact factor: 1.758

9.  Cooperation and competition in the evolution of ATP-producing pathways.

Authors:  T Pfeiffer; S Schuster; S Bonhoeffer
Journal:  Science       Date:  2001-03-29       Impact factor: 47.728

10.  Glycolytic strategy as a tradeoff between energy yield and protein cost.

Authors:  Avi Flamholz; Elad Noor; Arren Bar-Even; Wolfram Liebermeister; Ron Milo
Journal:  Proc Natl Acad Sci U S A       Date:  2013-04-29       Impact factor: 11.205

View more
  19 in total

1.  The functional structure of central carbon metabolism in Pseudomonas putida KT2440.

Authors:  Suresh Sudarsan; Sarah Dethlefsen; Lars M Blank; Martin Siemann-Herzberg; Andreas Schmid
Journal:  Appl Environ Microbiol       Date:  2014-06-20       Impact factor: 4.792

2.  Pseudomonas putida KT2440 Strain Metabolizes Glucose through a Cycle Formed by Enzymes of the Entner-Doudoroff, Embden-Meyerhof-Parnas, and Pentose Phosphate Pathways.

Authors:  Pablo I Nikel; Max Chavarría; Tobias Fuhrer; Uwe Sauer; Víctor de Lorenzo
Journal:  J Biol Chem       Date:  2015-09-08       Impact factor: 5.157

Review 3.  Lactate as an insidious metabolite due to the Warburg effect.

Authors:  Raymond Luc; Stephanie M Tortorella; Katherine Ververis; Tom C Karagiannis
Journal:  Mol Biol Rep       Date:  2015-04       Impact factor: 2.316

4.  Energetic scaling in microbial growth.

Authors:  Salvatore Calabrese; Arjun Chakrawal; Stefano Manzoni; Philippe Van Cappellen
Journal:  Proc Natl Acad Sci U S A       Date:  2021-11-23       Impact factor: 11.205

5.  Laboratory evolution of synthetic electron transport system variants reveals a larger metabolic respiratory system and its plasticity.

Authors:  Amitesh Anand; Arjun Patel; Ke Chen; Connor A Olson; Patrick V Phaneuf; Cameron Lamoureux; Ying Hefner; Richard Szubin; Adam M Feist; Bernhard O Palsson
Journal:  Nat Commun       Date:  2022-06-27       Impact factor: 17.694

6.  Global microbialization of coral reefs.

Authors:  Andreas F Haas; Mohamed F M Fairoz; Linda W Kelly; Craig E Nelson; Elizabeth A Dinsdale; Robert A Edwards; Steve Giles; Mark Hatay; Nao Hisakawa; Ben Knowles; Yan Wei Lim; Heather Maughan; Olga Pantos; Ty N F Roach; Savannah E Sanchez; Cynthia B Silveira; Stuart Sandin; Jennifer E Smith; Forest Rohwer
Journal:  Nat Microbiol       Date:  2016-04-25       Impact factor: 17.745

7.  Constrained Allocation Flux Balance Analysis.

Authors:  Matteo Mori; Terence Hwa; Olivier C Martin; Andrea De Martino; Enzo Marinari
Journal:  PLoS Comput Biol       Date:  2016-06-29       Impact factor: 4.475

8.  Pre- and post-weaning diet alters the faecal metagenome in the cat with differences in vitamin and carbohydrate metabolism gene abundances.

Authors:  Wayne Young; Christina D Moon; David G Thomas; Nick J Cave; Emma N Bermingham
Journal:  Sci Rep       Date:  2016-11-23       Impact factor: 4.379

9.  Genome-scale modeling and transcriptome analysis of Leuconostoc mesenteroides unravel the redox governed metabolic states in obligate heterofermentative lactic acid bacteria.

Authors:  Lokanand Koduru; Yujin Kim; Jeongsu Bang; Meiyappan Lakshmanan; Nam Soo Han; Dong-Yup Lee
Journal:  Sci Rep       Date:  2017-11-16       Impact factor: 4.379

10.  Modeling central metabolism and energy biosynthesis across microbial life.

Authors:  Janaka N Edirisinghe; Pamela Weisenhorn; Neal Conrad; Fangfang Xia; Ross Overbeek; Rick L Stevens; Christopher S Henry
Journal:  BMC Genomics       Date:  2016-08-08       Impact factor: 3.969

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.