Literature DB >> 23727113

Identification and characterization of toxin-antitoxin systems in strains of Lactobacillus rhamnosus isolated from humans.

K M Klimina1, D K Kjasova, E U Poluektova, H Krügel, Y Leuschner, H-P Saluz, V N Danilenko.   

Abstract

The toxin-antitoxin gene systems (TASs) are present in the genomes of the overwhelming majority of bacteria and archaea. These systems are involved in various cellular regulatory processes (including stress response), and have not been previously investigated in Lactobacilli. We identified 6 putative TASs with toxins belonging to the MazE and RelE superfamilies (PemK1-А1Lrh, PemK2-А2Lrh, PemK3-RelB2Lrh, RelE1Lrh, RelB3-RelE3Lrh, and YefM-YoeBLrh) in the genomes of annotated strains of Lactobacillus rhamnosus. PCR analyses revealed that all systems were found in the genomes of 15 strains of L. rhamnosus isolated from humans in central Russia. These strains were highly heterogeneous with respect to the presence of TASs, as well as their nucleotide and amino acid sequences. In three cases, the relE1 genes contained IS3 elements. TAS heterogeneity may be used to reveal inter-genus differences between strains. Cloning of the toxin genes of 3 TASs inhibited Escherichia coli growth, thus confirming their functionality. Cell growth arrest caused by expression of the toxin genes could be reverted by the expression of a cognate antitoxins. Transcription of toxin-antitoxin loci in L. rhamnosus was shown by RT-PCR.
Copyright © 2013 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  Lactobacillus rhamnosus; Strain polymorphism; TA; TAS; Toxin–antitoxin systems; toxin–antitoxin; toxin–antitoxin system

Mesh:

Substances:

Year:  2013        PMID: 23727113     DOI: 10.1016/j.anaerobe.2013.05.007

Source DB:  PubMed          Journal:  Anaerobe        ISSN: 1075-9964            Impact factor:   3.331


  14 in total

Review 1.  Toxin-antitoxin systems and their medical applications: current status and future perspective.

Authors:  Akriti Srivastava; Soumya Pati; Himani Kaushik; Shailja Singh; Lalit C Garg
Journal:  Appl Microbiol Biotechnol       Date:  2021-02-13       Impact factor: 4.813

2.  Transcriptomic and proteomic profiling revealed global changes in Streptococcus thermophilus during pH-controlled batch fermentations.

Authors:  Yali Qiao; Cong Leng; Gefei Liu; Yanjiao Zhang; Xuepeng Lv; Hongyu Chen; Jiahui Sun; Zhen Feng
Journal:  J Microbiol       Date:  2019-06-14       Impact factor: 3.422

3.  Bioinformatic and mutational studies of related toxin-antitoxin pairs in Mycobacterium tuberculosis predict and identify key functional residues.

Authors:  Himani Tandon; Arun Sharma; Saruchi Wadhwa; Raghavan Varadarajan; Ramandeep Singh; Narayanaswamy Srinivasan; Sankaran Sandhya
Journal:  J Biol Chem       Date:  2019-04-24       Impact factor: 5.157

4.  Identification of Type II Toxin-Antitoxin Loci in Levilactobacillus brevis.

Authors:  Ying-Xian Goh; Yang He; Hong-Yu Ou
Journal:  Interdiscip Sci       Date:  2021-10-18       Impact factor: 2.233

5.  Mycobacterium tuberculosis Type II Toxin-Antitoxin Systems: Genetic Polymorphisms and Functional Properties and the Possibility of Their Use for Genotyping.

Authors:  Marina V Zaychikova; Natalia V Zakharevich; Maria O Sagaidak; Nadezhda A Bogolubova; Tatiana G Smirnova; Sofya N Andreevskaya; Elena E Larionova; Maria G Alekseeva; Larisa N Chernousova; Valery N Danilenko
Journal:  PLoS One       Date:  2015-12-14       Impact factor: 3.240

6.  Toward the identification of a type I toxin-antitoxin system in the plasmid DNA of dairy Lactobacillus rhamnosus.

Authors:  Claudia Folli; Alessia Levante; Riccardo Percudani; Davide Amidani; Stefania Bottazzi; Alberto Ferrari; Claudio Rivetti; Erasmo Neviani; Camilla Lazzi
Journal:  Sci Rep       Date:  2017-09-21       Impact factor: 4.379

7.  The Influence of Viable Cells and Cell-Free Extracts of Lactobacillus casei on Volatile Compounds and Polyphenolic Profile of Elderberry Juice.

Authors:  Annalisa Ricci; Alessia Levante; Martina Cirlini; Luca Calani; Valentina Bernini; Daniele Del Rio; Gianni Galaverna; Erasmo Neviani; Camilla Lazzi
Journal:  Front Microbiol       Date:  2018-11-20       Impact factor: 5.640

8.  Identification and first characterization of DinJ-YafQ toxin-antitoxin systems in Lactobacillus species of biotechnological interest.

Authors:  Alberto Ferrari; Stefano Maggi; Barbara Montanini; Alessia Levante; Camilla Lazzi; Yoshihiro Yamaguchi; Claudio Rivetti; Claudia Folli
Journal:  Sci Rep       Date:  2019-05-21       Impact factor: 4.379

9.  Complete genome sequence of Lactobacillus pentosus SLC13, isolated from mustard pickles, a potential probiotic strain with antimicrobial activity against foodborne pathogenic microorganisms.

Authors:  Min-Lang Huang; Jing-Yao Huang; Cheng-Yen Kao; Tony J Fang
Journal:  Gut Pathog       Date:  2018-01-18       Impact factor: 4.181

10.  Toxin-Antitoxin Systems: A Tool for Taxonomic Analysis of Human Intestinal Microbiota.

Authors:  Ksenia M Klimina; Viktoriya N Voroshilova; Elena U Poluektova; Vladimir A Veselovsky; Roman A Yunes; Aleksey S Kovtun; Anna V Kudryavtseva; Artem S Kasianov; Valery N Danilenko
Journal:  Toxins (Basel)       Date:  2020-06-12       Impact factor: 4.546

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