Literature DB >> 2372539

Dissociation constants for dihydrofolic acid and dihydrobiopterin and implications for mechanistic models for dihydrofolate reductase.

G Maharaj1, B S Selinsky, J R Appleman, M Perlman, R E London, R L Blakley.   

Abstract

The dissociation constants (pKa) for the pteridine ring system of dihydrofolate (H2folate) have been redetermined, and those for dihydrobiopterin (H2biopterin) have been determined. Determination of the pKa for N5 of H2folate is complicated by the low solubility and instability of H2folate at pH 2-4, and other complicating factors. The initial rate of absorbance change due to degradation is a maximum at pH 2.5, and the products depend on the oxygen concentration: under aerobic conditions, (p-aminobenzoyl)glutamic acid and 7,8-dihydropterin-6-carboxaldehyde are major products. H2Biopterin is much more soluble and more stable at low pH. For protonation of N5, the pKa is 2.56 +/- 0.01 for H2biopterin and 2.59 +/- 0.03 for H2folic acid. Spectrophotometric determination of the pKa for the N3-O4 amide group of H2folate is subject to serious errors when a wavelength between 220 and 235 nm is used. These errors arise from the pH-dependent absorbance of mercaptoethanol often present in the preparation. The amide group has a pKa of 10.41 +/- 0.04 in H2biopterin and 10.85 +/- 0.04 in H2folate. The redetermined value for the pKa of N5 of H2folate has implications for mechanistic models for dihydrofolate reductase, and revised kinetic constants have been calculated for one model.

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Year:  1990        PMID: 2372539     DOI: 10.1021/bi00471a008

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  13 in total

1.  Conformational change of the methionine 20 loop of Escherichia coli dihydrofolate reductase modulates pKa of the bound dihydrofolate.

Authors:  Ilja V Khavrutskii; Daniel J Price; Jinhyuk Lee; Charles L Brooks
Journal:  Protein Sci       Date:  2007-05-01       Impact factor: 6.725

2.  The role of the Met20 loop in the hydride transfer in Escherichia coli dihydrofolate reductase.

Authors:  Anil R Mhashal; Alexandra Vardi-Kilshtain; Amnon Kohen; Dan Thomas Major
Journal:  J Biol Chem       Date:  2017-06-15       Impact factor: 5.157

3.  Preliminary joint X-ray and neutron protein crystallographic studies of ecDHFR complexed with folate and NADP+.

Authors:  Qun Wan; Andrey Y Kovalevsky; Mark A Wilson; Brad C Bennett; Paul Langan; Chris Dealwis
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2014-05-25       Impact factor: 1.056

4.  Toward resolving the catalytic mechanism of dihydrofolate reductase using neutron and ultrahigh-resolution X-ray crystallography.

Authors:  Qun Wan; Brad C Bennett; Mark A Wilson; Andrey Kovalevsky; Paul Langan; Elizabeth E Howell; Chris Dealwis
Journal:  Proc Natl Acad Sci U S A       Date:  2014-12-01       Impact factor: 11.205

5.  Role of water in the catalytic cycle of E. coli dihydrofolate reductase.

Authors:  Paul Shrimpton; Rudolf K Allemann
Journal:  Protein Sci       Date:  2002-06       Impact factor: 6.725

6.  Modulating Enzyme Activity by Altering Protein Dynamics with Solvent.

Authors:  Michael R Duff; Jose M Borreguero; Matthew J Cuneo; Arvind Ramanathan; Junhong He; Ganesh Kamath; S Chakra Chennubhotla; Flora Meilleur; Elizabeth E Howell; Kenneth W Herwig; Dean A A Myles; Pratul K Agarwal
Journal:  Biochemistry       Date:  2018-07-06       Impact factor: 3.162

7.  Biochemical and structural studies of 6-carboxy-5,6,7,8-tetrahydropterin synthase reveal the molecular basis of catalytic promiscuity within the tunnel-fold superfamily.

Authors:  Zachary D Miles; Sue A Roberts; Reid M McCarty; Vahe Bandarian
Journal:  J Biol Chem       Date:  2014-07-02       Impact factor: 5.157

8.  Hydride transfer during catalysis by dihydrofolate reductase from Thermotoga maritima.

Authors:  Giovanni Maglia; Masood H Javed; Rudolf K Allemann
Journal:  Biochem J       Date:  2003-09-01       Impact factor: 3.857

9.  Crystal structure of a type II dihydrofolate reductase catalytic ternary complex.

Authors:  Joseph M Krahn; Michael R Jackson; Eugene F DeRose; Elizabeth E Howell; Robert E London
Journal:  Biochemistry       Date:  2007-12-04       Impact factor: 3.162

10.  Capturing the Catalytic Proton of Dihydrofolate Reductase: Implications for General Acid-Base Catalysis.

Authors:  Qun Wan; Brad C Bennett; Troy Wymore; Zhihong Li; Mark A Wilson; Charles L Brooks; Paul Langan; Andrey Kovalevsky; Chris G Dealwis
Journal:  ACS Catal       Date:  2021-04-28       Impact factor: 13.084

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