Literature DB >> 23725295

An overview of autophagy: morphology, mechanism, and regulation.

Katherine R Parzych1, Daniel J Klionsky.   

Abstract

SIGNIFICANCE: Autophagy is a highly conserved eukaryotic cellular recycling process. Through the degradation of cytoplasmic organelles, proteins, and macromolecules, and the recycling of the breakdown products, autophagy plays important roles in cell survival and maintenance. Accordingly, dysfunction of this process contributes to the pathologies of many human diseases. RECENT ADVANCES: Extensive research is currently being done to better understand the process of autophagy. In this review, we describe current knowledge of the morphology, molecular mechanism, and regulation of mammalian autophagy. CRITICAL ISSUES: At the mechanistic and regulatory levels, there are still many unanswered questions and points of confusion that have yet to be resolved. FUTURE DIRECTIONS: Through further research, a more complete and accurate picture of the molecular mechanism and regulation of autophagy will not only strengthen our understanding of this significant cellular process, but will aid in the development of new treatments for human diseases in which autophagy is not functioning properly.

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Mesh:

Year:  2013        PMID: 23725295      PMCID: PMC3894687          DOI: 10.1089/ars.2013.5371

Source DB:  PubMed          Journal:  Antioxid Redox Signal        ISSN: 1523-0864            Impact factor:   8.401


  163 in total

1.  Apg10p, a novel protein-conjugating enzyme essential for autophagy in yeast.

Authors:  T Shintani; N Mizushima; Y Ogawa; A Matsuura; T Noda; Y Ohsumi
Journal:  EMBO J       Date:  1999-10-01       Impact factor: 11.598

Review 2.  Protein turnover via autophagy: implications for metabolism.

Authors:  Noboru Mizushima; Daniel J Klionsky
Journal:  Annu Rev Nutr       Date:  2007       Impact factor: 11.848

Review 3.  Degradation of excess peroxisomes in mammalian liver cells by autophagy and other mechanisms.

Authors:  Sadaki Yokota; H Dariush Fahimi
Journal:  Histochem Cell Biol       Date:  2009-02-20       Impact factor: 4.304

Review 4.  Chaperone-mediated autophagy: molecular mechanisms and physiological relevance.

Authors:  Samantha J Orenstein; Ana Maria Cuervo
Journal:  Semin Cell Dev Biol       Date:  2010-02-20       Impact factor: 7.727

5.  Isolation and characterization of rat liver amphisomes. Evidence for fusion of autophagosomes with both early and late endosomes.

Authors:  T O Berg; M Fengsrud; P E Strømhaug; T Berg; P O Seglen
Journal:  J Biol Chem       Date:  1998-08-21       Impact factor: 5.157

6.  Deletion of the SNARE vti1b in mice results in the loss of a single SNARE partner, syntaxin 8.

Authors:  Vadim Atlashkin; Vera Kreykenbohm; Eeva-Liisa Eskelinen; Dirk Wenzel; Afshin Fayyazi; Gabriele Fischer von Mollard
Journal:  Mol Cell Biol       Date:  2003-08       Impact factor: 4.272

7.  A novel hypoxia-inducible factor-independent hypoxic response regulating mammalian target of rapamycin and its targets.

Authors:  Andrew M Arsham; Jessica J Howell; M Celeste Simon
Journal:  J Biol Chem       Date:  2003-05-30       Impact factor: 5.157

Review 8.  Regulation mechanisms and signaling pathways of autophagy.

Authors:  Congcong He; Daniel J Klionsky
Journal:  Annu Rev Genet       Date:  2009       Impact factor: 16.830

9.  Isolation of protein glycosylation mutants in the fission yeast Schizosaccharomyces pombe.

Authors:  K M Huang; M D Snider
Journal:  Mol Biol Cell       Date:  1995-05       Impact factor: 4.138

Review 10.  Autophagy: mechanism and physiological relevance 'brewed' from yeast studies.

Authors:  Rodney J Devenish; Daniel J Klionsky
Journal:  Front Biosci (Schol Ed)       Date:  2012-06-01
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  591 in total

1.  Long non-coding RNA HOTTIP affects renal cell carcinoma progression by regulating autophagy via the PI3K/Akt/Atg13 signaling pathway.

Authors:  Yang Su; Jingxiao Lu; Xianguo Chen; Chaozhao Liang; Pengcheng Luo; Cong Qin; Jie Zhang
Journal:  J Cancer Res Clin Oncol       Date:  2018-12-03       Impact factor: 4.553

2.  Time-course and intensity-based classifications of oxidative stresses and their potential application in biomedical, comparative and environmental research.

Authors:  Volodymyr I Lushchak
Journal:  Redox Rep       Date:  2016-02-05       Impact factor: 4.412

3.  Trehalose Inhibits Human Immunodeficiency Virus Type 1 Infection in Primary Human Macrophages and CD4+ T Lymphocytes through Two Distinct Mechanisms.

Authors:  Pratima Rawat; Simson Hon; Carmen Teodorof-Diedrich; Stephen A Spector
Journal:  J Virol       Date:  2020-08-17       Impact factor: 5.103

4.  Cantharidin suppresses cell growth and migration, and activates autophagy in human non-small cell lung cancer cells.

Authors:  Yan-Peng Liu; Ling Li; Liang Xu; E-Nuo Dai; Wei-Da Chen
Journal:  Oncol Lett       Date:  2018-03-01       Impact factor: 2.967

5.  Rph1/KDM4 mediates nutrient-limitation signaling that leads to the transcriptional induction of autophagy.

Authors:  Amélie Bernard; Meiyan Jin; Patricia González-Rodríguez; Jens Füllgrabe; Elizabeth Delorme-Axford; Steven K Backues; Bertrand Joseph; Daniel J Klionsky
Journal:  Curr Biol       Date:  2015-02-05       Impact factor: 10.834

6.  Cell biology: Molecular clearance at the cell's antenna.

Authors:  Valentina Cianfanelli; Francesco Cecconi
Journal:  Nature       Date:  2013-10-02       Impact factor: 49.962

7.  Triptolide induces autophagy and apoptosis through ERK activation in human breast cancer MCF-7 cells.

Authors:  Huan Gao; Yue Zhang; Lei Dong; Xiao-Yu Qu; Li-Na Tao; Yue-Ming Zhang; Jing-Hui Zhai; Yan-Qing Song
Journal:  Exp Ther Med       Date:  2018-02-01       Impact factor: 2.447

8.  The parasitophorous vacuole membrane of Toxoplasma gondii is targeted for disruption by ubiquitin-like conjugation systems of autophagy.

Authors:  Jayoung Choi; Sunmin Park; Scott B Biering; Elizabeth Selleck; Catherine Y Liu; Xin Zhang; Naonobu Fujita; Tatsuya Saitoh; Shizuo Akira; Tamotsu Yoshimori; L David Sibley; Seungmin Hwang; Herbert W Virgin
Journal:  Immunity       Date:  2014-06-12       Impact factor: 31.745

Review 9.  Whi2: a new player in amino acid sensing.

Authors:  Xinchen Teng; J Marie Hardwick
Journal:  Curr Genet       Date:  2019-01-30       Impact factor: 3.886

10.  As (and when) you like it: on-demand phospholipid synthesis drives phagophore expansion during autophagy.

Authors:  Shree Padma Metur; Daniel J Klionsky
Journal:  Autophagy       Date:  2020-02-25       Impact factor: 16.016

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