Literature DB >> 30701278

Whi2: a new player in amino acid sensing.

Xinchen Teng1,2, J Marie Hardwick3.   

Abstract

A critical function of human, yeast, and bacterial cells is the ability to sense and respond to available nutrients such as glucose and amino acids. Cells must also detect declining nutrient levels to adequately prepare for starvation conditions by inhibiting cell growth and activating autophagy. The evolutionarily conserved protein complex TORC1 regulates these cellular responses to nutrients, and in particular to amino acid availability. Recently, we found that yeast Whi2 (Saccharomyces cerevisiae) and a human counterpart, KCTD11, that shares a conserved BTB structural domain, are required to suppress TORC1 activity under low amino acid conditions. Using yeast, the mechanisms were more readily dissected. Unexpectedly, Whi2 suppresses TORC1 activity independently of the well-known SEACIT-GTR pathway, analogous to the GATOR1-RAG pathway in mammals. Instead, Whi2 requires the plasma membrane-associated phosphatases Psr1 and Psr2, which were known to bind Whi2, although their role was unknown. Yeast WHI2 was previously reported to be involved in regulating several fundamental cellular processes including cell cycle arrest, general stress responses, the Ras-cAMP-PKA pathway, autophagy, and mitophagy, and to be frequently mutated in the yeast knockout collections and in genome evolution studies. Most of these observations are likely explained by the ability of Whi2 to inhibit TORC1. Thus, understanding the function of yeast Whi2 will provide deeper insights into the disease-related KCTD family proteins and the pathogenesis of plant and human fungal infections.

Entities:  

Keywords:  Amino acid sensing; KCTD; KCTD11; RAG/GTR-independent; TORC1; Whi2

Mesh:

Substances:

Year:  2019        PMID: 30701278     DOI: 10.1007/s00294-018-00929-9

Source DB:  PubMed          Journal:  Curr Genet        ISSN: 0172-8083            Impact factor:   3.886


  67 in total

1.  The TOR signalling pathway controls nuclear localization of nutrient-regulated transcription factors.

Authors:  T Beck; M N Hall
Journal:  Nature       Date:  1999-12-09       Impact factor: 49.962

2.  Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry.

Authors:  Yuen Ho; Albrecht Gruhler; Adrian Heilbut; Gary D Bader; Lynda Moore; Sally-Lin Adams; Anna Millar; Paul Taylor; Keiryn Bennett; Kelly Boutilier; Lingyun Yang; Cheryl Wolting; Ian Donaldson; Søren Schandorff; Juanita Shewnarane; Mai Vo; Joanne Taggart; Marilyn Goudreault; Brenda Muskat; Cris Alfarano; Danielle Dewar; Zhen Lin; Katerina Michalickova; Andrew R Willems; Holly Sassi; Peter A Nielsen; Karina J Rasmussen; Jens R Andersen; Lene E Johansen; Lykke H Hansen; Hans Jespersen; Alexandre Podtelejnikov; Eva Nielsen; Janne Crawford; Vibeke Poulsen; Birgitte D Sørensen; Jesper Matthiesen; Ronald C Hendrickson; Frank Gleeson; Tony Pawson; Michael F Moran; Daniel Durocher; Matthias Mann; Christopher W V Hogue; Daniel Figeys; Mike Tyers
Journal:  Nature       Date:  2002-01-10       Impact factor: 49.962

3.  Psr1p/Psr2p, two plasma membrane phosphatases with an essential DXDX(T/V) motif required for sodium stress response in yeast.

Authors:  S Siniossoglou; E C Hurt; H R Pelham
Journal:  J Biol Chem       Date:  2000-06-23       Impact factor: 5.157

4.  FKBP12-rapamycin-associated protein associates with mitochondria and senses osmotic stress via mitochondrial dysfunction.

Authors:  Bimal N Desai; Benjamin R Myers; Stuart L Schreiber
Journal:  Proc Natl Acad Sci U S A       Date:  2002-04-02       Impact factor: 11.205

5.  Mitochondrial fission proteins regulate programmed cell death in yeast.

Authors:  Yihru Fannjiang; Wen-Chih Cheng; Sarah J Lee; Bing Qi; Jonathan Pevsner; J Michael McCaffery; R Blake Hill; Gorka Basañez; J Marie Hardwick
Journal:  Genes Dev       Date:  2004-11-01       Impact factor: 11.361

6.  A comprehensive two-hybrid analysis to explore the yeast protein interactome.

Authors:  T Ito; T Chiba; R Ozawa; M Yoshida; M Hattori; Y Sakaki
Journal:  Proc Natl Acad Sci U S A       Date:  2001-03-13       Impact factor: 11.205

7.  REN(KCTD11) is a suppressor of Hedgehog signaling and is deleted in human medulloblastoma.

Authors:  Lucia Di Marcotullio; Elisabetta Ferretti; Enrico De Smaele; Beatrice Argenti; Claudia Mincione; Francesca Zazzeroni; Rita Gallo; Laura Masuelli; Maddalena Napolitano; Marella Maroder; Andrea Modesti; Felice Giangaspero; Isabella Screpanti; Edoardo Alesse; Alberto Gulino
Journal:  Proc Natl Acad Sci U S A       Date:  2004-07-12       Impact factor: 11.205

8.  FKBP12-rapamycin-associated protein or mammalian target of rapamycin (FRAP/mTOR) localization in the endoplasmic reticulum and the Golgi apparatus.

Authors:  Ryan M Drenan; Xiangyu Liu; Paula G Bertram; X F Steven Zheng
Journal:  J Biol Chem       Date:  2003-10-24       Impact factor: 5.157

9.  Yeast Whi2 and Psr1-phosphatase form a complex and regulate STRE-mediated gene expression.

Authors:  Daisuke Kaida; Hideki Yashiroda; Akio Toh-e; Yoshiko Kikuchi
Journal:  Genes Cells       Date:  2002-06       Impact factor: 1.891

Review 10.  Chromosome 17p deletion in human medulloblastoma: a missing checkpoint in the Hedgehog pathway.

Authors:  Enrico De Smaele; Lucia Di Marcotullio; Elisabetta Ferretti; Isabella Screpanti; Edoardo Alesse; Alberto Gulino
Journal:  Cell Cycle       Date:  2004-10-03       Impact factor: 4.534

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  9 in total

1.  The Whi2p-Psr1p/Psr2p complex regulates interference competition and expansion of cells with competitive advantage in yeast colonies.

Authors:  Jana Maršíková; Martina Pavlíčková; Derek Wilkinson; Libuše Váchová; Otakar Hlaváček; Ladislava Hatáková; Zdena Palková
Journal:  Proc Natl Acad Sci U S A       Date:  2020-06-15       Impact factor: 11.205

Review 2.  KCTD: A new gene family involved in neurodevelopmental and neuropsychiatric disorders.

Authors:  Xinchen Teng; Abdel Aouacheria; Loïc Lionnard; Kyle A Metz; Lucian Soane; Atsushi Kamiya; J Marie Hardwick
Journal:  CNS Neurosci Ther       Date:  2019-07       Impact factor: 5.243

3.  Molecular basis of the scalp-ear-nipple syndrome unraveled by the characterization of disease-causing KCTD1 mutants.

Authors:  Giovanni Smaldone; Nicole Balasco; Luciano Pirone; Daniela Caruso; Sonia Di Gaetano; Emilia Maria Pedone; Luigi Vitagliano
Journal:  Sci Rep       Date:  2019-07-19       Impact factor: 4.379

4.  Unique genetic basis of the distinct antibiotic potency of high acetic acid production in the probiotic yeast Saccharomyces cerevisiae var. boulardii.

Authors:  Benjamin Offei; Paul Vandecruys; Stijn De Graeve; María R Foulquié-Moreno; Johan M Thevelein
Journal:  Genome Res       Date:  2019-09       Impact factor: 9.043

5.  Enhancing lifespan of budding yeast by pharmacological lowering of amino acid pools.

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Review 6.  SEA and GATOR 10 Years Later.

Authors:  Yahir A Loissell-Baltazar; Svetlana Dokudovskaya
Journal:  Cells       Date:  2021-10-08       Impact factor: 6.600

7.  Yeast cell death pathway requiring AP-3 vesicle trafficking leads to vacuole/lysosome membrane permeabilization.

Authors:  Zachary D Stolp; Madhura Kulkarni; Yining Liu; Chengzhang Zhu; Alizay Jalisi; Si Lin; Arturo Casadevall; Kyle W Cunningham; Fernando J Pineda; Xinchen Teng; J Marie Hardwick
Journal:  Cell Rep       Date:  2022-04-12       Impact factor: 9.995

8.  YPK9 and WHI2 Negatively Interact during Oxidative Stress.

Authors:  Florenal Joseph; Darach Miller; Oleg V Evgrafov; William J Chirico
Journal:  Microorganisms       Date:  2021-12-14

9.  Effects of abolishing Whi2 on the proteome and nitrogen catabolite repression-sensitive protein production.

Authors:  Jennifer J Tate; Jana Marsikova; Libuse Vachova; Zdena Palkova; Terrance G Cooper
Journal:  G3 (Bethesda)       Date:  2022-03-04       Impact factor: 3.542

  9 in total

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