| Literature DB >> 23723882 |
Abdul-Malek S Al-Tamimi1, Ahmed M Alafeefy, Ali A El-Emam, Seik Weng Ng, Edward R T Tiekink.
Abstract
In the title compound, C19H22FN3OS, the dihedral angle between the inclined oxa-diazole and benzene rings is 52.7 (3)°. In the crystal, helical supra-molecular chains along [100] are sustained by N-H⋯S hydrogen bonds supported by methyl-ene-benzene C-H⋯π inter-actions. The crystal studied was an inversion twin with the fractional contribution of the minor component being 0.33 (14).Entities:
Year: 2013 PMID: 23723882 PMCID: PMC3648262 DOI: 10.1107/S1600536813009823
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C19H22FN3OS | |
| Orthorhombic, | Mo |
| Hall symbol: P 2ac 2ab | Cell parameters from 1361 reflections |
| θ = 2.8–27.5° | |
| µ = 0.20 mm−1 | |
| Prism, colourless | |
| 0.30 × 0.10 × 0.10 mm |
| Agilent SuperNova Dual diffractometer with an Atlas detector | 3902 independent reflections |
| Radiation source: SuperNova (Mo) X-ray Source | 2177 reflections with |
| Mirror monochromator | |
| Detector resolution: 10.4041 pixels mm-1 | θmax = 27.6°, θmin = 3.0° |
| ω scan | |
| Absorption correction: multi-scan ( | |
| 7867 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max < 0.001 | |
| 3902 reflections | Δρmax = 0.26 e Å−3 |
| 231 parameters | Δρmin = −0.18 e Å−3 |
| 1 restraint | Absolute structure: Flack (1983), 1501 Friedel pairs |
| Primary atom site location: structure-invariant direct methods | Flack parameter: 0.67 (14) |
| Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
| Refinement. Refinement of |
| S1 | 0.06569 (15) | 0.33471 (10) | 0.03304 (5) | 0.0836 (4) | |
| F1 | −0.2851 (7) | −0.4312 (3) | 0.12970 (14) | 0.1582 (16) | |
| O1 | 0.3173 (4) | 0.2563 (2) | 0.10859 (11) | 0.0620 (6) | |
| N1 | 0.3424 (4) | 0.0519 (3) | 0.09315 (12) | 0.0587 (8) | |
| N2 | 0.2100 (4) | 0.1064 (3) | 0.05696 (13) | 0.0611 (8) | |
| N3 | −0.0577 (5) | −0.0053 (3) | 0.01856 (17) | 0.0778 (10) | |
| H3 | −0.147 (5) | 0.037 (4) | 0.0020 (17) | 0.098 (15)* | |
| C1 | 0.1962 (5) | 0.2294 (3) | 0.06489 (17) | 0.0612 (9) | |
| C2 | 0.4025 (5) | 0.1442 (3) | 0.12294 (15) | 0.0541 (8) | |
| C3 | 0.5497 (5) | 0.1445 (3) | 0.16727 (14) | 0.0511 (8) | |
| C4 | 0.7151 (6) | 0.2249 (4) | 0.14706 (16) | 0.0696 (11) | |
| H4A | 0.7643 | 0.1911 | 0.1119 | 0.083* | |
| H4B | 0.6736 | 0.3100 | 0.1400 | 0.083* | |
| C5 | 0.8671 (6) | 0.2249 (4) | 0.19230 (18) | 0.0777 (13) | |
| H5 | 0.9729 | 0.2756 | 0.1793 | 0.093* | |
| C6 | 0.7903 (7) | 0.2793 (4) | 0.24685 (19) | 0.0832 (13) | |
| H6A | 0.7476 | 0.3644 | 0.2403 | 0.100* | |
| H6B | 0.8879 | 0.2819 | 0.2753 | 0.100* | |
| C7 | 0.6290 (6) | 0.1993 (3) | 0.26791 (17) | 0.0675 (11) | |
| H7 | 0.5808 | 0.2339 | 0.3035 | 0.081* | |
| C8 | 0.4746 (5) | 0.1993 (3) | 0.22315 (15) | 0.0623 (10) | |
| H8A | 0.4311 | 0.2843 | 0.2169 | 0.075* | |
| H8B | 0.3701 | 0.1494 | 0.2363 | 0.075* | |
| C9 | 0.6160 (5) | 0.0102 (3) | 0.17771 (15) | 0.0592 (9) | |
| H9A | 0.5122 | −0.0409 | 0.1905 | 0.071* | |
| H9B | 0.6633 | −0.0255 | 0.1427 | 0.071* | |
| C10 | 0.7691 (6) | 0.0105 (4) | 0.22242 (17) | 0.0670 (11) | |
| H10 | 0.8114 | −0.0757 | 0.2290 | 0.080* | |
| C11 | 0.6935 (7) | 0.0645 (4) | 0.27741 (17) | 0.0738 (11) | |
| H11A | 0.7900 | 0.0627 | 0.3062 | 0.089* | |
| H11B | 0.5896 | 0.0140 | 0.2906 | 0.089* | |
| C12 | 0.9315 (6) | 0.0890 (5) | 0.2021 (2) | 0.0875 (13) | |
| H12A | 0.9801 | 0.0545 | 0.1670 | 0.105* | |
| H12B | 1.0304 | 0.0875 | 0.2301 | 0.105* | |
| C13 | 0.1279 (6) | 0.0329 (4) | 0.01020 (16) | 0.0736 (11) | |
| H13A | 0.1337 | 0.0827 | −0.0242 | 0.088* | |
| H13B | 0.2040 | −0.0412 | 0.0042 | 0.088* | |
| C14 | −0.1079 (6) | −0.1144 (3) | 0.04713 (15) | 0.0643 (10) | |
| C15 | −0.2947 (6) | −0.1525 (4) | 0.04433 (18) | 0.0758 (11) | |
| H15 | −0.3804 | −0.1057 | 0.0236 | 0.091* | |
| C16 | −0.3509 (9) | −0.2588 (5) | 0.0722 (2) | 0.0968 (16) | |
| H16 | −0.4748 | −0.2843 | 0.0704 | 0.116* | |
| C17 | −0.2266 (12) | −0.3262 (5) | 0.1021 (2) | 0.1003 (18) | |
| C18 | −0.0461 (10) | −0.2929 (5) | 0.1046 (2) | 0.1024 (17) | |
| H18 | 0.0378 | −0.3429 | 0.1245 | 0.123* | |
| C19 | 0.0173 (7) | −0.1844 (4) | 0.07792 (17) | 0.0835 (13) | |
| H19 | 0.1414 | −0.1598 | 0.0809 | 0.100* |
| S1 | 0.0517 (6) | 0.0873 (7) | 0.1118 (8) | 0.0022 (6) | −0.0058 (6) | 0.0342 (7) |
| F1 | 0.245 (5) | 0.104 (2) | 0.126 (2) | −0.040 (3) | 0.038 (3) | 0.021 (2) |
| O1 | 0.0485 (14) | 0.0574 (14) | 0.0800 (16) | −0.0034 (13) | −0.0044 (14) | 0.0029 (13) |
| N1 | 0.0481 (18) | 0.0599 (18) | 0.0681 (18) | −0.0007 (16) | −0.0024 (15) | 0.0012 (16) |
| N2 | 0.0510 (19) | 0.0658 (19) | 0.0666 (19) | −0.0018 (16) | −0.0026 (15) | 0.0062 (16) |
| N3 | 0.050 (2) | 0.075 (2) | 0.108 (3) | −0.003 (2) | −0.021 (2) | 0.013 (2) |
| C1 | 0.042 (2) | 0.069 (2) | 0.073 (2) | −0.006 (2) | 0.0028 (19) | 0.012 (2) |
| C2 | 0.0405 (19) | 0.0489 (19) | 0.073 (2) | 0.0026 (17) | 0.0036 (17) | 0.0031 (18) |
| C3 | 0.0438 (19) | 0.0481 (18) | 0.0613 (19) | −0.0078 (17) | −0.0004 (16) | −0.0019 (16) |
| C4 | 0.052 (2) | 0.079 (2) | 0.077 (2) | −0.019 (2) | 0.002 (2) | 0.007 (2) |
| C5 | 0.052 (2) | 0.098 (3) | 0.084 (3) | −0.029 (2) | 0.002 (2) | 0.010 (2) |
| C6 | 0.083 (3) | 0.070 (2) | 0.097 (3) | −0.023 (3) | −0.026 (3) | 0.001 (2) |
| C7 | 0.070 (3) | 0.064 (2) | 0.068 (2) | −0.015 (2) | 0.001 (2) | −0.014 (2) |
| C8 | 0.053 (2) | 0.057 (2) | 0.077 (2) | −0.0014 (19) | 0.0070 (19) | −0.006 (2) |
| C9 | 0.052 (2) | 0.056 (2) | 0.070 (2) | 0.0021 (18) | −0.0048 (18) | −0.0083 (17) |
| C10 | 0.057 (3) | 0.059 (2) | 0.086 (3) | 0.004 (2) | −0.012 (2) | −0.002 (2) |
| C11 | 0.073 (3) | 0.074 (3) | 0.075 (3) | −0.010 (2) | −0.007 (2) | 0.004 (2) |
| C12 | 0.048 (2) | 0.120 (4) | 0.095 (3) | 0.008 (3) | −0.001 (2) | −0.003 (3) |
| C13 | 0.076 (3) | 0.079 (3) | 0.067 (2) | −0.013 (2) | −0.011 (2) | 0.005 (2) |
| C14 | 0.067 (3) | 0.061 (2) | 0.065 (2) | −0.002 (2) | −0.004 (2) | −0.009 (2) |
| C15 | 0.070 (3) | 0.071 (2) | 0.086 (3) | −0.006 (2) | 0.001 (2) | −0.019 (2) |
| C16 | 0.105 (4) | 0.086 (3) | 0.099 (4) | −0.024 (3) | 0.021 (3) | −0.024 (3) |
| C17 | 0.158 (6) | 0.072 (3) | 0.071 (3) | −0.020 (4) | 0.014 (4) | −0.001 (3) |
| C18 | 0.138 (5) | 0.086 (3) | 0.083 (3) | 0.003 (4) | −0.027 (3) | 0.012 (3) |
| C19 | 0.086 (3) | 0.084 (3) | 0.080 (3) | 0.000 (3) | −0.025 (2) | 0.007 (3) |
| S1—C1 | 1.643 (4) | C7—H7 | 0.9800 |
| F1—C17 | 1.361 (5) | C8—H8A | 0.9700 |
| O1—C1 | 1.378 (5) | C8—H8B | 0.9700 |
| O1—C2 | 1.385 (4) | C9—C10 | 1.522 (5) |
| N1—C2 | 1.283 (4) | C9—H9A | 0.9700 |
| N1—N2 | 1.402 (4) | C9—H9B | 0.9700 |
| N2—C1 | 1.328 (5) | C10—C12 | 1.512 (6) |
| N2—C13 | 1.476 (5) | C10—C11 | 1.519 (5) |
| N3—C14 | 1.392 (5) | C10—H10 | 0.9800 |
| N3—C13 | 1.406 (5) | C11—H11A | 0.9700 |
| N3—H3 | 0.874 (19) | C11—H11B | 0.9700 |
| C2—C3 | 1.486 (5) | C12—H12A | 0.9700 |
| C3—C9 | 1.529 (5) | C12—H12B | 0.9700 |
| C3—C4 | 1.538 (5) | C13—H13A | 0.9700 |
| C3—C8 | 1.539 (5) | C13—H13B | 0.9700 |
| C4—C5 | 1.526 (6) | C14—C19 | 1.374 (5) |
| C4—H4A | 0.9700 | C14—C15 | 1.401 (6) |
| C4—H4B | 0.9700 | C15—C16 | 1.371 (6) |
| C5—C6 | 1.515 (6) | C15—H15 | 0.9300 |
| C5—C12 | 1.538 (6) | C16—C17 | 1.345 (8) |
| C5—H5 | 0.9800 | C16—H16 | 0.9300 |
| C6—C7 | 1.521 (6) | C17—C18 | 1.343 (8) |
| C6—H6A | 0.9700 | C18—C19 | 1.394 (6) |
| C6—H6B | 0.9700 | C18—H18 | 0.9300 |
| C7—C11 | 1.526 (5) | C19—H19 | 0.9300 |
| C7—C8 | 1.530 (5) | ||
| C1—O1—C2 | 106.3 (3) | H8A—C8—H8B | 108.2 |
| C2—N1—N2 | 104.1 (3) | C10—C9—C3 | 109.5 (3) |
| C1—N2—N1 | 112.0 (3) | C10—C9—H9A | 109.8 |
| C1—N2—C13 | 126.8 (3) | C3—C9—H9A | 109.8 |
| N1—N2—C13 | 120.3 (3) | C10—C9—H9B | 109.8 |
| C14—N3—C13 | 123.7 (4) | C3—C9—H9B | 109.8 |
| C14—N3—H3 | 117 (3) | H9A—C9—H9B | 108.2 |
| C13—N3—H3 | 119 (3) | C12—C10—C9 | 109.7 (3) |
| N2—C1—O1 | 105.3 (3) | C12—C10—C11 | 109.6 (3) |
| N2—C1—S1 | 130.8 (3) | C9—C10—C11 | 109.6 (3) |
| O1—C1—S1 | 123.9 (3) | C12—C10—H10 | 109.3 |
| N1—C2—O1 | 112.3 (3) | C9—C10—H10 | 109.3 |
| N1—C2—C3 | 128.7 (3) | C11—C10—H10 | 109.3 |
| O1—C2—C3 | 118.9 (3) | C10—C11—C7 | 109.8 (3) |
| C2—C3—C9 | 109.4 (3) | C10—C11—H11A | 109.7 |
| C2—C3—C4 | 109.3 (3) | C7—C11—H11A | 109.7 |
| C9—C3—C4 | 109.4 (3) | C10—C11—H11B | 109.7 |
| C2—C3—C8 | 110.8 (3) | C7—C11—H11B | 109.7 |
| C9—C3—C8 | 109.0 (3) | H11A—C11—H11B | 108.2 |
| C4—C3—C8 | 108.9 (3) | C10—C12—C5 | 109.8 (3) |
| C5—C4—C3 | 109.5 (3) | C10—C12—H12A | 109.7 |
| C5—C4—H4A | 109.8 | C5—C12—H12A | 109.7 |
| C3—C4—H4A | 109.8 | C10—C12—H12B | 109.7 |
| C5—C4—H4B | 109.8 | C5—C12—H12B | 109.7 |
| C3—C4—H4B | 109.8 | H12A—C12—H12B | 108.2 |
| H4A—C4—H4B | 108.2 | N3—C13—N2 | 115.2 (3) |
| C6—C5—C4 | 109.6 (4) | N3—C13—H13A | 108.5 |
| C6—C5—C12 | 110.0 (4) | N2—C13—H13A | 108.5 |
| C4—C5—C12 | 108.6 (4) | N3—C13—H13B | 108.5 |
| C6—C5—H5 | 109.6 | N2—C13—H13B | 108.5 |
| C4—C5—H5 | 109.6 | H13A—C13—H13B | 107.5 |
| C12—C5—H5 | 109.6 | C19—C14—N3 | 122.8 (4) |
| C5—C6—C7 | 109.8 (3) | C19—C14—C15 | 119.5 (4) |
| C5—C6—H6A | 109.7 | N3—C14—C15 | 117.8 (4) |
| C7—C6—H6A | 109.7 | C16—C15—C14 | 119.8 (5) |
| C5—C6—H6B | 109.7 | C16—C15—H15 | 120.1 |
| C7—C6—H6B | 109.7 | C14—C15—H15 | 120.1 |
| H6A—C6—H6B | 108.2 | C17—C16—C15 | 119.9 (5) |
| C6—C7—C11 | 110.3 (4) | C17—C16—H16 | 120.0 |
| C6—C7—C8 | 108.9 (3) | C15—C16—H16 | 120.0 |
| C11—C7—C8 | 108.7 (3) | C18—C17—C16 | 121.3 (5) |
| C6—C7—H7 | 109.6 | C18—C17—F1 | 119.6 (7) |
| C11—C7—H7 | 109.6 | C16—C17—F1 | 119.1 (7) |
| C8—C7—H7 | 109.6 | C17—C18—C19 | 120.9 (5) |
| C7—C8—C3 | 109.7 (3) | C17—C18—H18 | 119.6 |
| C7—C8—H8A | 109.7 | C19—C18—H18 | 119.6 |
| C3—C8—H8A | 109.7 | C14—C19—C18 | 118.5 (5) |
| C7—C8—H8B | 109.7 | C14—C19—H19 | 120.8 |
| C3—C8—H8B | 109.7 | C18—C19—H19 | 120.8 |
| C2—N1—N2—C1 | 1.2 (4) | C9—C3—C8—C7 | 59.9 (4) |
| C2—N1—N2—C13 | 171.3 (3) | C4—C3—C8—C7 | −59.4 (4) |
| N1—N2—C1—O1 | −2.0 (4) | C2—C3—C9—C10 | 179.1 (3) |
| C13—N2—C1—O1 | −171.3 (3) | C4—C3—C9—C10 | 59.4 (4) |
| N1—N2—C1—S1 | 179.0 (3) | C8—C3—C9—C10 | −59.6 (4) |
| C13—N2—C1—S1 | 9.8 (6) | C3—C9—C10—C12 | −60.1 (4) |
| C2—O1—C1—N2 | 2.0 (4) | C3—C9—C10—C11 | 60.3 (4) |
| C2—O1—C1—S1 | −179.0 (3) | C12—C10—C11—C7 | 59.6 (4) |
| N2—N1—C2—O1 | 0.1 (4) | C9—C10—C11—C7 | −60.8 (4) |
| N2—N1—C2—C3 | −177.7 (3) | C6—C7—C11—C10 | −59.0 (4) |
| C1—O1—C2—N1 | −1.3 (4) | C8—C7—C11—C10 | 60.4 (4) |
| C1—O1—C2—C3 | 176.7 (3) | C9—C10—C12—C5 | 60.8 (4) |
| N1—C2—C3—C9 | −5.0 (5) | C11—C10—C12—C5 | −59.5 (5) |
| O1—C2—C3—C9 | 177.4 (3) | C6—C5—C12—C10 | 59.2 (5) |
| N1—C2—C3—C4 | 114.8 (4) | C4—C5—C12—C10 | −60.7 (5) |
| O1—C2—C3—C4 | −62.9 (4) | C14—N3—C13—N2 | −86.1 (5) |
| N1—C2—C3—C8 | −125.2 (4) | C1—N2—C13—N3 | −85.2 (5) |
| O1—C2—C3—C8 | 57.1 (4) | N1—N2—C13—N3 | 106.3 (4) |
| C2—C3—C4—C5 | −179.7 (3) | C13—N3—C14—C19 | 11.1 (6) |
| C9—C3—C4—C5 | −59.9 (4) | C13—N3—C14—C15 | −169.5 (4) |
| C8—C3—C4—C5 | 59.1 (4) | C19—C14—C15—C16 | −0.1 (6) |
| C3—C4—C5—C6 | −60.2 (4) | N3—C14—C15—C16 | −179.5 (4) |
| C3—C4—C5—C12 | 60.0 (4) | C14—C15—C16—C17 | 0.0 (6) |
| C4—C5—C6—C7 | 61.1 (5) | C15—C16—C17—C18 | −1.2 (7) |
| C12—C5—C6—C7 | −58.2 (5) | C15—C16—C17—F1 | 179.7 (4) |
| C5—C6—C7—C11 | 58.3 (5) | C16—C17—C18—C19 | 2.4 (8) |
| C5—C6—C7—C8 | −60.9 (4) | F1—C17—C18—C19 | −178.5 (4) |
| C6—C7—C8—C3 | 60.2 (4) | N3—C14—C19—C18 | −179.4 (4) |
| C11—C7—C8—C3 | −60.0 (4) | C15—C14—C19—C18 | 1.2 (6) |
| C2—C3—C8—C7 | −179.7 (3) | C17—C18—C19—C14 | −2.4 (7) |
| H··· | ||||
| N3—H3···S1i | 0.87 (2) | 2.61 (2) | 3.475 (4) | 172 (4) |
| C9—H9 | 0.97 | 2.90 | 3.800 (5) | 154 |
Hydrogen-bond geometry (Å, °)
Cg1 is the centroid of the C14–C19 ring.
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N3—H3⋯S1i | 0.87 (2) | 2.61 (2) | 3.475 (4) | 172 (4) |
| C9—H9 | 0.97 | 2.90 | 3.800 (5) | 154 |
Symmetry codes: (i) ; (ii) .