| Literature DB >> 23723861 |
R Selvakumar1, M Bakthadoss, S Vijayakumar, S Murugavel.
Abstract
In the title compound, C18H17NO3S, the thia-zepine ring adopts a slightly distorted twist-boat conformation. The dihedral angle between the mean plane of the benzo-thia-zepin ring system and the benzene ring is 60.3 (1)°. In the crystal, mol-ecules are linked by two pairs of inversion-related N-H⋯O and C-H⋯O hydrogen bonds, generating alternating R 2 (2)(8) and R 2 (2)(6) ring motifs, respectively, in a zigzag supra-molecular chain that runs along the c axis. These chains stack along the a axis via S⋯C [3.424 (2) Å] contacts. A three-dimensional supra-molecular network is consolidated by C-H⋯π and π-π inter-actions [inter-centroid distance between di-meth-oxy-benzene rings = 3.815 (1) Å]. The crystal studied was a non-merohedral twin, with a refined value of the minor twin fraction of 0.2477 (6) .Entities:
Year: 2013 PMID: 23723861 PMCID: PMC3648241 DOI: 10.1107/S1600536813009598
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C18H17NO3S | |
| Orthorhombic, | Mo |
| Hall symbol: -P 2n 2ab | Cell parameters from 2790 reflections |
| θ = 2.2–24.9° | |
| µ = 0.22 mm−1 | |
| Block, colourless | |
| 0.35 × 0.20 × 0.15 mm |
| Bruker APEXII CCD diffractometer | 13227 independent reflections |
| Radiation source: fine-focus sealed tube | 8413 reflections with |
| Graphite monochromator | |
| Detector resolution: 10.0 pixels mm-1 | θmax = 24.9°, θmin = 2.2° |
| ω scans | |
| Absorption correction: multi-scan (TWINABS; Sheldrick, 1997) | |
| 13227 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 13227 reflections | (Δ/σ)max = 0.001 |
| 211 parameters | Δρmax = 0.25 e Å−3 |
| 0 restraints | Δρmin = −0.33 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C2 | 0.21158 (10) | 0.01584 (18) | 1.02679 (11) | 0.0320 (5) | |
| C3 | 0.26554 (10) | 0.0619 (2) | 1.07376 (13) | 0.0401 (5) | |
| H3 | 0.3072 | 0.0225 | 1.0683 | 0.048* | |
| C4 | 0.25791 (10) | 0.1650 (2) | 1.12822 (13) | 0.0434 (6) | |
| H4 | 0.2939 | 0.1935 | 1.1611 | 0.052* | |
| C5 | 0.19688 (11) | 0.2264 (2) | 1.13416 (12) | 0.0405 (5) | |
| H5 | 0.1921 | 0.2978 | 1.1700 | 0.049* | |
| C6 | 0.14302 (10) | 0.18270 (19) | 1.08740 (11) | 0.0339 (5) | |
| H6 | 0.1020 | 0.2249 | 1.0913 | 0.041* | |
| C7 | 0.14978 (9) | 0.07580 (18) | 1.03449 (10) | 0.0265 (4) | |
| C8 | 0.07914 (10) | −0.00895 (17) | 0.91369 (11) | 0.0300 (5) | |
| C9 | 0.13353 (9) | −0.00907 (17) | 0.84820 (11) | 0.0277 (5) | |
| C1 | 0.19328 (11) | −0.05969 (19) | 0.86307 (11) | 0.0359 (5) | |
| H1 | 0.2230 | −0.0622 | 0.8170 | 0.043* | |
| C10 | 0.11450 (10) | 0.04089 (18) | 0.76116 (11) | 0.0332 (5) | |
| H10A | 0.0735 | −0.0016 | 0.7432 | 0.040* | |
| H10B | 0.1493 | 0.0170 | 0.7206 | 0.040* | |
| C11 | 0.10408 (8) | 0.18544 (17) | 0.75624 (10) | 0.0267 (4) | |
| C12 | 0.12408 (10) | 0.2698 (2) | 0.81859 (11) | 0.0369 (5) | |
| H12 | 0.1440 | 0.2384 | 0.8685 | 0.044* | |
| C13 | 0.11523 (10) | 0.4015 (2) | 0.80865 (12) | 0.0406 (5) | |
| H13 | 0.1286 | 0.4574 | 0.8522 | 0.049* | |
| C14 | 0.08704 (10) | 0.45013 (18) | 0.73534 (12) | 0.0345 (5) | |
| C15 | 0.06728 (9) | 0.36546 (19) | 0.67025 (11) | 0.0305 (5) | |
| C16 | 0.07503 (9) | 0.23488 (19) | 0.68158 (10) | 0.0298 (5) | |
| H16 | 0.0607 | 0.1785 | 0.6388 | 0.036* | |
| C18 | 0.02274 (13) | 0.3361 (2) | 0.52964 (13) | 0.0661 (8) | |
| H18A | 0.0616 | 0.2902 | 0.5099 | 0.099* | |
| H18B | 0.0042 | 0.3852 | 0.4830 | 0.099* | |
| H18C | −0.0100 | 0.2756 | 0.5502 | 0.099* | |
| C17 | 0.08134 (13) | 0.6638 (2) | 0.78994 (14) | 0.0715 (8) | |
| H17A | 0.0536 | 0.6325 | 0.8359 | 0.107* | |
| H17B | 0.0665 | 0.7483 | 0.7730 | 0.107* | |
| H17C | 0.1270 | 0.6684 | 0.8091 | 0.107* | |
| N1 | 0.09093 (8) | 0.02648 (15) | 0.99504 (9) | 0.0325 (4) | |
| H1A | 0.0573 | 0.0180 | 1.0291 | 0.039* | |
| O1 | 0.02201 (7) | −0.04165 (14) | 0.89186 (8) | 0.0423 (4) | |
| O3 | 0.04118 (7) | 0.42072 (13) | 0.59744 (8) | 0.0462 (4) | |
| O2 | 0.07680 (8) | 0.57865 (13) | 0.71876 (9) | 0.0498 (4) | |
| S1 | 0.22192 (3) | −0.12256 (6) | 0.96130 (3) | 0.04692 (18) |
| C2 | 0.0340 (13) | 0.0353 (12) | 0.0267 (10) | 0.0018 (10) | −0.0032 (9) | 0.0069 (9) |
| C3 | 0.0285 (13) | 0.0482 (15) | 0.0437 (12) | 0.0032 (10) | −0.0051 (9) | 0.0068 (11) |
| C4 | 0.0369 (15) | 0.0530 (15) | 0.0404 (12) | −0.0140 (12) | −0.0120 (10) | 0.0064 (11) |
| C5 | 0.0447 (14) | 0.0402 (13) | 0.0366 (11) | −0.0090 (11) | −0.0044 (10) | −0.0018 (10) |
| C6 | 0.0347 (13) | 0.0359 (13) | 0.0311 (10) | −0.0005 (10) | 0.0000 (9) | 0.0014 (9) |
| C7 | 0.0256 (12) | 0.0326 (12) | 0.0214 (9) | −0.0028 (9) | −0.0011 (8) | 0.0067 (9) |
| C8 | 0.0302 (13) | 0.0278 (12) | 0.0320 (10) | 0.0017 (9) | −0.0025 (9) | 0.0044 (9) |
| C9 | 0.0310 (12) | 0.0249 (11) | 0.0271 (9) | 0.0008 (9) | −0.0016 (8) | −0.0015 (8) |
| C1 | 0.0391 (14) | 0.0386 (13) | 0.0300 (10) | 0.0034 (10) | 0.0048 (9) | −0.0031 (9) |
| C10 | 0.0394 (13) | 0.0351 (12) | 0.0252 (9) | −0.0004 (9) | 0.0006 (8) | −0.0022 (9) |
| C11 | 0.0263 (12) | 0.0297 (11) | 0.0242 (9) | −0.0046 (9) | 0.0029 (8) | 0.0008 (9) |
| C12 | 0.0463 (14) | 0.0395 (13) | 0.0248 (10) | −0.0052 (11) | −0.0030 (9) | −0.0008 (9) |
| C13 | 0.0524 (15) | 0.0357 (14) | 0.0336 (11) | −0.0129 (11) | 0.0002 (10) | −0.0083 (10) |
| C14 | 0.0406 (14) | 0.0246 (12) | 0.0384 (11) | −0.0057 (9) | 0.0126 (10) | −0.0006 (10) |
| C15 | 0.0324 (13) | 0.0324 (12) | 0.0265 (10) | 0.0009 (9) | 0.0052 (8) | 0.0046 (9) |
| C16 | 0.0319 (13) | 0.0310 (12) | 0.0263 (10) | −0.0039 (9) | 0.0006 (8) | −0.0034 (9) |
| C18 | 0.111 (2) | 0.0510 (16) | 0.0358 (13) | 0.0186 (15) | −0.0196 (13) | −0.0014 (11) |
| C17 | 0.118 (2) | 0.0342 (15) | 0.0621 (16) | −0.0121 (15) | 0.0208 (15) | −0.0165 (13) |
| N1 | 0.0229 (10) | 0.0474 (11) | 0.0273 (8) | −0.0062 (8) | 0.0031 (7) | 0.0024 (8) |
| O1 | 0.0294 (9) | 0.0628 (10) | 0.0346 (7) | −0.0108 (7) | −0.0031 (6) | −0.0053 (7) |
| O3 | 0.0675 (11) | 0.0373 (9) | 0.0338 (8) | 0.0099 (7) | −0.0051 (7) | 0.0047 (7) |
| O2 | 0.0797 (12) | 0.0244 (8) | 0.0452 (8) | −0.0014 (8) | 0.0113 (8) | −0.0036 (7) |
| S1 | 0.0543 (4) | 0.0454 (4) | 0.0411 (3) | 0.0223 (3) | −0.0086 (3) | 0.0000 (3) |
| C2—C3 | 1.386 (3) | C10—H10B | 0.9700 |
| C2—C7 | 1.386 (2) | C11—C12 | 1.364 (2) |
| C2—S1 | 1.770 (2) | C11—C16 | 1.394 (2) |
| C3—C4 | 1.371 (3) | C12—C13 | 1.383 (3) |
| C3—H3 | 0.9300 | C12—H12 | 0.9300 |
| C4—C5 | 1.377 (3) | C13—C14 | 1.367 (3) |
| C4—H4 | 0.9300 | C13—H13 | 0.9300 |
| C5—C6 | 1.374 (3) | C14—O2 | 1.371 (2) |
| C5—H5 | 0.9300 | C14—C15 | 1.395 (3) |
| C6—C7 | 1.385 (3) | C15—O3 | 1.370 (2) |
| C6—H6 | 0.9300 | C15—C16 | 1.372 (3) |
| C7—N1 | 1.420 (2) | C16—H16 | 0.9300 |
| C8—O1 | 1.237 (2) | C18—O3 | 1.419 (2) |
| C8—N1 | 1.337 (2) | C18—H18A | 0.9600 |
| C8—C9 | 1.488 (3) | C18—H18B | 0.9600 |
| C9—C1 | 1.323 (3) | C18—H18C | 0.9600 |
| C9—C10 | 1.497 (2) | C17—O2 | 1.417 (2) |
| C1—S1 | 1.7549 (19) | C17—H17A | 0.9600 |
| C1—H1 | 0.9300 | C17—H17B | 0.9600 |
| C10—C11 | 1.513 (2) | C17—H17C | 0.9600 |
| C10—H10A | 0.9700 | N1—H1A | 0.8600 |
| C3—C2—C7 | 119.50 (18) | C16—C11—C10 | 117.55 (16) |
| C3—C2—S1 | 119.38 (16) | C11—C12—C13 | 120.97 (18) |
| C7—C2—S1 | 121.07 (14) | C11—C12—H12 | 119.5 |
| C4—C3—C2 | 120.44 (19) | C13—C12—H12 | 119.5 |
| C4—C3—H3 | 119.8 | C14—C13—C12 | 120.58 (18) |
| C2—C3—H3 | 119.8 | C14—C13—H13 | 119.7 |
| C3—C4—C5 | 119.93 (19) | C12—C13—H13 | 119.7 |
| C3—C4—H4 | 120.0 | C13—C14—O2 | 125.16 (17) |
| C5—C4—H4 | 120.0 | C13—C14—C15 | 119.27 (18) |
| C6—C5—C4 | 120.3 (2) | O2—C14—C15 | 115.57 (17) |
| C6—C5—H5 | 119.8 | O3—C15—C16 | 124.07 (17) |
| C4—C5—H5 | 119.8 | O3—C15—C14 | 116.31 (17) |
| C5—C6—C7 | 120.03 (19) | C16—C15—C14 | 119.61 (17) |
| C5—C6—H6 | 120.0 | C15—C16—C11 | 121.03 (17) |
| C7—C6—H6 | 120.0 | C15—C16—H16 | 119.5 |
| C6—C7—C2 | 119.72 (17) | C11—C16—H16 | 119.5 |
| C6—C7—N1 | 117.57 (17) | O3—C18—H18A | 109.5 |
| C2—C7—N1 | 122.54 (17) | O3—C18—H18B | 109.5 |
| O1—C8—N1 | 119.77 (17) | H18A—C18—H18B | 109.5 |
| O1—C8—C9 | 119.02 (17) | O3—C18—H18C | 109.5 |
| N1—C8—C9 | 121.21 (18) | H18A—C18—H18C | 109.5 |
| C1—C9—C8 | 122.60 (17) | H18B—C18—H18C | 109.5 |
| C1—C9—C10 | 121.56 (17) | O2—C17—H17A | 109.5 |
| C8—C9—C10 | 115.60 (16) | O2—C17—H17B | 109.5 |
| C9—C1—S1 | 126.33 (15) | H17A—C17—H17B | 109.5 |
| C9—C1—H1 | 116.8 | O2—C17—H17C | 109.5 |
| S1—C1—H1 | 116.8 | H17A—C17—H17C | 109.5 |
| C9—C10—C11 | 114.99 (15) | H17B—C17—H17C | 109.5 |
| C9—C10—H10A | 108.5 | C8—N1—C7 | 130.72 (16) |
| C11—C10—H10A | 108.5 | C8—N1—H1A | 114.6 |
| C9—C10—H10B | 108.5 | C7—N1—H1A | 114.6 |
| C11—C10—H10B | 108.5 | C15—O3—C18 | 116.96 (16) |
| H10A—C10—H10B | 107.5 | C14—O2—C17 | 116.60 (16) |
| C12—C11—C16 | 118.50 (17) | C1—S1—C2 | 99.30 (9) |
| C12—C11—C10 | 123.88 (16) | ||
| C7—C2—C3—C4 | 0.7 (3) | C11—C12—C13—C14 | −1.0 (3) |
| S1—C2—C3—C4 | −176.75 (15) | C12—C13—C14—O2 | −179.20 (17) |
| C2—C3—C4—C5 | −2.3 (3) | C12—C13—C14—C15 | −0.1 (3) |
| C3—C4—C5—C6 | 1.7 (3) | C13—C14—C15—O3 | −178.15 (17) |
| C4—C5—C6—C7 | 0.5 (3) | O2—C14—C15—O3 | 1.0 (2) |
| C5—C6—C7—C2 | −2.1 (3) | C13—C14—C15—C16 | 1.5 (3) |
| C5—C6—C7—N1 | 173.30 (16) | O2—C14—C15—C16 | −179.36 (16) |
| C3—C2—C7—C6 | 1.5 (3) | O3—C15—C16—C11 | 177.80 (17) |
| S1—C2—C7—C6 | 178.92 (13) | C14—C15—C16—C11 | −1.8 (3) |
| C3—C2—C7—N1 | −173.68 (16) | C12—C11—C16—C15 | 0.7 (3) |
| S1—C2—C7—N1 | 3.7 (2) | C10—C11—C16—C15 | −176.41 (16) |
| O1—C8—C9—C1 | −133.7 (2) | O1—C8—N1—C7 | −175.13 (18) |
| N1—C8—C9—C1 | 46.7 (3) | C9—C8—N1—C7 | 4.5 (3) |
| O1—C8—C9—C10 | 40.8 (2) | C6—C7—N1—C8 | 133.3 (2) |
| N1—C8—C9—C10 | −138.76 (18) | C2—C7—N1—C8 | −51.4 (3) |
| C8—C9—C1—S1 | −5.3 (3) | C16—C15—O3—C18 | −1.4 (3) |
| C10—C9—C1—S1 | −179.56 (14) | C14—C15—O3—C18 | 178.15 (18) |
| C1—C9—C10—C11 | −113.1 (2) | C13—C14—O2—C17 | −15.3 (3) |
| C8—C9—C10—C11 | 72.2 (2) | C15—C14—O2—C17 | 165.61 (18) |
| C9—C10—C11—C12 | 14.1 (3) | C9—C1—S1—C2 | −58.0 (2) |
| C9—C10—C11—C16 | −168.94 (16) | C3—C2—S1—C1 | −125.91 (16) |
| C16—C11—C12—C13 | 0.7 (3) | C7—C2—S1—C1 | 56.68 (17) |
| C10—C11—C12—C13 | 177.59 (18) |
| H··· | ||||
| N1—H1 | 0.86 | 2.02 | 2.863 (2) | 167 |
| C18—H18 | 0.96 | 2.53 | 3.445 (3) | 159 |
| C4—H4··· | 0.93 | 2.57 | 3.450 (2) | 158 |
| C10—H10 | 0.97 | 2.82 | 3.725 (2) | 155 |
Hydrogen-bond geometry (Å, °)
Cg1 and Cg2 are the centroids of the C11–C16 and C2–C7 rings, respectively.
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N1—H1 | 0.86 | 2.02 | 2.863 (2) | 167 |
| C18—H18 | 0.96 | 2.53 | 3.445 (3) | 159 |
| C4—H4⋯ | 0.93 | 2.57 | 3.450 (2) | 158 |
| C10—H10 | 0.97 | 2.82 | 3.725 (2) | 155 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .