Literature DB >> 23723846

4-(4-Fluoro-phen-yl)-6-methyl-amino-5-nitro-2-phenyl-4H-pyran-3-carbo-nitrile.

R Vishnupriya1, J Suresh, S Sivakumar, R Ranjith Kumar, P L Nilantha Lakshman.   

Abstract

In the title compound, C19H14FN3O3, the central pyran ring adopts a boat conformation with the O atom and the quaternary C atom diagonally opposite displaced by 0.068 (1) and 0.075 (1) Å, respectively, above the mean plane defined by the other four ring atoms. The co-planar atoms of the pyran ring and the fluoro-phenyl ring are nearly perpendicular, as evidenced by the dihedral angle of 87.11 (1)°. The amine group forms an intra-molecular N-H⋯O(nitro) hydrogen bond. In the crystal, mol-ecules are linked into parallel chains along [100] by weak N-H⋯N and C-H⋯N(nitro) hydrogen bonds, generating C(8) and C(9) graph-set motifs, respectively.

Entities:  

Year:  2013        PMID: 23723846      PMCID: PMC3647880          DOI: 10.1107/S1600536813009008

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activity of substituted pyran derivatives, see: Lokaj et al. (1990 ▶); Marco et al. (1993 ▶). Some 4H-pyran derivatives are potential bioactive compounds and can be used as calcium antagonists, see: Suárez et al. (2002 ▶). For hydrogen-bonding graph-set motifs, see: Bernstein et al. (1995 ▶). For ring conformation analysis, see: Cremer & Pople (1975 ▶). The title compound and some related compounds are widely used as organic inter­mediates in organic chemistry (Liang et al., 2009 ▶). For related structures, see: Nesterov et al. (2004 ▶); Nesterov & Viltchinskaia (2001 ▶). For a description of the Cambridge Structural Database, see: Allen (2002 ▶). For standard bond lengths, see: Allen et al. (1987 ▶).

Experimental

Crystal data

C19H14FN3O3 M = 351.33 Triclinic, a = 9.3898 (3) Å b = 9.9752 (3) Å c = 11.1324 (3) Å α = 98.765 (1)° β = 113.991 (1)° γ = 109.520 (1)° V = 846.09 (4) Å3 Z = 2 Mo Kα radiation μ = 0.10 mm−1 T = 293 K 0.23 × 0.20 × 0.19 mm

Data collection

Bruker Kappa APEXII diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.967, T max = 0.974 16948 measured reflections 3680 independent reflections 2993 reflections with I > 2σ(I) R int = 0.026

Refinement

R[F 2 > 2σ(F 2)] = 0.040 wR(F 2) = 0.118 S = 1.06 3680 reflections 236 parameters H-atom parameters constrained Δρmax = 0.24 e Å−3 Δρmin = −0.22 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: SAINT (Bruker, 2004 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2009 ▶); software used to prepare material for publication: SHELXL97. Click here for additional data file. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536813009008/bh2475sup1.cif Click here for additional data file. Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813009008/bh2475Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536813009008/bh2475Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C19H14FN3O3Z = 2
Mr = 351.33F(000) = 364
Triclinic, P1Dx = 1.379 Mg m3
Hall symbol: -P 1Melting point: 483 K
a = 9.3898 (3) ÅMo Kα radiation, λ = 0.71073 Å
b = 9.9752 (3) ÅCell parameters from 2000 reflections
c = 11.1324 (3) Åθ = 2–27°
α = 98.765 (1)°µ = 0.10 mm1
β = 113.991 (1)°T = 293 K
γ = 109.520 (1)°Block, colourless
V = 846.09 (4) Å30.23 × 0.20 × 0.19 mm
Bruker Kappa APEXII diffractometer3680 independent reflections
Radiation source: fine-focus sealed tube2993 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.026
Detector resolution: 0 pixels mm-1θmax = 27.0°, θmin = 2.1°
ω and φ scansh = −11→11
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)k = −11→12
Tmin = 0.967, Tmax = 0.974l = −14→14
16948 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.040H-atom parameters constrained
wR(F2) = 0.118w = 1/[σ2(Fo2) + (0.054P)2 + 0.2234P] where P = (Fo2 + 2Fc2)/3
S = 1.06(Δ/σ)max < 0.001
3680 reflectionsΔρmax = 0.24 e Å3
236 parametersΔρmin = −0.22 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
0 constraintsExtinction coefficient: 0.047 (4)
Primary atom site location: structure-invariant direct methods
xyzUiso*/Ueq
C10.90505 (16)0.73779 (15)0.01317 (13)0.0338 (3)
C20.99879 (16)0.69360 (14)0.11020 (13)0.0332 (3)
C30.96024 (16)0.65343 (14)0.22245 (13)0.0331 (3)
H30.94290.54900.21210.040*
C40.79214 (17)0.65768 (15)0.19639 (13)0.0350 (3)
C50.70197 (17)0.70668 (15)0.09468 (13)0.0345 (3)
C60.4686 (2)0.7677 (2)−0.04503 (17)0.0510 (4)
H6A0.36500.7650−0.04590.076*
H6B0.43880.7028−0.13310.076*
H6C0.54400.8691−0.02930.076*
C110.92473 (17)0.76501 (15)−0.10669 (14)0.0359 (3)
C121.0837 (2)0.85749 (18)−0.08937 (16)0.0461 (4)
H121.17880.9101−0.00020.055*
C131.1012 (2)0.8717 (2)−0.20466 (17)0.0538 (4)
H131.20850.9336−0.19290.065*
C140.9618 (2)0.79536 (19)−0.33610 (17)0.0535 (4)
H140.97490.8041−0.41340.064*
C150.8026 (2)0.7059 (2)−0.35402 (16)0.0561 (4)
H150.70760.6555−0.44340.067*
C160.7828 (2)0.69049 (19)−0.23976 (15)0.0479 (4)
H160.67460.6303−0.25210.057*
C211.13736 (18)0.66852 (16)0.10462 (14)0.0384 (3)
C311.11327 (17)0.75233 (15)0.36706 (13)0.0352 (3)
C321.1702 (2)0.90599 (18)0.41307 (17)0.0535 (4)
H321.11290.95070.35560.064*
C331.3112 (3)0.9951 (2)0.54360 (19)0.0682 (5)
H331.34901.09890.57500.082*
C341.3930 (2)0.9269 (2)0.62448 (17)0.0636 (5)
C351.3422 (2)0.7764 (2)0.58302 (18)0.0657 (5)
H351.40150.73320.64090.079*
C361.2002 (2)0.68821 (19)0.45290 (16)0.0515 (4)
H361.16300.58430.42300.062*
N10.72180 (15)0.59726 (14)0.27462 (12)0.0421 (3)
N20.55637 (15)0.71659 (15)0.06560 (12)0.0433 (3)
H20.50960.69090.11590.052*
N31.24589 (17)0.64228 (17)0.10373 (16)0.0549 (4)
O10.76236 (12)0.75260 (11)0.00900 (10)0.0393 (2)
O20.58447 (15)0.60002 (16)0.26385 (13)0.0625 (3)
O30.79677 (15)0.53945 (13)0.35412 (11)0.0523 (3)
F1.53011 (18)1.01296 (16)0.75406 (12)0.1082 (5)
U11U22U33U12U13U23
C10.0310 (6)0.0395 (7)0.0353 (7)0.0147 (5)0.0211 (6)0.0115 (5)
C20.0314 (6)0.0383 (7)0.0328 (6)0.0150 (5)0.0190 (5)0.0104 (5)
C30.0350 (7)0.0355 (6)0.0338 (6)0.0166 (5)0.0197 (6)0.0137 (5)
C40.0338 (7)0.0421 (7)0.0334 (6)0.0147 (6)0.0212 (6)0.0140 (5)
C50.0318 (7)0.0405 (7)0.0341 (6)0.0142 (6)0.0205 (5)0.0112 (5)
C60.0396 (8)0.0696 (10)0.0509 (9)0.0300 (8)0.0219 (7)0.0255 (8)
C110.0388 (7)0.0423 (7)0.0354 (7)0.0199 (6)0.0231 (6)0.0163 (6)
C120.0416 (8)0.0537 (9)0.0415 (8)0.0146 (7)0.0239 (7)0.0173 (7)
C130.0538 (9)0.0618 (10)0.0579 (10)0.0201 (8)0.0396 (8)0.0275 (8)
C140.0731 (11)0.0616 (10)0.0465 (9)0.0319 (9)0.0425 (9)0.0265 (8)
C150.0614 (10)0.0669 (11)0.0342 (8)0.0229 (8)0.0225 (7)0.0167 (7)
C160.0410 (8)0.0590 (9)0.0407 (8)0.0158 (7)0.0218 (7)0.0186 (7)
C210.0354 (7)0.0435 (7)0.0385 (7)0.0164 (6)0.0208 (6)0.0139 (6)
C310.0355 (7)0.0410 (7)0.0337 (7)0.0170 (6)0.0201 (6)0.0148 (5)
C320.0596 (10)0.0441 (8)0.0478 (9)0.0218 (7)0.0186 (8)0.0168 (7)
C330.0755 (13)0.0427 (9)0.0531 (10)0.0088 (9)0.0198 (9)0.0062 (8)
C340.0530 (10)0.0673 (11)0.0362 (8)0.0059 (9)0.0102 (7)0.0117 (8)
C350.0593 (11)0.0757 (12)0.0454 (9)0.0271 (9)0.0106 (8)0.0284 (9)
C360.0544 (9)0.0491 (9)0.0445 (8)0.0236 (7)0.0164 (7)0.0198 (7)
N10.0393 (7)0.0504 (7)0.0388 (6)0.0150 (5)0.0241 (5)0.0170 (5)
N20.0362 (6)0.0633 (8)0.0435 (7)0.0258 (6)0.0260 (5)0.0237 (6)
N30.0446 (8)0.0647 (9)0.0710 (9)0.0295 (7)0.0370 (7)0.0240 (7)
O10.0381 (5)0.0574 (6)0.0411 (5)0.0273 (5)0.0273 (4)0.0259 (5)
O20.0495 (7)0.0981 (9)0.0680 (8)0.0353 (7)0.0449 (6)0.0453 (7)
O30.0570 (7)0.0622 (7)0.0492 (6)0.0258 (6)0.0314 (5)0.0328 (5)
F0.0874 (9)0.0959 (10)0.0492 (7)−0.0025 (7)−0.0066 (6)0.0070 (6)
C1—C21.3293 (18)C13—H130.9300
C1—O11.3795 (15)C14—C151.372 (2)
C1—C111.4717 (17)C14—H140.9300
C2—C211.4276 (18)C15—C161.382 (2)
C2—C31.5089 (17)C15—H150.9300
C3—C41.5012 (18)C16—H160.9300
C3—C311.5222 (18)C21—N31.1369 (18)
C3—H30.9800C31—C321.374 (2)
C4—C51.3796 (19)C31—C361.374 (2)
C4—N11.3855 (17)C32—C331.382 (2)
C5—N21.3130 (17)C32—H320.9300
C5—O11.3566 (15)C33—C341.354 (3)
C6—N21.4498 (19)C33—H330.9300
C6—H6A0.9600C34—C351.351 (3)
C6—H6B0.9600C34—F1.3599 (19)
C6—H6C0.9600C35—C361.381 (2)
C11—C121.382 (2)C35—H350.9300
C11—C161.386 (2)C36—H360.9300
C12—C131.380 (2)N1—O31.2375 (16)
C12—H120.9300N1—O21.2558 (16)
C13—C141.368 (2)N2—H20.8600
C2—C1—O1121.49 (11)C13—C14—H14120.0
C2—C1—C11127.43 (12)C15—C14—H14120.0
O1—C1—C11110.91 (11)C14—C15—C16120.27 (15)
C1—C2—C21119.74 (12)C14—C15—H15119.9
C1—C2—C3124.43 (11)C16—C15—H15119.9
C21—C2—C3115.60 (11)C15—C16—C11119.75 (14)
C4—C3—C2108.51 (10)C15—C16—H16120.1
C4—C3—C31114.77 (10)C11—C16—H16120.1
C2—C3—C31111.06 (10)N3—C21—C2175.98 (15)
C4—C3—H3107.4C32—C31—C36118.79 (14)
C2—C3—H3107.4C32—C31—C3121.42 (12)
C31—C3—H3107.4C36—C31—C3119.77 (12)
C5—C4—N1120.05 (12)C31—C32—C33120.93 (15)
C5—C4—C3123.99 (11)C31—C32—H32119.5
N1—C4—C3115.78 (11)C33—C32—H32119.5
N2—C5—O1111.37 (11)C34—C33—C32118.19 (16)
N2—C5—C4128.35 (12)C34—C33—H33120.9
O1—C5—C4120.27 (11)C32—C33—H33120.9
N2—C6—H6A109.5C35—C34—C33122.83 (16)
N2—C6—H6B109.5C35—C34—F118.40 (17)
H6A—C6—H6B109.5C33—C34—F118.76 (18)
N2—C6—H6C109.5C34—C35—C36118.57 (16)
H6A—C6—H6C109.5C34—C35—H35120.7
H6B—C6—H6C109.5C36—C35—H35120.7
C12—C11—C16119.61 (13)C31—C36—C35120.69 (15)
C12—C11—C1121.15 (12)C31—C36—H36119.7
C16—C11—C1119.16 (12)C35—C36—H36119.7
C13—C12—C11119.86 (14)O3—N1—O2121.01 (11)
C13—C12—H12120.1O3—N1—C4118.35 (12)
C11—C12—H12120.1O2—N1—C4120.64 (12)
C14—C13—C12120.41 (15)C5—N2—C6124.79 (12)
C14—C13—H13119.8C5—N2—H2117.6
C12—C13—H13119.8C6—N2—H2117.6
C13—C14—C15120.07 (14)C5—O1—C1120.68 (10)
O1—C1—C2—C21175.21 (12)C1—C11—C16—C15−175.02 (14)
C11—C1—C2—C210.5 (2)C1—C2—C21—N3−149 (2)
O1—C1—C2—C30.9 (2)C3—C2—C21—N325 (2)
C11—C1—C2—C3−173.81 (12)C4—C3—C31—C32−60.76 (17)
C1—C2—C3—C45.36 (18)C2—C3—C31—C3262.76 (17)
C21—C2—C3—C4−169.14 (11)C4—C3—C31—C36120.98 (14)
C1—C2—C3—C31−121.67 (14)C2—C3—C31—C36−115.50 (14)
C21—C2—C3—C3163.83 (14)C36—C31—C32—C33−0.5 (3)
C2—C3—C4—C5−6.35 (18)C3—C31—C32—C33−178.80 (15)
C31—C3—C4—C5118.52 (14)C31—C32—C33—C340.6 (3)
C2—C3—C4—N1168.72 (11)C32—C33—C34—C35−0.2 (3)
C31—C3—C4—N1−66.41 (15)C32—C33—C34—F−178.89 (18)
N1—C4—C5—N26.2 (2)C33—C34—C35—C36−0.4 (3)
C3—C4—C5—N2−178.88 (13)F—C34—C35—C36178.36 (17)
N1—C4—C5—O1−173.76 (12)C32—C31—C36—C350.0 (2)
C3—C4—C5—O11.1 (2)C3—C31—C36—C35178.28 (15)
C2—C1—C11—C12−51.4 (2)C34—C35—C36—C310.5 (3)
O1—C1—C11—C12133.39 (14)C5—C4—N1—O3172.24 (12)
C2—C1—C11—C16125.37 (16)C3—C4—N1—O3−3.05 (18)
O1—C1—C11—C16−49.82 (17)C5—C4—N1—O2−7.1 (2)
C16—C11—C12—C13−1.8 (2)C3—C4—N1—O2177.62 (12)
C1—C11—C12—C13174.97 (14)O1—C5—N2—C60.9 (2)
C11—C12—C13—C140.3 (3)C4—C5—N2—C6−179.11 (14)
C12—C13—C14—C151.1 (3)N2—C5—O1—C1−173.84 (11)
C13—C14—C15—C16−1.1 (3)C4—C5—O1—C16.16 (19)
C14—C15—C16—C11−0.4 (3)C2—C1—O1—C5−7.26 (19)
C12—C11—C16—C151.8 (2)C11—C1—O1—C5168.27 (11)
D—H···AD—HH···AD···AD—H···A
N2—H2···O20.861.992.6089 (16)128
N2—H2···N3i0.862.302.9811 (17)136
C6—H6A···N3i0.962.603.222 (2)123
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N2—H2⋯O20.861.992.6089 (16)128
N2—H2⋯N3i 0.862.302.9811 (17)136
C6—H6A⋯N3i 0.962.603.222 (2)123

Symmetry code: (i) .

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Authors:  Frank H Allen
Journal:  Acta Crystallogr B       Date:  2002-05-29

2.  5-Acetyl-2-amino-6-methyl-4-(3-nitrophenyl)-4H-pyran-3-carbonitrile and 2-amino-5-ethoxycarbonyl-6-methyl-4-(3-nitrophenyl)-4H-pyrano-3-carbonitrile.

Authors:  V N Nesterov; E A Viltchinskaia
Journal:  Acta Crystallogr C       Date:  2001-05-15       Impact factor: 1.172

3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

4.  2-Amino-4-(1-naphthyl)-5-oxo-5,6,7,8-tetrahydro-4H-chromene-3-carbonitrile and 2-amino-7,7-dimethyl-4-(1-naphthyl)-5-oxo-5,6,7,8-tetrahydro-4H-chromene-3-carbonitrile.

Authors:  Vladimir N Nesterov; David J Wiedenfeld; Svitlana V Nesterova; Mark A Minton
Journal:  Acta Crystallogr C       Date:  2004-04-21       Impact factor: 1.172

5.  Efficient three-component one-pot synthesis of fully substituted pyridin-2(1H)-ones via tandem Knoevenagel condensation-ring-opening of cyclopropane-intramolecular cyclization.

Authors:  Fushun Liang; Xin Cheng; Jing Liu; Qun Liu
Journal:  Chem Commun (Camb)       Date:  2009-05-13       Impact factor: 6.222

6.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
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1.  Synthesis, spectral analysis, quantum studies, NLO, and thermodynamic properties of the novel 5-(6-hydroxy-4-methoxy-1-benzofuran-5-ylcarbonyl)-6-amino-3-methyl-1H-pyrazolo[3,4-b] pyridine (HMBPP).

Authors:  Shimaa Abdel Halim; Magdy A Ibrahim
Journal:  RSC Adv       Date:  2022-04-29       Impact factor: 4.036

  1 in total

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