Literature DB >> 23715323

The Genotype-Tissue Expression (GTEx) project.

.   

Abstract

Genome-wide association studies have identified thousands of loci for common diseases, but, for the majority of these, the mechanisms underlying disease susceptibility remain unknown. Most associated variants are not correlated with protein-coding changes, suggesting that polymorphisms in regulatory regions probably contribute to many disease phenotypes. Here we describe the Genotype-Tissue Expression (GTEx) project, which will establish a resource database and associated tissue bank for the scientific community to study the relationship between genetic variation and gene expression in human tissues.

Entities:  

Mesh:

Year:  2013        PMID: 23715323      PMCID: PMC4010069          DOI: 10.1038/ng.2653

Source DB:  PubMed          Journal:  Nat Genet        ISSN: 1061-4036            Impact factor:   38.330


  18 in total

1.  Potential etiologic and functional implications of genome-wide association loci for human diseases and traits.

Authors:  Lucia A Hindorff; Praveen Sethupathy; Heather A Junkins; Erin M Ramos; Jayashri P Mehta; Francis S Collins; Teri A Manolio
Journal:  Proc Natl Acad Sci U S A       Date:  2009-05-27       Impact factor: 11.205

2.  The NIH Roadmap Epigenomics Mapping Consortium.

Authors:  Bradley E Bernstein; John A Stamatoyannopoulos; Joseph F Costello; Bing Ren; Aleksandar Milosavljevic; Alexander Meissner; Manolis Kellis; Marco A Marra; Arthur L Beaudet; Joseph R Ecker; Peggy J Farnham; Martin Hirst; Eric S Lander; Tarjei S Mikkelsen; James A Thomson
Journal:  Nat Biotechnol       Date:  2010-10       Impact factor: 54.908

3.  Liver and adipose expression associated SNPs are enriched for association to type 2 diabetes.

Authors:  Hua Zhong; John Beaulaurier; Pek Yee Lum; Cliona Molony; Xia Yang; Douglas J Macneil; Drew T Weingarth; Bin Zhang; Danielle Greenawalt; Radu Dobrin; Ke Hao; Sangsoon Woo; Christine Fabre-Suver; Su Qian; Michael R Tota; Mark P Keller; Christina M Kendziorski; Brian S Yandell; Victor Castro; Alan D Attie; Lee M Kaplan; Eric E Schadt
Journal:  PLoS Genet       Date:  2010-05-06       Impact factor: 5.917

4.  New insights into the genetic control of gene expression using a Bayesian multi-tissue approach.

Authors:  Enrico Petretto; Leonardo Bottolo; Sarah R Langley; Matthias Heinig; Chris McDermott-Roe; Rizwan Sarwar; Michal Pravenec; Norbert Hübner; Timothy J Aitman; Stuart A Cook; Sylvia Richardson
Journal:  PLoS Comput Biol       Date:  2010-04-08       Impact factor: 4.475

Review 5.  Revealing the architecture of gene regulation: the promise of eQTL studies.

Authors:  Yoav Gilad; Scott A Rifkin; Jonathan K Pritchard
Journal:  Trends Genet       Date:  2008-07-01       Impact factor: 11.639

6.  Obesity and genetics regulate microRNAs in islets, liver, and adipose of diabetic mice.

Authors:  Enpeng Zhao; Mark P Keller; Mary E Rabaglia; Angie T Oler; Donnie S Stapleton; Kathryn L Schueler; Elias Chaibub Neto; Jee Young Moon; Ping Wang; I-Ming Wang; Pek Yee Lum; Irena Ivanovska; Michele Cleary; Danielle Greenawalt; John Tsang; Youn Jeong Choi; Robert Kleinhanz; Jin Shang; Yun-Ping Zhou; Andrew D Howard; Bei B Zhang; Christina Kendziorski; Nancy A Thornberry; Brian S Yandell; Eric E Schadt; Alan D Attie
Journal:  Mamm Genome       Date:  2009-08       Impact factor: 2.957

7.  Understanding mechanisms underlying human gene expression variation with RNA sequencing.

Authors:  Joseph K Pickrell; John C Marioni; Athma A Pai; Jacob F Degner; Barbara E Engelhardt; Everlyne Nkadori; Jean-Baptiste Veyrieras; Matthew Stephens; Yoav Gilad; Jonathan K Pritchard
Journal:  Nature       Date:  2010-03-10       Impact factor: 49.962

8.  Noisy splicing drives mRNA isoform diversity in human cells.

Authors:  Joseph K Pickrell; Athma A Pai; Yoav Gilad; Jonathan K Pritchard
Journal:  PLoS Genet       Date:  2010-12-09       Impact factor: 5.917

9.  A new statistic and its power to infer membership in a genome-wide association study using genotype frequencies.

Authors:  Kevin B Jacobs; Meredith Yeager; Sholom Wacholder; David Craig; Peter Kraft; David J Hunter; Justin Paschal; Teri A Manolio; Margaret Tucker; Robert N Hoover; Gilles D Thomas; Stephen J Chanock; Nilanjan Chatterjee
Journal:  Nat Genet       Date:  2009-10-04       Impact factor: 38.330

10.  Mapping the genetic architecture of gene expression in human liver.

Authors:  Eric E Schadt; Cliona Molony; Eugene Chudin; Ke Hao; Xia Yang; Pek Y Lum; Andrew Kasarskis; Bin Zhang; Susanna Wang; Christine Suver; Jun Zhu; Joshua Millstein; Solveig Sieberts; John Lamb; Debraj GuhaThakurta; Jonathan Derry; John D Storey; Iliana Avila-Campillo; Mark J Kruger; Jason M Johnson; Carol A Rohl; Atila van Nas; Margarete Mehrabian; Thomas A Drake; Aldons J Lusis; Ryan C Smith; F Peter Guengerich; Stephen C Strom; Erin Schuetz; Thomas H Rushmore; Roger Ulrich
Journal:  PLoS Biol       Date:  2008-05-06       Impact factor: 8.029

View more
  2000 in total

1.  A likelihood-based approach to transcriptome association analysis.

Authors:  Jing Qian; Evan Ray; Regina L Brecha; Muredach P Reilly; Andrea S Foulkes
Journal:  Stat Med       Date:  2018-12-04       Impact factor: 2.373

2.  Experimental Modeling Supports a Role for MyBP-HL as a Novel Myofilament Component in Arrhythmia and Dilated Cardiomyopathy.

Authors:  David Y Barefield; Megan J Puckelwartz; Ellis Y Kim; Lisa D Wilsbacher; Andy H Vo; Emily A Waters; Judy U Earley; Michele Hadhazy; Lisa Dellefave-Castillo; Lorenzo L Pesce; Elizabeth M McNally
Journal:  Circulation       Date:  2017-08-04       Impact factor: 29.690

3.  Novel Mutation in FLNC (Filamin C) Causes Familial Restrictive Cardiomyopathy.

Authors:  Nathan R Tucker; Micheal A McLellan; Dongjian Hu; Jiangchuan Ye; Victoria A Parsons; Robert W Mills; Sebastian Clauss; Elena Dolmatova; Marisa A Shea; David J Milan; Nandita S Scott; Mark Lindsay; Steven A Lubitz; Ibrahim J Domian; James R Stone; Honghuang Lin; Patrick T Ellinor
Journal:  Circ Cardiovasc Genet       Date:  2017-12

4.  Blockade of the Short Form of Prolactin Receptor Induces FOXO3a/EIF-4EBP1-Mediated Cell Death in Uterine Cancer.

Authors:  Yunfei Wen; Ying Wang; Anca Chelariu-Raicu; Elaine Stur; Yuan Liu; Sara Corvigno; Faith Bartsch; Lauren Redfern; Behrouz Zand; Yu Kang; Jinsong Liu; Keith Baggerly; Anil K Sood
Journal:  Mol Cancer Ther       Date:  2020-07-31       Impact factor: 6.261

5.  Genetic variants in the genes encoding rho GTPases and related regulators predict cutaneous melanoma-specific survival.

Authors:  Shun Liu; Yanru Wang; William Xue; Hongliang Liu; Yinghui Xu; Qiong Shi; Wenting Wu; Dakai Zhu; Christopher I Amos; Shenying Fang; Jeffrey E Lee; Terry Hyslop; Yi Li; Jiali Han; Qingyi Wei
Journal:  Int J Cancer       Date:  2017-06-01       Impact factor: 7.396

6.  Integrated querying and version control of context-specific biological networks.

Authors:  Tyler Cowman; Mustafa Coşkun; Ananth Grama; Mehmet Koyutürk
Journal:  Database (Oxford)       Date:  2020-01-01       Impact factor: 3.451

7.  Sex differences in gene expression in response to ischemia in the human left ventricular myocardium.

Authors:  Gregory Stone; Ashley Choi; Oliva Meritxell; Joshua Gorham; Mahyar Heydarpour; Christine E Seidman; Jon G Seidman; Sary F Aranki; Simon C Body; Vincent J Carey; Benjamin A Raby; Barbara E Stranger; Jochen D Muehlschlegel
Journal:  Hum Mol Genet       Date:  2019-05-15       Impact factor: 6.150

8.  Genome-Wide Association Study of the Genetic Determinants of Emphysema Distribution.

Authors:  Adel Boueiz; Sharon M Lutz; Michael H Cho; Craig P Hersh; Russell P Bowler; George R Washko; Eitan Halper-Stromberg; Per Bakke; Amund Gulsvik; Nan M Laird; Terri H Beaty; Harvey O Coxson; James D Crapo; Edwin K Silverman; Peter J Castaldi; Dawn L DeMeo
Journal:  Am J Respir Crit Care Med       Date:  2017-03-15       Impact factor: 21.405

Review 9.  Determining causality and consequence of expression quantitative trait loci.

Authors:  A Battle; S B Montgomery
Journal:  Hum Genet       Date:  2014-04-26       Impact factor: 4.132

10.  Genetic Modifiers of Progression-Free Survival in Never-Smoking Lung Adenocarcinoma Patients Treated with First-Line Tyrosine Kinase Inhibitors.

Authors:  I-Shou Chang; Shih Sheng Jiang; James Chih-Hsin Yang; Wu-Chou Su; Li-Hsin Chien; Chin-Fu Hsiao; Jih-Hsiang Lee; Chih-Yi Chen; Chung-Hsing Chen; Gee-Chen Chang; Zhaoming Wang; Fang-Yi Lo; Kuan-Yu Chen; Wen-Chang Wang; Yuh-Min Chen; Ming-Shyan Huang; Ying-Huang Tsai; Yu-Chun Su; Wan-Shan Hsieh; Wen-Chi Shih; Shwn-Huey Shieh; Tsung-Ying Yang; Qing Lan; Nathaniel Rothman; Chien-Jen Chen; Stephen J Chanock; Pan-Chyr Yang; Chao A Hsiung
Journal:  Am J Respir Crit Care Med       Date:  2017-03-01       Impact factor: 21.405

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.