Literature DB >> 23715016

Genetic mapping of variation in dauer larvae development in growing populations of Caenorhabditis elegans.

J W M Green1, L B Snoek, J E Kammenga, S C Harvey.   

Abstract

In the nematode Caenorhabditis elegans, the appropriate induction of dauer larvae development within growing populations is likely to be a primary determinant of genotypic fitness. The underlying genetic architecture of natural genetic variation in dauer formation has, however, not been thoroughly investigated. Here, we report extensive natural genetic variation in dauer larvae development within growing populations across multiple wild isolates. Moreover, bin mapping of introgression lines (ILs) derived from the genetically divergent isolates N2 and CB4856 reveals 10 quantitative trait loci (QTLs) affecting dauer formation. Comparison of individual ILs to N2 identifies an additional eight QTLs, and sequential IL analysis reveals six more QTLs. Our results also show that a behavioural, laboratory-derived, mutation controlled by the neuropeptide Y receptor homolog npr-1 can affect dauer larvae development in growing populations. These findings illustrate the complex genetic architecture of variation in dauer larvae formation in C. elegans and may help to understand how the control of variation in dauer larvae development has evolved.

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Year:  2013        PMID: 23715016      PMCID: PMC3807260          DOI: 10.1038/hdy.2013.50

Source DB:  PubMed          Journal:  Heredity (Edinb)        ISSN: 0018-067X            Impact factor:   3.821


  37 in total

1.  Genome-wide gene expression regulation as a function of genotype and age in C. elegans.

Authors:  Ana Viñuela; L Basten Snoek; Joost A G Riksen; Jan E Kammenga
Journal:  Genome Res       Date:  2010-05-20       Impact factor: 9.043

2.  Genetic variation for stress-response hormesis in C. elegans lifespan.

Authors:  Miriam Rodriguez; L Basten Snoek; Joost A G Riksen; Roel P Bevers; Jan E Kammenga
Journal:  Exp Gerontol       Date:  2012-05-14       Impact factor: 4.032

3.  Natural variation in Pristionchus pacificus dauer formation reveals cross-preference rather than self-preference of nematode dauer pheromones.

Authors:  Melanie G Mayer; Ralf J Sommer
Journal:  Proc Biol Sci       Date:  2011-02-09       Impact factor: 5.349

4.  A shortcut to identifying small molecule signals that regulate behavior and development in Caenorhabditis elegans.

Authors:  Chirag Pungaliya; Jagan Srinivasan; Bennett W Fox; Rabia U Malik; Andreas H Ludewig; Paul W Sternberg; Frank C Schroeder
Journal:  Proc Natl Acad Sci U S A       Date:  2009-04-03       Impact factor: 11.205

5.  Small-molecule pheromones that control dauer development in Caenorhabditis elegans.

Authors:  Rebecca A Butcher; Masaki Fujita; Frank C Schroeder; Jon Clardy
Journal:  Nat Chem Biol       Date:  2007-06-10       Impact factor: 15.040

6.  Natural variation in a neuropeptide Y receptor homolog modifies social behavior and food response in C. elegans.

Authors:  M de Bono; C I Bargmann
Journal:  Cell       Date:  1998-09-04       Impact factor: 41.582

7.  Aging Uncouples Heritability and Expression-QTL in Caenorhabditis elegans.

Authors:  Ana Viñuela; L Basten Snoek; Joost A G Riksen; Jan E Kammenga
Journal:  G3 (Bethesda)       Date:  2012-05-01       Impact factor: 3.154

8.  Parallel evolution of domesticated Caenorhabditis species targets pheromone receptor genes.

Authors:  Patrick T McGrath; Yifan Xu; Michael Ailion; Jennifer L Garrison; Rebecca A Butcher; Cornelia I Bargmann
Journal:  Nature       Date:  2011-08-17       Impact factor: 49.962

9.  Developmental plasticity and the evolution of parasitism in an unusual nematode, Parastrongyloides trichosuri.

Authors:  Susan J Stasiuk; Maxwell J Scott; Warwick N Grant
Journal:  Evodevo       Date:  2012-01-03       Impact factor: 2.250

10.  A Caenorhabditis elegans wild type defies the temperature-size rule owing to a single nucleotide polymorphism in tra-3.

Authors:  Jan E Kammenga; Agnieszka Doroszuk; Joost A G Riksen; Esther Hazendonk; Laurentiu Spiridon; Andrei-Jose Petrescu; Marcel Tijsterman; Ronald H A Plasterk; Jaap Bakker
Journal:  PLoS Genet       Date:  2007-01-09       Impact factor: 5.917

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  24 in total

1.  Farming and public goods production in Caenorhabditis elegans populations.

Authors:  Shashi Thutupalli; Sravanti Uppaluri; George W A Constable; Simon A Levin; Howard A Stone; Corina E Tarnita; Clifford P Brangwynne
Journal:  Proc Natl Acad Sci U S A       Date:  2017-02-09       Impact factor: 11.205

2.  Mutation independently affects reproductive traits and dauer larvae development in mutation accumulation lines of Caenorhabditis elegans.

Authors:  Arthur J Hills; James W M Green; Simon C Harvey
Journal:  Dev Genes Evol       Date:  2017-11-23       Impact factor: 0.900

Review 3.  The laboratory domestication of Caenorhabditis elegans.

Authors:  Mark G Sterken; L Basten Snoek; Jan E Kammenga; Erik C Andersen
Journal:  Trends Genet       Date:  2015-03-21       Impact factor: 11.639

4.  Natural Genetic Variation Differentially Affects the Proteome and Transcriptome in Caenorhabditis elegans.

Authors:  Polina Kamkina; L Basten Snoek; Jonas Grossmann; Rita J M Volkers; Mark G Sterken; Michael Daube; Bernd Roschitzki; Claudia Fortes; Ralph Schlapbach; Alexander Roth; Christian von Mering; Michael O Hengartner; Sabine P Schrimpf; Jan E Kammenga
Journal:  Mol Cell Proteomics       Date:  2016-03-04       Impact factor: 5.911

5.  WormQTL2: an interactive platform for systems genetics in Caenorhabditis elegans.

Authors:  Basten L Snoek; Mark G Sterken; Margi Hartanto; Albert-Jan van Zuilichem; Jan E Kammenga; Dick de Ridder; Harm Nijveen
Journal:  Database (Oxford)       Date:  2020-01-01       Impact factor: 3.451

6.  Winter Aconite (Eranthis hyemalis) Lectin as a cytotoxic effector in the lifecycle of Caenorhabditis elegans.

Authors:  Marie-Therese McConnell; David R Lisgarten; Lee J Byrne; Simon C Harvey; Emilia Bertolo
Journal:  PeerJ       Date:  2015-08-20       Impact factor: 2.984

7.  Travelling at a slug's pace: possible invertebrate vectors of Caenorhabditis nematodes.

Authors:  Carola Petersen; Ruben Joseph Hermann; Mike-Christoph Barg; Rebecca Schalkowski; Philipp Dirksen; Camilo Barbosa; Hinrich Schulenburg
Journal:  BMC Ecol       Date:  2015-07-13       Impact factor: 2.964

Review 8.  From QTL to gene: C. elegans facilitates discoveries of the genetic mechanisms underlying natural variation.

Authors:  Kathryn S Evans; Marijke H van Wijk; Patrick T McGrath; Erik C Andersen; Mark G Sterken
Journal:  Trends Genet       Date:  2021-07-03       Impact factor: 11.639

9.  Ten years of life in compost: temporal and spatial variation of North German Caenorhabditis elegans populations.

Authors:  Carola Petersen; Manja Saebelfeld; Camilo Barbosa; Barbara Pees; Ruben Joseph Hermann; Rebecca Schalkowski; Eike Andreas Strathmann; Philipp Dirksen; Hinrich Schulenburg
Journal:  Ecol Evol       Date:  2015-07-15       Impact factor: 2.912

10.  Genotype-dependent lifespan effects in peptone deprived Caenorhabditis elegans.

Authors:  Jana J Stastna; L Basten Snoek; Jan E Kammenga; Simon C Harvey
Journal:  Sci Rep       Date:  2015-11-05       Impact factor: 4.379

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