Literature DB >> 23706738

Gene expression is circular: factors for mRNA degradation also foster mRNA synthesis.

Gal Haimovich1, Daniel A Medina, Sebastien Z Causse, Manuel Garber, Gonzalo Millán-Zambrano, Oren Barkai, Sebastián Chávez, José E Pérez-Ortín, Xavier Darzacq, Mordechai Choder.   

Abstract

Maintaining proper mRNA levels is a key aspect in the regulation of gene expression. The balance between mRNA synthesis and decay determines these levels. We demonstrate that most yeast mRNAs are degraded by the cytoplasmic 5'-to-3' pathway (the "decaysome"), as proposed previously. Unexpectedly, the level of these mRNAs is highly robust to perturbations in this major pathway because defects in various decaysome components lead to transcription downregulation. Moreover, these components shuttle between the cytoplasm and the nucleus, in a manner dependent on proper mRNA degradation. In the nucleus, they associate with chromatin-preferentially ∼30 bp upstream of transcription start-sites-and directly stimulate transcription initiation and elongation. The nuclear role of the decaysome in transcription is linked to its cytoplasmic role in mRNA decay; linkage, in turn, seems to depend on proper shuttling of its components. The gene expression process is therefore circular, whereby the hitherto first and last stages are interconnected.
Copyright © 2013 Elsevier Inc. All rights reserved.

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Year:  2013        PMID: 23706738     DOI: 10.1016/j.cell.2013.05.012

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  161 in total

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9.  Global analysis of mRNA isoform half-lives reveals stabilizing and destabilizing elements in yeast.

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Review 10.  A self-encoded capsid derivative restricts Ty1 retrotransposition in Saccharomyces.

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