| Literature DB >> 23705663 |
Sheng Li Zhou1, Juan Cui, Zong Min Fan, Xue Min Li, Ji Lin Li, Bao Chi Liu, Dong Yun Zhang, Hong Yan Liu, Xue Ke Zhao, Xin Song, Ran Wang, Ze Chen Yan, Hui Xing Yi, Li Dong Wang.
Abstract
BACKGROUND: The role of tumor suppressor gene RASSF1A in the esophageal and gastric cardia carcinogenesis is still inconclusive. In this study, the polymorphism, promoter methylation and gene expression of RASSF1A were characterized in esophageal squamous cell carcinoma (ESCC) and gastric cardia adenocarcinoma (GCA).Entities:
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Year: 2013 PMID: 23705663 PMCID: PMC3668992 DOI: 10.1186/1471-2407-13-259
Source DB: PubMed Journal: BMC Cancer ISSN: 1471-2407 Impact factor: 4.430
Figure 1The genotying results of the SNP at codon 133. PCR analysis of the RASSF1A SNP at codon 133. Land 1: Marker; Land 2: Ser/Sergenotype; Land 3 and 4: Ala/Ala genotypes; Land 5:Ala/Ser genotype.
Figure 2MSP analysis of gene in ESCC and GCA tissue. Representative MSP results of three ESCC tissues (A, T1, T2, and T3) and (B) was the results of three GCA tissues (T4, T5, and T6). Lane M: indicates the presence of methylated genes; Lane U: indicates the presence of unmethylated genes. T1 and T4 were fully hypermethylation which revealed 93 bp band (M) with hypermethylated primers; T3 and T6 were unmethylation, having only unmethylated band of 105 bp; T2 and T5 were Hemi-methylation with both hypermethylated band and unmethylated band.
The genotypings of A133S in gene on ESCC and GCA patients and normal controls
| 211 | (89.8) | 99 | (88.4) | | | | 94 | (81.0) | | | | |
| 23 | (9.7) | 11 | (9.8) | 0.96 | 1.02 | (0.48–2.17) | 18 | (15.5) | 0.09 | 1.76 | (0.91–3.41) | |
| 1 | (0.4) | 2 | (1.8) | 0.24 | 4.26 | (0.38–47.02) | 4 | (3.5) | 9.01 | (0.99–83.31) | ||
| 24 | (10.2) | 13 | (11.6) | 0.69 | 1.15 | (0.51–2.44) | 22 | (19.0) | 2.06 | (1.09–3.97) | ||
*: Ala/Ala: homozygous for wild-type codon 133, Ala/Ser: heterozygote for codon 133, Ser/Ser: homozygous for codon A133S.
The profiles of promoter hypermethylation in ESCC and GCA tissues and in normal tissues adjacent to the corresponding ESCC and GCA
| 143 | 76 | (53) | 67 | (47) | 5.90 | (2.78–12.52) | ||
| 62 | 10 | (16) | 52 | (84) | ||||
| 92 | 60 | (65) | 32 | (35) | 7.50 | (2.78–20.23) | ||
| 30 | 6 | (20) | 24 | (80) | ||||
#: ESCC: esophageal squamous cell carcinoma, ENOR: esophageal normal epithelial tissue, GCA: gastric cardia adenocarcinoma, GNOR: gastric cardia normal epithelial tissue.
Distribution of promoter methylation by clinicopathological classifications and protein expression in ESCC and GCA tissues
| | | | | | | | | | | | | | | | | | | |
| 82 | (57) | 43 | (52) | 39 | (48) | | | | 58 | (63) | 37 | (64) | 21 | (36) | | | | |
| 61 | (43) | 33 | (54) | 28 | (46) | 0.84 | 0.94 | (0.48–1.82) | 34 | (37 | 23 | (68) | 11 | (32) | 0.71 | 0.84 | (0.34–2.07) | |
| | | | | | | | | | | | | | | | | | | |
| 25 | (17) | 13 | (52) | 12 | (48) | | | | 21 | (23) | 16 | (76) | 5 | (24) | | | | |
| 48 | (34) | 37 | (77) | 11 | (23) | 3.11 | (1.10–8.73) | 32 | (35) | 19 | (59) | 13 | (41) | 0.21 | 0.46 | (0.13–1.56) | ||
| 70 | (49) | 26 | (37) | 44 | (63) | 0.20 | 0.55 | (0.22–1.37) | 39 | (42) | 25 | (64) | 14 | (36) | 0.34 | 0.56 | (0.17–1.85) | |
| | | | | | | | | | | | | | | | ||||
| 38 | (27) | 18 | (47) | 20 | (53) | | | | 17 | (18) | 10 | (59) | 7 | (41) | | | | |
| 25 | (17) | 16 | (64) | 9 | (36) | 0.58 | 0.74 | (0.25–2.20) | 32 | (34) | 24 | (67) | 8 | (33) | 0.25 | 2.10 | (0.60–7.36) | |
| 29 | (20) | 19 | (66) | 10 | (34) | 0.91 | 0.92 | (0.23–3.77) | 33 | (36) | 21 | (64) | 12 | (36) | 0.74 | 1.23 | (0.37–4.06) | |
| 19 | (13) | 15 | (79) | 4 | (31) | 0.06 | 0.39 | (0.14–1.05) | ND | ND | ND | ND | ND | ND | | | | |
| 32 | (22) | 8 | (25) | 24 | (75) | | | | 10 | (11) | 5 | (50) | 5 | (50) | | | | |
| | | | | | | | | | | | | | | | ||||
| 32 | (22) | 22 | (69) | 10 | (31) | | | | 20 | (22) | 14 | (70) | 6 | (30) | | | | |
| 70 | (49) | 27 | (39) | 43 | (61) | 0.28 | (0.12–0.69) | 31 | (34) | 22 | (71) | 9 | (29) | 0.94 | 1.05 | (0.31–3.59) | ||
| 34 | (24) | 26 | (76) | 8 | (24) | 0.48 | 1.48 | (0.50–4.39) | 41 | (45) | 24 | (59) | 17 | (41) | 0.39 | 0.61 | (0.19–1.89) | |
| 7 | (5) | 1 | (14) | 6 | (86) | | | | ND | ND | ND | ND | ND | ND | | | | |
| | | | | | | | | | | | | | | | | |||
| 25 | (17) | 13 | (52) | 12 | (48) | | | | 14 | (15) | 9 | (64) | 5 | (36) | | | | |
| 113 | (79) | 62 | (55) | 51 | (45) | 0.38 | 1.38 | (0.68–2.82) | 78 | (85) | 51 | (65) | 27 | (35) | 0.77 | 1.20 | (0.36–4.04) | |
| 5 | (3) | 2 | (40) | 3 | (60) | | | | ND▲ | ND | ND | ND | ND | ND | | | | |
| | | | | | | | | | | | | | | | | |||
| 91 | (64) | 48 | (53) | 43 | (47) | | | | 44 | (48) | 28 | (64) | 16 | (36) | | | | |
| 47 | (33) | 27 | (57) | 20 | (43) | 0.60 | 1.21 | (0.60–2.46) | 48 | (52) | 32 | (67) | 16 | (33) | 0.76 | 1.143 | (0.48–2.70) | |
| 5 | (3) | 1 | (20) | 4 | (80) | | | | ND | ND | ND | ND | ND | ND | | | | |
| | | | | | | | | | | | | | | | | |||
| 91 | (64) | 47 | (52) | 44 | (48) | | | | 47 | (51) | 30 | (64) | 17 | (36) | | | | |
| 47 | (33) | 28 | (60) | 19 | (40) | 0.38 | 1.38 | (0.68–2.82) | 45 | (49) | 30 | (67) | 15 | (33) | 0.78 | 1.13 | (0.48–2.68) | |
| 5 | (3) | 1 | (20) | 4 | (80) | | | | ND | ND | ND | ND | ND | ND | | | | |
| | | | | | | | | | | | | | | | | | | |
| 17 | (63) | 6 | (35) | 11 | (65) | | | | 14 | (58) | 5 | (36) | 9 | (14) | | | | |
| 10 | (37) | 7 | (70) | 3 | (30) | 0.09 | 0.23 | (0.04–1.25) | 10 | (42) | 10 | (100) | 0 | (0) | ||||
: Histopathologically, the gross pathologic types were different for ESCC and GCA, in ESCC, 1: medullary; 2: fungating; 3: ulcerating; 4: constriction & intraluminal; in GCA, 1: protruding; 2: ulcerating; 3: infiltrating.
▲: Not detected.
RASSF1A protein expression in ESCC and GCA tissues and in normal tissues adjacent to the corresponding ESCC and GCA
| 27 | 17 | (63) | 10 | (37 ) | 0.24 | 0.47 | (0.13–1.67) | |
| 23 | 18 | (78) | 5 | (22) | ||||
| 24 | 14 | (58) | 10 | (42) | 0.16 | (0.03–0.83) | ||
| 20 | 18 | (90) | 2 | (10) | ||||
#: ESCC: esophageal squamous cell carcinoma, ENOR: esophageal normal epithelial tissue, GCA: gastric cardia adenocarcinoma, GNOR: gastric cardia normal epithelial tissue.
Correlation between RASSF1A protein expression and clinicopathological parameters of ESCC and GCA patients
| | | | | | | | | | | | | | | | | ||
| | 18 | (67) | 10 | (56) | 8 | (44) | | | 14 | (58) | 6 | (43) | 8 | (57) | | | |
| | 9 | (33) | 7 | (78) | 2 | (22) | 0.27 | 0.36(0.06–2.22) | 10 | (42) | 8 | (80) | 2 | (20) | 0.08 | 0.19(0.03–1.23) | |
| | | | | | | | | | | | | | | | | | |
| | 12 | (44) | 10 | (83) | 2 | (17) | | | 10 | (42) | 9 | (90) | 1 | (10) | | | |
| | 15 | (56) | 7 | (47) | 8 | (53) | 0.06 | 5.71(0.92–35.48) | 14 | (58) | 5 | (36) | 9 | (64) | 16.20(1.57–167.74) | ||
| | | | | | | | | | | | | | | ||||
| | 23 | (85) | 13 | (57) | 10 | (43) | | | 14 | (58) | 6 | (43) | 8 | (57) | | | |
| | 4 | (15) | 4 | (100) | 0 | (0) | 0.10 | | 10 | (42) | 8 | (80) | 2 | (20) | 0.08 | 0.19(0.03–1.23) | |
| | | | | | | | | | | | | | | ||||
| | 6 | (22) | 4 | (67) | 2 | (33) | | | 2 | (8) | 1 | (50) | 1 | (50) | | | |
| | 21 | (78) | 13 | (62) | 8 | (38) | 0.57 | 1.88(0.22–15.93) | 22 | (92) | 13 | (59) | 9 | (41) | 0.73 | 0.75(0.15–3.83) | |
| | | | | | | | | | | | | | | ||||
| | 20 | (74) | 13 | (65) | 7 | (35) | | | 15 | (63) | 9 | (60) | 6 | (40) | | | |
| | 7 | (26) | 4 | (57) | 3 | (43) | 0.41 | 2.18(0.35–13.76) | 9 | (38) | 5 | (56) | 4 | (44) | 0.83 | 0.83(0.16–4.44) | |
| | | | | | | | | | | | | | |||||
| | 20 | (74) | 12 | (60) | 8 | (40) | | | 21 | (88) | 12 | (57) | 9 | (43) | | | |
| 7 | (26) | 5 | (71) | 2 | (29) | 0.59 | 1.67(0.26–10.79) | 3 | (13) | 2 | (67) | 1 | (33) | 0.76 | 1.50(0.12–19.24) | ||