Literature DB >> 23703245

Characterization and preliminary mutation analysis of a thermostable alanine racemase from Thermoanaerobacter tengcongensis MB4.

Zhangwei Xue1, Yi Hu, Shujing Xu, Kouhei Ohnishi, Yanhe Ma, Jiansong Ju, Baohua Zhao.   

Abstract

A thermostable alanine racemase from Thermoanaerobacter tengcongensis MB4 was successfully expressed in Escherichia coli and characterized. The full-length gene MBalr2 (1164 bp) encodes 388 amino acid residues including 6 out of 8 highly conserved amino acid residues at the entryway to the active site of alanine racemase. Recombinant MBAlr2 and three mutants (S171A, H359Y and double mutation S171A/H359Y) of MBAlr2 were purified by His6-tag affinity column and gel filtration chromatography. The purified protein MBAlr2 was a dimeric PLP-dependent enzyme with broad substrate specificity. The optimal racemization temperature and pH were 70-75 °C and 11.0, respectively. The kinetic parameters K m and V max of MBAlr2 at 70 °C, determined by HPLC, were 20.16 mM and 1414 μmol min(-1) for L-alanine, and 9.95 mM and 702.6 μmol min(-1) for D-alanine, respectively. Enzymatic assays showed that the activity of both mutants (S171A and H359Y) was lost, but the activity of mutant S171A/H359Y was recovered to 69.8 % of wild type, which suggested that residues Ser171 and His359 might be the important residues for catalytic mechanisms of MBAlr2.

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Year:  2013        PMID: 23703245     DOI: 10.1007/s00792-013-0545-5

Source DB:  PubMed          Journal:  Extremophiles        ISSN: 1431-0651            Impact factor:   2.395


  35 in total

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2.  The SWISS-MODEL workspace: a web-based environment for protein structure homology modelling.

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Journal:  Life Sci       Date:  2006-12-28       Impact factor: 5.037

4.  Characterization of the alanine racemases from Pseudomonas aeruginosa PAO1.

Authors:  U Strych; H C Huang; K L Krause; M J Benedik
Journal:  Curr Microbiol       Date:  2000-10       Impact factor: 2.188

5.  Thermostable alanine racemase from Bacillus stearothermophilus: molecular cloning of the gene, enzyme purification, and characterization.

Authors:  K Inagaki; K Tanizawa; B Badet; C T Walsh; H Tanaka; K Soda
Journal:  Biochemistry       Date:  1986-06-03       Impact factor: 3.162

6.  Production of L -alanine by metabolically engineered Escherichia coli.

Authors:  Xueli Zhang; Kaemwich Jantama; J C Moore; K T Shanmugam; L O Ingram
Journal:  Appl Microbiol Biotechnol       Date:  2007-09-15       Impact factor: 4.813

7.  Mechanism of D-cycloserine action: alanine racemase from Escherichia coli W.

Authors:  M P Lambert; F C Neuhaus
Journal:  J Bacteriol       Date:  1972-06       Impact factor: 3.490

8.  Microdetermination of D-amino acids and D-amino acid oxidase activity with 3,methyl-2-benzothiazolone hydrazone hydrochloride.

Authors:  K Soda
Journal:  Anal Biochem       Date:  1968-10-24       Impact factor: 3.365

9.  A structure-based design approach for the identification of novel inhibitors: application to an alanine racemase.

Authors:  Gabriela Iurcu Mustata; James M Briggs
Journal:  J Comput Aided Mol Des       Date:  2002-12       Impact factor: 3.686

10.  Structural features and kinetic characterization of alanine racemase from Staphylococcus aureus (Mu50).

Authors:  Emma R Scaletti; Sylvia R Luckner; Kurt L Krause
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2011-12-09
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  1 in total

1.  Crystal Structure of a Thermostable Alanine Racemase from Thermoanaerobacter tengcongensis MB4 Reveals the Role of Gln360 in Substrate Selection.

Authors:  Xiaoliang Sun; Guangzheng He; Xiaoyan Wang; Shujing Xu; Jiansong Ju; Xiaoling Xu
Journal:  PLoS One       Date:  2015-07-28       Impact factor: 3.240

  1 in total

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