Literature DB >> 23690595

In vitro reconstitution of lipid-dependent dual topology and postassembly topological switching of a membrane protein.

Heidi Vitrac1, Mikhail Bogdanov, William Dowhan.   

Abstract

Phospholipids could exert their effect on membrane protein topology either directly by interacting with topogenic signals of newly inserted proteins or indirectly by influencing the protein assembly machinery. In vivo lactose permease (LacY) of Escherichia coli displays a mixture of topological conformations ranging from complete inversion of the N-terminal helical bundle to mixed topology and then to completely native topology as phosphatidylethanolamine (PE) is increased from 0% to 70% of membrane phospholipids. These topological conformers are interconvertible by postassembly synthesis or dilution of PE in vivo. To investigate whether coexistence of multiple topological conformers is dependent solely on the membrane lipid composition, we determined the topological organization of LacY in an in vitro proteoliposome system in which lipid composition can be systematically controlled before (liposomes) and after (fliposomes) reconstitution using a lipid exchange technique. Purified LacY reconstituted into preformed liposomes of increasing PE content displayed inverted topology at low PE and then a mixture of inverted and proper topologies with the latter increasing with increasing PE until all LacY adopted its native topology. Interconversion between topological conformers of LacY was observed in a PE dose-dependent manner by either increasing or decreasing PE levels in proteoliposomes postreconstitution of LacY, clearly demonstrating that membrane protein topology can be changed simply by changing membrane lipid composition independent of other cellular factors. The results provide a thermodynamic-based lipid-dependent model for shifting the equilibrium between different conformational states of a membrane protein.

Entities:  

Mesh:

Substances:

Year:  2013        PMID: 23690595      PMCID: PMC3677496          DOI: 10.1073/pnas.1304375110

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  47 in total

1.  Sec61p contributes to signal sequence orientation according to the positive-inside rule.

Authors:  Veit Goder; Tina Junne; Martin Spiess
Journal:  Mol Biol Cell       Date:  2003-12-10       Impact factor: 4.138

2.  Structure and mechanism of the lactose permease of Escherichia coli.

Authors:  Jeff Abramson; Irina Smirnova; Vladimir Kasho; Gillian Verner; H Ronald Kaback; So Iwata
Journal:  Science       Date:  2003-08-01       Impact factor: 47.728

Review 3.  When biochemistry meets structural biology: the cautionary tale of EmrE.

Authors:  Shimon Schuldiner
Journal:  Trends Biochem Sci       Date:  2007-04-23       Impact factor: 13.807

4.  Study of polytopic membrane protein topological organization as a function of membrane lipid composition.

Authors:  Mikhail Bogdanov; Philip N Heacock; William Dowhan
Journal:  Methods Mol Biol       Date:  2010

5.  Cellular mechanisms of membrane protein folding.

Authors:  William R Skach
Journal:  Nat Struct Mol Biol       Date:  2009-06       Impact factor: 15.369

6.  Membrane composition influences the topology bias of bacterial integral membrane proteins.

Authors:  Denice C Bay; Raymond J Turner
Journal:  Biochim Biophys Acta       Date:  2012-09-13

Review 7.  Lipid-dependent membrane protein topogenesis.

Authors:  William Dowhan; Mikhail Bogdanov
Journal:  Annu Rev Biochem       Date:  2009       Impact factor: 23.643

Review 8.  The role of lipids in membrane insertion and translocation of bacterial proteins.

Authors:  Annemieke van Dalen; Ben de Kruijff
Journal:  Biochim Biophys Acta       Date:  2004-11-11

9.  The oligomeric state and arrangement of the active bacterial translocon.

Authors:  Karine Deville; Vicki A M Gold; Alice Robson; Sarah Whitehouse; Richard B Sessions; Stephen A Baldwin; Sheena E Radford; Ian Collinson
Journal:  J Biol Chem       Date:  2010-11-05       Impact factor: 5.157

10.  Glycosylation can influence topogenesis of membrane proteins and reveals dynamic reorientation of nascent polypeptides within the translocon.

Authors:  V Goder; C Bieri; M Spiess
Journal:  J Cell Biol       Date:  1999-10-18       Impact factor: 10.539

View more
  49 in total

Review 1.  Lipid-Assisted Membrane Protein Folding and Topogenesis.

Authors:  William Dowhan; Heidi Vitrac; Mikhail Bogdanov
Journal:  Protein J       Date:  2019-06       Impact factor: 2.371

2.  YidC protein, a molecular chaperone for LacY protein folding via the SecYEG protein machinery.

Authors:  Lu Zhu; H Ronald Kaback; Ross E Dalbey
Journal:  J Biol Chem       Date:  2013-08-08       Impact factor: 5.157

Review 3.  Marginally hydrophobic transmembrane α-helices shaping membrane protein folding.

Authors:  Minttu T De Marothy; Arne Elofsson
Journal:  Protein Sci       Date:  2015-05-30       Impact factor: 6.725

4.  Stable membrane orientations of small dual-topology membrane proteins.

Authors:  Nir Fluman; Victor Tobiasson; Gunnar von Heijne
Journal:  Proc Natl Acad Sci U S A       Date:  2017-07-11       Impact factor: 11.205

5.  Complete topology inversion can be part of normal membrane protein biogenesis.

Authors:  Nicholas B Woodall; Sarah Hadley; Ying Yin; James U Bowie
Journal:  Protein Sci       Date:  2017-02-25       Impact factor: 6.725

6.  Accurate In Silico Modeling of Asymmetric Bilayers Based on Biophysical Principles.

Authors:  Milka Doktorova; Harel Weinstein
Journal:  Biophys J       Date:  2018-09-15       Impact factor: 4.033

7.  Folding of Aquaporin 1: multiple evidence that helix 3 can shift out of the membrane core.

Authors:  Minttu T Virkki; Nitin Agrawal; Elin Edsbäcker; Susana Cristobal; Arne Elofsson; Anni Kauko
Journal:  Protein Sci       Date:  2014-05-14       Impact factor: 6.725

8.  Lipid bilayer composition can influence the orientation of proteorhodopsin in artificial membranes.

Authors:  Ramya Tunuguntla; Mangesh Bangar; Kyunghoon Kim; Pieter Stroeve; Caroline M Ajo-Franklin; Aleksandr Noy
Journal:  Biophys J       Date:  2013-09-17       Impact factor: 4.033

9.  Impact of Membrane Phospholipid Alterations in Escherichia coli on Cellular Function and Bacterial Stress Adaptation.

Authors:  Veronica W Rowlett; Venkata K P S Mallampalli; Anja Karlstaedt; William Dowhan; Heinrich Taegtmeyer; William Margolin; Heidi Vitrac
Journal:  J Bacteriol       Date:  2017-06-13       Impact factor: 3.490

10.  Effects of mixed proximal and distal topogenic signals on the topological sensitivity of a membrane protein to the lipid environment.

Authors:  Heidi Vitrac; William Dowhan; Mikhail Bogdanov
Journal:  Biochim Biophys Acta Biomembr       Date:  2017-04-19       Impact factor: 3.747

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.