Literature DB >> 23687916

Probing the structure and dynamics of confined water in AOT reverse micelles.

Anna Victoria Martinez1, Laura Dominguez, Edyta Małolepsza, Adam Moser, Zack Ziegler, John E Straub.   

Abstract

Reverse micelles are attractive nanoscale systems used for the confinement of molecules in studies of structure and chemical reactions, including protein folding, and aggregation. The simulation of reverse micelles, in which a water "pool" is separated from a nonpolar bulk phase by a surfactant layer, poses significant challenges to empirical force fields due to the diversity of interactions between nonpolar, polar, and charged groups. We have explored the dependence of system density, reverse micelle structure, and water configurational relaxation times as a function of reverse micelle composition, including water:surfactant ratio, absolute number of water molecules, and force field using molecular dynamics simulations. The resulting structures and dynamics are found to depend more on the force field used than on varying interpretations of the water:surfactant ratio in terms of absolute size of the reverse micelle. Substantial deviations from spherical reverse micelle geometries are observed in all unrestrained simulations. Rotational anisotropy decay times and water residence times show a strong dependence on force field and water model used, but power-law relaxation in time is observed independent of the force field. Our results suggest the need for further experimental study of reverse micelles that can provide insight into the distribution and dynamics of shape fluctuations in these complex systems.

Entities:  

Mesh:

Substances:

Year:  2013        PMID: 23687916      PMCID: PMC3709849          DOI: 10.1021/jp402270e

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  26 in total

1.  Orientational dynamics of liquids confined in nanoporous sol-gel glasses studied by optical kerr effect spectroscopy.

Authors:  Richard A Farrer; John T Fourkas
Journal:  Acc Chem Res       Date:  2003-08       Impact factor: 22.384

2.  A biomolecular force field based on the free enthalpy of hydration and solvation: the GROMOS force-field parameter sets 53A5 and 53A6.

Authors:  Chris Oostenbrink; Alessandra Villa; Alan E Mark; Wilfred F van Gunsteren
Journal:  J Comput Chem       Date:  2004-10       Impact factor: 3.376

3.  Reorientation dynamics of nanoconfined water: power-law decay, hydrogen-bond jumps, and test of a two-state model.

Authors:  Damien Laage; Ward H Thompson
Journal:  J Chem Phys       Date:  2012-01-28       Impact factor: 3.488

4.  Testing the core/shell model of nanoconfined water in reverse micelles using linear and nonlinear IR spectroscopy.

Authors:  Ivan R Piletic; David E Moilanen; D B Spry; Nancy E Levinger; M D Fayer
Journal:  J Phys Chem A       Date:  2006-04-20       Impact factor: 2.781

5.  Solvation dynamics in reverse micelles: the role of headgroup-solute interactions.

Authors:  James Faeder; Branka M Ladanyi
Journal:  J Phys Chem B       Date:  2005-04-14       Impact factor: 2.991

6.  Ultrafast dynamics in reverse micelles.

Authors:  Nancy E Levinger; Laura A Swafford
Journal:  Annu Rev Phys Chem       Date:  2009       Impact factor: 12.703

7.  Stability and comparative analysis of AOT/water/isooctane reverse micelle system using dynamic light scattering and molecular dynamics.

Authors:  V R Vasquez; B C Williams; O A Graeve
Journal:  J Phys Chem B       Date:  2011-03-08       Impact factor: 2.991

8.  Development of the CHARMM Force Field for Lipids.

Authors:  R W Pastor; A D Mackerell
Journal:  J Phys Chem Lett       Date:  2011       Impact factor: 6.475

9.  MDAnalysis: a toolkit for the analysis of molecular dynamics simulations.

Authors:  Naveen Michaud-Agrawal; Elizabeth J Denning; Thomas B Woolf; Oliver Beckstein
Journal:  J Comput Chem       Date:  2011-04-15       Impact factor: 3.376

10.  How protein surfaces induce anomalous dynamics of hydration water.

Authors:  Francesco Pizzitutti; Massimo Marchi; Fabio Sterpone; Peter J Rossky
Journal:  J Phys Chem B       Date:  2007-06-12       Impact factor: 2.991

View more
  4 in total

1.  The Size of AOT Reverse Micelles.

Authors:  Gözde Eskici; Paul H Axelsen
Journal:  J Phys Chem B       Date:  2016-10-28       Impact factor: 2.991

2.  Molecular Dynamics Simulations of Amyloid β-Peptide (1-42): Tetramer Formation and Membrane Interactions.

Authors:  Anne M Brown; David R Bevan
Journal:  Biophys J       Date:  2016-09-06       Impact factor: 4.033

3.  Exploring the role of hydration and confinement in the aggregation of amyloidogenic peptides Aβ(16-22) and Sup35(7-13) in AOT reverse micelles.

Authors:  Anna Victoria Martinez; Edyta Małolepsza; Eva Rivera; Qing Lu; John E Straub
Journal:  J Chem Phys       Date:  2014-12-14       Impact factor: 3.488

4.  Role of Charge and Solvation in the Structure and Dynamics of Alanine-Rich Peptide AKA2 in AOT Reverse Micelles.

Authors:  Anna Victoria Martinez; Edyta Małolepsza; Laura Domínguez; Qing Lu; John E Straub
Journal:  J Phys Chem B       Date:  2014-11-06       Impact factor: 2.991

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.