Literature DB >> 23687275

Fe(II) oxidation is an innate capability of nitrate-reducing bacteria that involves abiotic and biotic reactions.

Hans K Carlson1, Iain C Clark, Steven J Blazewicz, Anthony T Iavarone, John D Coates.   

Abstract

Phylogenetically diverse species of bacteria can catalyze the oxidation of ferrous iron [Fe(II)] coupled to nitrate (NO(3)(-)) reduction, often referred to as nitrate-dependent iron oxidation (NDFO). Very little is known about the biochemistry of NDFO, and though growth benefits have been observed, mineral encrustations and nitrite accumulation likely limit growth. Acidovorax ebreus, like other species in the Acidovorax genus, is proficient at catalyzing NDFO. Our results suggest that the induction of specific Fe(II) oxidoreductase proteins is not required for NDFO. No upregulated periplasmic or outer membrane redox-active proteins, like those involved in Fe(II) oxidation by acidophilic iron oxidizers or anaerobic photoferrotrophs, were observed in proteomic experiments. We demonstrate that while "abiotic" extracellular reactions between Fe(II) and biogenic NO(2)(-)/NO can be involved in NDFO, intracellular reactions between Fe(II) and periplasmic components are essential to initiate extensive NDFO. We present evidence that an organic cosubstrate inhibits NDFO, likely by keeping periplasmic enzymes in their reduced state, stimulating metal efflux pumping, or both, and that growth during NDFO relies on the capacity of a nitrate-reducing bacterium to overcome the toxicity of Fe(II) and reactive nitrogen species. On the basis of our data and evidence in the literature, we postulate that all respiratory nitrate-reducing bacteria are innately capable of catalyzing NDFO. Our findings have implications for a mechanistic understanding of NDFO, the biogeochemical controls on anaerobic Fe(II) oxidation, and the production of NO(2)(-), NO, and N(2)O in the environment.

Entities:  

Mesh:

Substances:

Year:  2013        PMID: 23687275      PMCID: PMC3697641          DOI: 10.1128/JB.00058-13

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  59 in total

1.  Draft genome sequence of the anaerobic, nitrate-dependent, Fe(II)-oxidizing bacterium Pseudogulbenkiania ferrooxidans strain 2002.

Authors:  Kathryne G Byrne-Bailey; Karrie A Weber; John D Coates
Journal:  J Bacteriol       Date:  2012-05       Impact factor: 3.490

2.  Theoretical reduction potentials for nitrogen oxides from CBS-QB3 energetics and (C)PCM solvation calculations.

Authors:  Andrew S Dutton; Jon M Fukuto; Kendall N Houk
Journal:  Inorg Chem       Date:  2005-05-30       Impact factor: 5.165

3.  Microbially catalyzed nitrate-dependent oxidation of biogenic solid-phase Fe(II) compounds.

Authors:  K A Weber; F W Picardal; E E Roden
Journal:  Environ Sci Technol       Date:  2001-04-15       Impact factor: 9.028

4.  "NONOates" (1-substituted diazen-1-ium-1,2-diolates) as nitric oxide donors: convenient nitric oxide dosage forms.

Authors:  L K Keefer; R W Nims; K M Davies; D A Wink
Journal:  Methods Enzymol       Date:  1996       Impact factor: 1.600

5.  Anaerobic biooxidation of Fe(II) by Dechlorosoma suillum.

Authors:  J G Lack; S K Chaudhuri; R Chakraborty; L A Achenbach; J D Coates
Journal:  Microb Ecol       Date:  2002-04-15       Impact factor: 4.552

Review 6.  The roles of NO in microbial symbioses.

Authors:  Yanling Wang; Edward G Ruby
Journal:  Cell Microbiol       Date:  2011-02-21       Impact factor: 3.715

7.  Identification of a conserved protein involved in anaerobic unsaturated fatty acid synthesis in Neiserria gonorrhoeae: implications for facultative and obligate anaerobes that lack FabA.

Authors:  Vincent M Isabella; Virginia L Clark
Journal:  Mol Microbiol       Date:  2011-09-19       Impact factor: 3.501

8.  Ecophysiology and the energetic benefit of mixotrophic Fe(II) oxidation by various strains of nitrate-reducing bacteria.

Authors:  Eva Marie Muehe; Simone Gerhardt; Bernhard Schink; Andreas Kappler
Journal:  FEMS Microbiol Ecol       Date:  2009-08-03       Impact factor: 4.194

9.  Toward a mechanistic understanding of anaerobic nitrate-dependent iron oxidation: balancing electron uptake and detoxification.

Authors:  Hans K Carlson; Iain C Clark; Ryan A Melnyk; John D Coates
Journal:  Front Microbiol       Date:  2012-02-20       Impact factor: 5.640

Review 10.  Mass spectrometry-based label-free quantitative proteomics.

Authors:  Wenhong Zhu; Jeffrey W Smith; Chun-Ming Huang
Journal:  J Biomed Biotechnol       Date:  2009-11-10
View more
  27 in total

1.  Growth and Population Dynamics of the Anaerobic Fe(II)-Oxidizing and Nitrate-Reducing Enrichment Culture KS.

Authors:  Claudia Tominski; Helene Heyer; Tina Lösekann-Behrens; Sebastian Behrens; Andreas Kappler
Journal:  Appl Environ Microbiol       Date:  2018-04-16       Impact factor: 4.792

2.  Insights into Carbon Metabolism Provided by Fluorescence In Situ Hybridization-Secondary Ion Mass Spectrometry Imaging of an Autotrophic, Nitrate-Reducing, Fe(II)-Oxidizing Enrichment Culture.

Authors:  Claudia Tominski; Tina Lösekann-Behrens; Alexander Ruecker; Nikolas Hagemann; Sara Kleindienst; Carsten W Mueller; Carmen Höschen; Ingrid Kögel-Knabner; Andreas Kappler; Sebastian Behrens
Journal:  Appl Environ Microbiol       Date:  2018-04-16       Impact factor: 4.792

3.  Identifying and Quantifying the Intermediate Processes during Nitrate-Dependent Iron(II) Oxidation.

Authors:  James Jamieson; Henning Prommer; Anna H Kaksonen; Jing Sun; Adam J Siade; Anna Yusov; Benjamin Bostick
Journal:  Environ Sci Technol       Date:  2018-05-03       Impact factor: 9.028

4.  Coexistence of Microaerophilic, Nitrate-Reducing, and Phototrophic Fe(II) Oxidizers and Fe(III) Reducers in Coastal Marine Sediment.

Authors:  Katja Laufer; Mark Nordhoff; Hans Røy; Caroline Schmidt; Sebastian Behrens; Bo Barker Jørgensen; Andreas Kappler
Journal:  Appl Environ Microbiol       Date:  2015-12-18       Impact factor: 4.792

5.  Linking Genes to Microbial Biogeochemical Cycling: Lessons from Arsenic.

Authors:  Yong-Guan Zhu; Xi-Mei Xue; Andreas Kappler; Barry P Rosen; Andrew A Meharg
Journal:  Environ Sci Technol       Date:  2017-06-23       Impact factor: 9.028

6.  Genetic and biochemical investigations of the role of MamP in redox control of iron biomineralization in Magnetospirillum magneticum.

Authors:  Stephanie R Jones; Tiffany D Wilson; Margaret E Brown; Lilah Rahn-Lee; Yi Yu; Laura L Fredriksen; Ertan Ozyamak; Arash Komeili; Michelle C Y Chang
Journal:  Proc Natl Acad Sci U S A       Date:  2015-03-16       Impact factor: 11.205

7.  Microbially Mediated Coupling of Fe and N Cycles by Nitrate-Reducing Fe(II)-Oxidizing Bacteria in Littoral Freshwater Sediments.

Authors:  Franziska Schaedler; Cindy Lockwood; Ulf Lueder; Clemens Glombitza; Andreas Kappler; Caroline Schmidt
Journal:  Appl Environ Microbiol       Date:  2018-01-02       Impact factor: 4.792

8.  Potential role of nitrite for abiotic Fe(II) oxidation and cell encrustation during nitrate reduction by denitrifying bacteria.

Authors:  Nicole Klueglein; Fabian Zeitvogel; York-Dieter Stierhof; Matthias Floetenmeyer; Kurt O Konhauser; Andreas Kappler; Martin Obst
Journal:  Appl Environ Microbiol       Date:  2013-11-22       Impact factor: 4.792

9.  Bacillus ferrooxidans sp. nov., an iron(II)-oxidizing bacterium isolated from paddy soil.

Authors:  Guo-Wei Zhou; Xiao-Ru Yang; Jian-Qiang Su; Bang-Xiao Zheng; Yong-Guan Zhu
Journal:  J Microbiol       Date:  2018-06-14       Impact factor: 3.422

10.  Nitrate Removal by a Novel Lithoautotrophic Nitrate-Reducing, Iron(II)-Oxidizing Culture Enriched from a Pyrite-Rich Limestone Aquifer.

Authors:  Natalia Jakus; Nia Blackwell; Karsten Osenbrück; Daniel Straub; James M Byrne; Zhe Wang; David Glöckler; Martin Elsner; Tillmann Lueders; Peter Grathwohl; Sara Kleindienst; Andreas Kappler
Journal:  Appl Environ Microbiol       Date:  2021-07-27       Impact factor: 4.792

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.